data_A1H9L # _chem_comp.id A1H9L _chem_comp.name difluorocholine _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C5 H12 F2 N" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ;2-DEOXY-2-FLUOROHEXOPYRANOSYL FLUORIDE; 2-DEOXY-2-FLUORO-ALPHA-D-MANNOSYL FLUORIDE; 2-deoxy-2-fluoro-beta-D-mannosyl fluoride; 2-deoxy-2-fluoro-D-mannosyl fluoride; 2-deoxy-2-fluoro-mannosyl fluoride ; _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2024-04-26 _chem_comp.pdbx_modified_date 2024-05-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 124.152 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1H9L _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9F3Y _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1H9L C5 C1 C 0 1 N N N N N N 1.430 2.471 -2.495 -1.956 0.345 -0.000 C5 A1H9L 1 A1H9L C2 C2 C 0 1 N N N N N N -0.536 1.996 -0.993 1.582 -0.909 0.000 C2 A1H9L 2 A1H9L C4 C3 C 0 1 N N N N N N 1.679 1.366 -1.471 -0.804 -0.662 0.000 C4 A1H9L 3 A1H9L F1 F1 F 0 1 N N N N N N -1.564 2.012 -0.105 2.801 -0.223 0.000 F1 A1H9L 4 A1H9L C7 C4 C 0 1 N N N N N N 0.630 0.264 0.349 0.564 0.902 1.199 C7 A1H9L 5 A1H9L C8 C5 C 0 1 N N N N N N 1.187 2.559 0.536 0.564 0.901 -1.200 C8 A1H9L 6 A1H9L F6 F2 F 0 1 N N N N N N 1.795 3.683 -1.928 -3.175 -0.341 0.000 F6 A1H9L 7 A1H9L N3 N1 N 1 1 N N N N N N 0.727 1.538 -0.379 0.476 0.058 -0.000 N3 A1H9L 8 A1H9L H51 H1 H 0 1 N N N N N N 2.033 2.286 -3.396 -1.891 0.971 0.890 H51 A1H9L 9 A1H9L H52 H2 H 0 1 N N N N N N 0.364 2.493 -2.766 -1.891 0.970 -0.890 H52 A1H9L 10 A1H9L H22 H3 H 0 1 N N N N N N -0.793 1.318 -1.820 1.517 -1.536 -0.889 H22 A1H9L 11 A1H9L H21 H4 H 0 1 N N N N N N -0.391 3.014 -1.384 1.517 -1.535 0.891 H21 A1H9L 12 A1H9L H41 H5 H 0 1 N N N N N N 2.706 1.440 -1.085 -0.869 -1.288 0.891 H41 A1H9L 13 A1H9L H42 H6 H 0 1 N N N N N N 1.534 0.382 -1.941 -0.869 -1.289 -0.889 H42 A1H9L 14 A1H9L H71 H7 H 0 1 N N N N N N 1.613 0.005 0.769 1.514 1.436 1.199 H71 A1H9L 15 A1H9L H72 H8 H 0 1 N N N N N N -0.102 0.362 1.164 -0.257 1.620 1.199 H72 A1H9L 16 A1H9L H73 H9 H 0 1 N N N N N N 0.306 -0.529 -0.341 0.499 0.276 2.089 H73 A1H9L 17 A1H9L H83 H10 H 0 1 N N N N N N 2.128 2.235 1.004 0.499 0.275 -2.089 H83 A1H9L 18 A1H9L H82 H11 H 0 1 N N N N N N 1.355 3.496 -0.015 -0.257 1.619 -1.200 H82 A1H9L 19 A1H9L H81 H12 H 0 1 N N N N N N 0.428 2.722 1.315 1.514 1.435 -1.200 H81 A1H9L 20 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1H9L F1 C2 SING N N 1 A1H9L C2 N3 SING N N 2 A1H9L N3 C4 SING N N 3 A1H9L C4 C5 SING N N 4 A1H9L C5 F6 SING N N 5 A1H9L C7 N3 SING N N 6 A1H9L C8 N3 SING N N 7 A1H9L C5 H51 SING N N 8 A1H9L C5 H52 SING N N 9 A1H9L C2 H22 SING N N 10 A1H9L C2 H21 SING N N 11 A1H9L C4 H41 SING N N 12 A1H9L C4 H42 SING N N 13 A1H9L C7 H71 SING N N 14 A1H9L C7 H72 SING N N 15 A1H9L C7 H73 SING N N 16 A1H9L C8 H83 SING N N 17 A1H9L C8 H82 SING N N 18 A1H9L C8 H81 SING N N 19 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1H9L InChI InChI 1.06 "InChI=1S/C5H12F2N/c1-8(2,5-7)4-3-6/h3-5H2,1-2H3/q+1" A1H9L InChIKey InChI 1.06 YOGYDOVCYPFAGS-UHFFFAOYSA-N A1H9L SMILES_CANONICAL CACTVS 3.385 "C[N+](C)(CF)CCF" A1H9L SMILES CACTVS 3.385 "C[N+](C)(CF)CCF" A1H9L SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[N+](C)(CCF)CF" A1H9L SMILES "OpenEye OEToolkits" 2.0.7 "C[N+](C)(CCF)CF" # _pdbx_chem_comp_identifier.comp_id A1H9L _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-fluoranylethyl-(fluoranylmethyl)-dimethyl-azanium" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1H9L "Create component" 2024-04-26 PDBE A1H9L "Initial release" 2024-05-08 RCSB #