data_A1H9E # _chem_comp.id A1H9E _chem_comp.name "~{tert}-butyl ~{N}-[1-[(2~{S})-1-[[(2~{R},3~{S})-4-azanyl-3-oxidanyl-4-oxidanylidene-1-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]butan-2-yl]amino]-3-cyclopropyl-1-oxidanylidene-propan-2-yl]-5-fluoranyl-2-oxidanylidene-pyridin-3-yl]carbamate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H34 F N5 O7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-04-24 _chem_comp.pdbx_modified_date 2025-01-24 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 523.554 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1H9E _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9F2V _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1H9E N1 N1 N 0 1 N N N N N N 30.626 -28.867 28.374 -1.003 1.334 0.285 N1 A1H9E 1 A1H9E N3 N2 N 0 1 N N N N N N 28.714 -26.514 30.047 2.136 -0.226 -0.866 N3 A1H9E 2 A1H9E C4 C1 C 0 1 N N N N N N 31.150 -28.881 26.004 -3.314 1.265 0.884 C4 A1H9E 3 A1H9E C5 C2 C 0 1 N N N N N N 30.261 -28.577 27.048 -2.277 1.053 -0.049 C5 A1H9E 4 A1H9E C6 C3 C 0 1 N N N N N N 31.432 -28.395 23.637 -4.986 -0.273 0.168 C6 A1H9E 5 A1H9E C7 C4 C 0 1 N N N N N N 31.342 -27.550 21.252 -6.537 -1.896 -0.641 C7 A1H9E 6 A1H9E C8 C5 C 0 1 N N N N N N 32.403 -26.483 21.527 -6.300 -2.830 0.547 C8 A1H9E 7 A1H9E C10 C6 C 0 1 N N N N N N 30.198 -26.960 20.410 -7.999 -1.993 -1.082 C10 A1H9E 8 A1H9E C13 C7 C 0 1 N N N N N N 29.845 -27.051 29.703 1.060 0.129 -0.137 C13 A1H9E 9 A1H9E C15 C8 C 0 1 N N N N N N 29.367 -31.657 30.309 0.276 4.832 -1.923 C15 A1H9E 10 A1H9E C17 C9 C 0 1 N N R N N N 28.125 -25.257 30.461 3.103 -1.186 -0.327 C17 A1H9E 11 A1H9E C20 C10 C 0 1 N N N N N N 28.800 -23.724 32.512 3.537 -3.596 0.065 C20 A1H9E 12 A1H9E C21 C11 C 0 1 N N S N N N 28.336 -24.121 28.002 4.975 0.437 -0.648 C21 A1H9E 13 A1H9E C22 C12 C 0 1 N N N N N N 27.216 -23.517 27.187 5.273 0.548 0.831 C22 A1H9E 14 A1H9E C24 C13 C 0 1 N N N N N N 29.535 -23.199 27.643 6.338 0.696 -1.331 C24 A1H9E 15 A1H9E O7 O1 O 0 1 N N N N N N 28.198 -22.742 32.158 4.688 -3.707 -0.303 O7 A1H9E 16 A1H9E N4 N3 N 0 1 N N N N N N 29.658 -23.689 33.540 3.078 -4.354 1.080 N4 A1H9E 17 A1H9E C19 C14 C 0 1 N N S N N N 28.824 -25.018 31.810 2.621 -2.610 -0.613 C19 A1H9E 18 A1H9E O6 O2 O 0 1 N N N N N N 29.163 -25.970 32.806 1.292 -2.773 -0.114 O6 A1H9E 19 A1H9E C18 C15 C 0 1 N N N N N N 28.160 -24.030 29.521 4.465 -0.965 -0.988 C18 A1H9E 20 A1H9E C23 C16 C 0 1 N N N N N N 29.099 -22.232 26.550 7.330 0.291 -0.218 C23 A1H9E 21 A1H9E N5 N4 N 0 1 N N N N N N 27.664 -22.475 26.487 6.598 0.469 1.042 N5 A1H9E 22 A1H9E O5 O3 O 0 1 N N N N N N 26.088 -23.940 27.167 4.438 0.689 1.699 O5 A1H9E 23 A1H9E O4 O4 O 0 1 N N N N N N 30.907 -26.525 29.598 0.891 -0.346 0.966 O4 A1H9E 24 A1H9E C11 C17 C 0 1 N N S N N N 29.684 -28.524 29.452 0.066 1.117 -0.692 C11 A1H9E 25 A1H9E C12 C18 C 0 1 N N N N N N 29.949 -29.236 30.780 0.772 2.444 -0.980 C12 A1H9E 26 A1H9E C14 C19 C 0 1 N N N N N N 28.982 -30.400 30.995 -0.206 3.405 -1.658 C14 A1H9E 27 A1H9E C16 C20 C 0 1 N N N N N N 29.531 -31.575 31.823 0.117 3.851 -3.085 C16 A1H9E 28 A1H9E O2 O5 O 0 1 N N N N N N 29.146 -28.065 26.812 -2.535 0.614 -1.159 O2 A1H9E 29 A1H9E C3 C21 C 0 1 N N N N N N 32.415 -29.420 26.289 -3.008 1.758 2.123 C3 A1H9E 30 A1H9E C2 C22 C 0 1 N N N N N N 32.760 -29.651 27.616 -1.669 2.035 2.439 C2 A1H9E 31 A1H9E F1 F1 F 0 1 N N N N N N 33.952 -30.191 27.973 -1.349 2.522 3.658 F1 A1H9E 32 A1H9E C1 C23 C 0 1 N N N N N N 31.857 -29.361 28.624 -0.699 1.825 1.518 C1 A1H9E 33 A1H9E N2 N5 N 0 1 N N N N N N 30.700 -28.540 24.731 -4.644 0.975 0.545 N2 A1H9E 34 A1H9E O3 O6 O 0 1 N N N N N N 32.629 -28.605 23.561 -4.162 -1.166 0.204 O3 A1H9E 35 A1H9E O1 O7 O 0 1 N N N N N N 30.729 -27.968 22.467 -6.240 -0.530 -0.250 O1 A1H9E 36 A1H9E C9 C24 C 0 1 N N N N N N 31.996 -28.793 20.613 -5.627 -2.304 -1.801 C9 A1H9E 37 A1H9E H2 H1 H 0 1 N N N N N N 27.999 -27.213 30.015 2.271 0.154 -1.748 H2 A1H9E 38 A1H9E H83 H2 H 0 1 N N N N N N 32.866 -26.172 20.579 -6.949 -2.539 1.373 H83 A1H9E 39 A1H9E H81 H3 H 0 1 N N N N N N 31.932 -25.613 22.008 -6.523 -3.856 0.253 H81 A1H9E 40 A1H9E H82 H4 H 0 1 N N N N N N 33.175 -26.897 22.193 -5.259 -2.761 0.861 H82 A1H9E 41 A1H9E H101 H5 H 0 0 N N N N N N 30.595 -26.611 19.445 -8.168 -1.328 -1.929 H101 A1H9E 42 A1H9E H103 H6 H 0 0 N N N N N N 29.435 -27.733 20.235 -8.223 -3.019 -1.376 H103 A1H9E 43 A1H9E H102 H7 H 0 0 N N N N N N 29.745 -26.114 20.948 -8.648 -1.702 -0.256 H102 A1H9E 44 A1H9E H152 H8 H 0 0 N N N N N N 28.589 -32.304 29.879 -0.457 5.635 -1.838 H152 A1H9E 45 A1H9E H151 H9 H 0 0 N N N N N N 30.258 -31.676 29.664 1.290 5.087 -1.614 H151 A1H9E 46 A1H9E H17 H10 H 0 1 N N N N N N 27.065 -25.446 30.687 3.194 -1.043 0.750 H17 A1H9E 47 A1H9E H21 H11 H 0 1 N N N N N N 28.539 -25.157 27.692 4.246 1.190 -0.948 H21 A1H9E 48 A1H9E H242 H12 H 0 0 N N N N N N 29.847 -22.634 28.534 6.460 0.065 -2.211 H242 A1H9E 49 A1H9E H241 H13 H 0 0 N N N N N N 30.376 -23.809 27.283 6.450 1.749 -1.590 H241 A1H9E 50 A1H9E HN42 H14 H 0 0 N N N N N N 29.812 -22.833 34.034 3.685 -4.936 1.564 HN42 A1H9E 51 A1H9E HN41 H15 H 0 0 N N N N N N 30.145 -24.519 33.813 2.141 -4.318 1.326 HN41 A1H9E 52 A1H9E H19 H16 H 0 1 N N N N N N 29.837 -24.909 31.395 2.630 -2.786 -1.689 H19 A1H9E 53 A1H9E HO6 H17 H 0 1 N N N N N N 29.588 -25.531 33.533 0.647 -2.169 -0.508 HO6 A1H9E 54 A1H9E H182 H18 H 0 0 N N N N N N 27.207 -23.505 29.680 5.172 -1.708 -0.619 H182 A1H9E 55 A1H9E H181 H19 H 0 0 N N N N N N 28.989 -23.402 29.880 4.364 -1.064 -2.069 H181 A1H9E 56 A1H9E H231 H20 H 0 0 N N N N N N 29.587 -22.465 25.592 7.626 -0.751 -0.338 H231 A1H9E 57 A1H9E H232 H21 H 0 0 N N N N N N 29.316 -21.190 26.828 8.207 0.937 -0.241 H232 A1H9E 58 A1H9E H4 H22 H 0 1 N N N N N N 27.051 -21.895 25.950 7.017 0.522 1.915 H4 A1H9E 59 A1H9E H11 H23 H 0 1 N N N N N N 28.653 -28.732 29.130 -0.359 0.724 -1.615 H11 A1H9E 60 A1H9E H121 H24 H 0 0 N N N N N N 30.979 -29.623 30.779 1.121 2.880 -0.044 H121 A1H9E 61 A1H9E H122 H25 H 0 0 N N N N N N 29.829 -28.515 31.602 1.623 2.267 -1.637 H122 A1H9E 62 A1H9E H14 H26 H 0 1 N N N N N N 27.913 -30.163 31.098 -1.256 3.268 -1.398 H14 A1H9E 63 A1H9E H161 H27 H 0 0 N N N N N N 30.534 -31.518 32.271 -0.720 4.007 -3.765 H161 A1H9E 64 A1H9E H162 H28 H 0 0 N N N N N N 28.865 -32.147 32.486 1.026 3.459 -3.541 H162 A1H9E 65 A1H9E H3 H29 H 0 1 N N N N N N 33.107 -29.651 25.492 -3.787 1.927 2.852 H3 A1H9E 66 A1H9E H1 H30 H 0 1 N N N N N N 32.148 -29.537 29.649 0.329 2.048 1.764 H1 A1H9E 67 A1H9E H5 H31 H 0 1 N N N N N N 29.717 -28.388 24.632 -5.317 1.672 0.583 H5 A1H9E 68 A1H9E H93 H32 H 0 1 N N N N N N 32.482 -28.508 19.668 -4.585 -2.235 -1.486 H93 A1H9E 69 A1H9E H91 H33 H 0 1 N N N N N N 32.748 -29.206 21.301 -5.850 -3.330 -2.095 H91 A1H9E 70 A1H9E H92 H34 H 0 1 N N N N N N 31.225 -29.552 20.414 -5.796 -1.639 -2.647 H92 A1H9E 71 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1H9E N1 C1 SING N N 1 A1H9E C5 N1 SING N N 2 A1H9E N1 C11 SING N N 3 A1H9E C1 C2 DOUB N N 4 A1H9E C2 C3 SING N N 5 A1H9E F1 C2 SING N N 6 A1H9E C3 C4 DOUB N N 7 A1H9E C4 C5 SING N N 8 A1H9E N2 C4 SING N N 9 A1H9E O2 C5 DOUB N N 10 A1H9E C6 N2 SING N N 11 A1H9E O1 C6 SING N N 12 A1H9E O3 C6 DOUB N N 13 A1H9E C7 O1 SING N N 14 A1H9E C8 C7 SING N N 15 A1H9E C9 C7 SING N N 16 A1H9E C10 C7 SING N N 17 A1H9E C12 C11 SING N N 18 A1H9E C11 C13 SING N N 19 A1H9E C14 C12 SING N N 20 A1H9E O4 C13 DOUB N N 21 A1H9E C13 N3 SING N N 22 A1H9E C14 C15 SING N N 23 A1H9E C16 C14 SING N N 24 A1H9E C15 C16 SING N N 25 A1H9E N3 C17 SING N N 26 A1H9E C18 C17 SING N N 27 A1H9E C17 C19 SING N N 28 A1H9E C21 C18 SING N N 29 A1H9E C19 C20 SING N N 30 A1H9E O6 C19 SING N N 31 A1H9E N4 C20 SING N N 32 A1H9E C20 O7 DOUB N N 33 A1H9E C21 C22 SING N N 34 A1H9E C24 C21 SING N N 35 A1H9E C22 N5 SING N N 36 A1H9E O5 C22 DOUB N N 37 A1H9E N5 C23 SING N N 38 A1H9E C23 C24 SING N N 39 A1H9E N3 H2 SING N N 40 A1H9E C8 H83 SING N N 41 A1H9E C8 H81 SING N N 42 A1H9E C8 H82 SING N N 43 A1H9E C10 H101 SING N N 44 A1H9E C10 H103 SING N N 45 A1H9E C10 H102 SING N N 46 A1H9E C15 H152 SING N N 47 A1H9E C15 H151 SING N N 48 A1H9E C17 H17 SING N N 49 A1H9E C21 H21 SING N N 50 A1H9E C24 H242 SING N N 51 A1H9E C24 H241 SING N N 52 A1H9E N4 HN42 SING N N 53 A1H9E N4 HN41 SING N N 54 A1H9E C19 H19 SING N N 55 A1H9E O6 HO6 SING N N 56 A1H9E C18 H182 SING N N 57 A1H9E C18 H181 SING N N 58 A1H9E C23 H231 SING N N 59 A1H9E C23 H232 SING N N 60 A1H9E N5 H4 SING N N 61 A1H9E C11 H11 SING N N 62 A1H9E C12 H121 SING N N 63 A1H9E C12 H122 SING N N 64 A1H9E C14 H14 SING N N 65 A1H9E C16 H161 SING N N 66 A1H9E C16 H162 SING N N 67 A1H9E C3 H3 SING N N 68 A1H9E C1 H1 SING N N 69 A1H9E N2 H5 SING N N 70 A1H9E C9 H93 SING N N 71 A1H9E C9 H91 SING N N 72 A1H9E C9 H92 SING N N 73 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1H9E InChI InChI 1.06 "InChI=1S/C24H34FN5O7/c1-24(2,3)37-23(36)29-16-10-14(25)11-30(22(16)35)17(8-12-4-5-12)21(34)28-15(18(31)19(26)32)9-13-6-7-27-20(13)33/h10-13,15,17-18,31H,4-9H2,1-3H3,(H2,26,32)(H,27,33)(H,28,34)(H,29,36)/t13-,15+,17-,18-/m0/s1" A1H9E InChIKey InChI 1.06 VPOIUZYOJSCRKL-DHXZDTOLSA-N A1H9E SMILES_CANONICAL CACTVS 3.385 "CC(C)(C)OC(=O)NC1=CC(=CN([C@@H](CC2CC2)C(=O)N[C@H](C[C@@H]3CCNC3=O)[C@H](O)C(N)=O)C1=O)F" A1H9E SMILES CACTVS 3.385 "CC(C)(C)OC(=O)NC1=CC(=CN([CH](CC2CC2)C(=O)N[CH](C[CH]3CCNC3=O)[CH](O)C(N)=O)C1=O)F" A1H9E SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)(C)OC(=O)NC1=CC(=CN(C1=O)[C@@H](CC2CC2)C(=O)N[C@H](C[C@@H]3CCNC3=O)[C@@H](C(=O)N)O)F" A1H9E SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)(C)OC(=O)NC1=CC(=CN(C1=O)C(CC2CC2)C(=O)NC(CC3CCNC3=O)C(C(=O)N)O)F" # _pdbx_chem_comp_identifier.comp_id A1H9E _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{tert}-butyl ~{N}-[1-[(2~{S})-1-[[(2~{R},3~{S})-4-azanyl-3-oxidanyl-4-oxidanylidene-1-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]butan-2-yl]amino]-3-cyclopropyl-1-oxidanylidene-propan-2-yl]-5-fluoranyl-2-oxidanylidene-pyridin-3-yl]carbamate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1H9E "Create component" 2024-04-24 PDBE A1H9E "Modify PCM" 2024-09-27 PDBE A1H9E "Initial release" 2025-01-29 RCSB # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id A1H9E _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C19 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #