data_A1H9N # _chem_comp.id A1H9N _chem_comp.name "N-[2-[(1R,2S)-2-[[(2S,5S)-2-(6-azanylpyridin-3-yl)-5-methyl-morpholin-4-yl]methyl]cyclopropyl]ethyl]-1H-indole-2-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H31 N5 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-04-26 _chem_comp.pdbx_modified_date 2024-09-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 433.546 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1H9N _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9F33 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1H9N C1 C1 C 0 1 N N N N N N 127.148 133.587 137.757 4.904 3.328 0.299 C1 A1H9N 1 A1H9N C10 C2 C 0 1 N N N N N N 129.841 135.130 136.468 4.146 0.586 -0.185 C10 A1H9N 2 A1H9N C11 C3 C 0 1 N N N N N N 129.855 132.960 137.540 2.280 2.111 0.066 C11 A1H9N 3 A1H9N C12 C4 C 0 1 N N S N N N 129.871 131.489 137.243 1.245 0.985 0.097 C12 A1H9N 4 A1H9N C13 C5 C 0 1 N N N N N N 130.776 130.970 136.154 0.973 0.311 1.443 C13 A1H9N 5 A1H9N C14 C6 C 0 1 N N R N N N 131.096 130.686 137.598 -0.068 1.253 0.834 C14 A1H9N 6 A1H9N C15 C7 C 0 1 N N N N N N 130.977 129.277 138.132 -1.341 0.624 0.263 C15 A1H9N 7 A1H9N C16 C8 C 0 1 N N N N N N 131.167 129.235 139.630 -2.552 1.108 1.062 C16 A1H9N 8 A1H9N C17 C9 C 0 1 N N N N N N 132.644 127.607 140.662 -4.968 0.790 1.064 C17 A1H9N 9 A1H9N C18 C10 C 0 1 Y N N N N N 132.694 126.485 141.603 -6.191 0.186 0.515 C18 A1H9N 10 A1H9N C19 C11 C 0 1 Y N N N N N 131.957 125.334 141.691 -7.451 0.395 0.981 C19 A1H9N 11 A1H9N C2 C12 C 0 1 N N S N N N 127.827 133.823 136.416 4.312 2.849 -1.028 C2 A1H9N 12 A1H9N C20 C13 C 0 1 Y N N N N N 132.428 124.618 142.819 -8.337 -0.366 0.181 C20 A1H9N 13 A1H9N C21 C14 C 0 1 Y N N N N N 132.098 123.394 143.424 -9.727 -0.544 0.188 C21 A1H9N 14 A1H9N C22 C15 C 0 1 Y N N N N N 132.782 123.001 144.548 -10.311 -1.364 -0.733 C22 A1H9N 15 A1H9N C23 C16 C 0 1 Y N N N N N 133.791 123.791 145.094 -9.540 -2.026 -1.681 C23 A1H9N 16 A1H9N C24 C17 C 0 1 Y N N N N N 134.145 124.997 144.535 -8.172 -1.867 -1.708 C24 A1H9N 17 A1H9N C25 C18 C 0 1 Y N N N N N 133.457 125.401 143.396 -7.553 -1.036 -0.779 C25 A1H9N 18 A1H9N C3 C19 C 0 1 N N N N N N 127.360 135.138 135.801 5.442 2.405 -1.962 C3 A1H9N 19 A1H9N C4 C20 C 0 1 N N S N N N 129.540 135.812 135.141 5.278 0.166 -1.127 C4 A1H9N 20 A1H9N C5 C21 C 0 1 Y N N N N N 129.732 137.309 135.166 6.083 -0.935 -0.485 C5 A1H9N 21 A1H9N C6 C22 C 0 1 Y N N N N N 129.073 138.123 134.255 5.876 -2.259 -0.850 C6 A1H9N 22 A1H9N C7 C23 C 0 1 Y N N N N N 129.265 139.492 134.282 6.636 -3.239 -0.238 C7 A1H9N 23 A1H9N C8 C24 C 0 1 Y N N N N N 130.134 140.032 135.233 7.576 -2.867 0.718 C8 A1H9N 24 A1H9N C9 C25 C 0 1 Y N N N N N 130.582 137.917 136.077 7.036 -0.637 0.467 C9 A1H9N 25 A1H9N N1 N1 N 0 1 N N N N N N 130.362 141.353 135.309 8.347 -3.842 1.342 N1 A1H9N 26 A1H9N N2 N2 N 0 1 Y N N N N N 130.785 139.244 136.121 7.744 -1.594 1.039 N2 A1H9N 27 A1H9N N3 N3 N 0 1 N N N N N N 129.307 133.776 136.450 3.412 1.712 -0.781 N3 A1H9N 28 A1H9N N4 N4 N 0 1 N N N N N N 131.461 127.904 140.125 -3.771 0.506 0.515 N4 A1H9N 29 A1H9N N5 N5 N 0 1 Y N N N N N 133.595 126.534 142.641 -6.244 -0.679 -0.560 N5 A1H9N 30 A1H9N O1 O1 O 0 1 N N N N N N 128.206 135.546 134.720 6.124 1.291 -1.379 O1 A1H9N 31 A1H9N O2 O2 O 0 1 N N N N N N 133.647 128.275 140.413 -5.037 1.547 2.015 O2 A1H9N 32 A1H9N H1 H1 H 0 1 N N N N N N 127.498 132.635 138.183 5.464 2.516 0.762 H1 A1H9N 33 A1H9N H2 H2 H 0 1 N N N N N N 127.397 134.410 138.444 5.571 4.171 0.116 H2 A1H9N 34 A1H9N H3 H3 H 0 1 N N N N N N 126.058 133.546 137.614 4.099 3.640 0.964 H3 A1H9N 35 A1H9N H4 H4 H 0 1 N N N N N N 130.929 135.093 136.623 3.467 -0.252 -0.035 H4 A1H9N 36 A1H9N H5 H5 H 0 1 N N N N N N 129.374 135.698 137.286 4.565 0.892 0.774 H5 A1H9N 37 A1H9N H6 H6 H 0 1 N N N N N N 130.888 133.287 137.733 1.824 3.014 -0.338 H6 A1H9N 38 A1H9N H7 H7 H 0 1 N N N N N N 129.244 133.126 138.439 2.635 2.305 1.078 H7 A1H9N 39 A1H9N H8 H8 H 0 1 N N N N N N 128.909 130.967 137.353 1.202 0.361 -0.796 H8 A1H9N 40 A1H9N H9 H9 H 0 1 N N N N N N 130.435 130.157 135.496 0.751 -0.756 1.436 H9 A1H9N 41 A1H9N H10 H10 H 0 1 N N N N N N 131.402 131.669 135.579 1.531 0.670 2.307 H10 A1H9N 42 A1H9N H11 H11 H 0 1 N N N N N N 131.931 131.270 138.013 -0.195 2.231 1.298 H11 A1H9N 43 A1H9N H12 H12 H 0 1 N N N N N N 129.979 128.885 137.887 -1.454 0.918 -0.781 H12 A1H9N 44 A1H9N H13 H13 H 0 1 N N N N N N 131.744 128.649 137.657 -1.272 -0.461 0.330 H13 A1H9N 45 A1H9N H14 H14 H 0 1 N N N N N N 132.001 129.901 139.897 -2.440 0.815 2.106 H14 A1H9N 46 A1H9N H15 H15 H 0 1 N N N N N N 130.244 129.592 140.111 -2.622 2.194 0.996 H15 A1H9N 47 A1H9N H16 H16 H 0 1 N N N N N N 131.164 125.029 141.024 -7.726 1.027 1.812 H16 A1H9N 48 A1H9N H17 H17 H 0 1 N N N N N N 127.490 133.021 135.743 3.753 3.661 -1.492 H17 A1H9N 49 A1H9N H18 H18 H 0 1 N N N N N N 131.318 122.771 143.011 -10.334 -0.035 0.921 H18 A1H9N 50 A1H9N H19 H19 H 0 1 N N N N N N 132.533 122.061 145.018 -11.382 -1.500 -0.726 H19 A1H9N 51 A1H9N H20 H20 H 0 1 N N N N N N 134.308 123.448 145.978 -10.017 -2.671 -2.403 H20 A1H9N 52 A1H9N H21 H21 H 0 1 N N N N N N 134.927 125.606 144.964 -7.582 -2.386 -2.448 H21 A1H9N 53 A1H9N H22 H22 H 0 1 N N N N N N 127.371 135.918 136.576 5.025 2.113 -2.925 H22 A1H9N 54 A1H9N H23 H23 H 0 1 N N N N N N 126.335 135.011 135.423 6.142 3.228 -2.102 H23 A1H9N 55 A1H9N H24 H24 H 0 1 N N N N N N 130.234 135.400 134.394 4.856 -0.192 -2.066 H24 A1H9N 56 A1H9N H25 H25 H 0 1 N N N N N N 128.409 137.686 133.524 5.139 -2.518 -1.596 H25 A1H9N 57 A1H9N H26 H26 H 0 1 N N N N N N 128.752 140.133 133.580 6.501 -4.279 -0.498 H26 A1H9N 58 A1H9N H27 H27 H 0 1 N N N N N N 131.106 137.293 136.786 7.203 0.391 0.751 H27 A1H9N 59 A1H9N H28 H28 H 0 1 N N N N N N 131.009 141.538 136.049 8.228 -4.776 1.110 H28 A1H9N 60 A1H9N H29 H29 H 0 1 N N N N N N 130.745 141.675 134.443 9.004 -3.587 2.009 H29 A1H9N 61 A1H9N H31 H31 H 0 1 N N N N N N 130.760 127.193 140.062 -3.716 -0.097 -0.243 H31 A1H9N 62 A1H9N H32 H32 H 0 1 N N N N N N 134.244 127.275 142.815 -5.481 -0.987 -1.076 H32 A1H9N 63 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1H9N C6 C7 DOUB Y N 1 A1H9N C6 C5 SING Y N 2 A1H9N C7 C8 SING Y N 3 A1H9N O1 C4 SING N N 4 A1H9N O1 C3 SING N N 5 A1H9N C4 C5 SING N N 6 A1H9N C4 C10 SING N N 7 A1H9N C5 C9 DOUB Y N 8 A1H9N C8 N1 SING N N 9 A1H9N C8 N2 DOUB Y N 10 A1H9N C3 C2 SING N N 11 A1H9N C9 N2 SING Y N 12 A1H9N C13 C12 SING N N 13 A1H9N C13 C14 SING N N 14 A1H9N C2 N3 SING N N 15 A1H9N C2 C1 SING N N 16 A1H9N N3 C10 SING N N 17 A1H9N N3 C11 SING N N 18 A1H9N C12 C11 SING N N 19 A1H9N C12 C14 SING N N 20 A1H9N C14 C15 SING N N 21 A1H9N C15 C16 SING N N 22 A1H9N C16 N4 SING N N 23 A1H9N N4 C17 SING N N 24 A1H9N O2 C17 DOUB N N 25 A1H9N C17 C18 SING N N 26 A1H9N C18 C19 DOUB Y N 27 A1H9N C18 N5 SING Y N 28 A1H9N C19 C20 SING Y N 29 A1H9N N5 C25 SING Y N 30 A1H9N C20 C25 DOUB Y N 31 A1H9N C20 C21 SING Y N 32 A1H9N C25 C24 SING Y N 33 A1H9N C21 C22 DOUB Y N 34 A1H9N C24 C23 DOUB Y N 35 A1H9N C22 C23 SING Y N 36 A1H9N C1 H1 SING N N 37 A1H9N C1 H2 SING N N 38 A1H9N C1 H3 SING N N 39 A1H9N C10 H4 SING N N 40 A1H9N C10 H5 SING N N 41 A1H9N C11 H6 SING N N 42 A1H9N C11 H7 SING N N 43 A1H9N C12 H8 SING N N 44 A1H9N C13 H9 SING N N 45 A1H9N C13 H10 SING N N 46 A1H9N C14 H11 SING N N 47 A1H9N C15 H12 SING N N 48 A1H9N C15 H13 SING N N 49 A1H9N C16 H14 SING N N 50 A1H9N C16 H15 SING N N 51 A1H9N C19 H16 SING N N 52 A1H9N C2 H17 SING N N 53 A1H9N C21 H18 SING N N 54 A1H9N C22 H19 SING N N 55 A1H9N C23 H20 SING N N 56 A1H9N C24 H21 SING N N 57 A1H9N C3 H22 SING N N 58 A1H9N C3 H23 SING N N 59 A1H9N C4 H24 SING N N 60 A1H9N C6 H25 SING N N 61 A1H9N C7 H26 SING N N 62 A1H9N C9 H27 SING N N 63 A1H9N N1 H28 SING N N 64 A1H9N N1 H29 SING N N 65 A1H9N N4 H31 SING N N 66 A1H9N N5 H32 SING N N 67 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1H9N InChI InChI 1.06 "InChI=1S/C25H31N5O2/c1-16-15-32-23(19-6-7-24(26)28-12-19)14-30(16)13-20-10-17(20)8-9-27-25(31)22-11-18-4-2-3-5-21(18)29-22/h2-7,11-12,16-17,20,23,29H,8-10,13-15H2,1H3,(H2,26,28)(H,27,31)/t16-,17-,20+,23+/m0/s1" A1H9N InChIKey InChI 1.06 JQBHQHNVJCDNEL-SLHLXQHXSA-N A1H9N SMILES_CANONICAL CACTVS 3.385 "C[C@H]1CO[C@H](CN1C[C@H]2C[C@@H]2CCNC(=O)c3[nH]c4ccccc4c3)c5ccc(N)nc5" A1H9N SMILES CACTVS 3.385 "C[CH]1CO[CH](CN1C[CH]2C[CH]2CCNC(=O)c3[nH]c4ccccc4c3)c5ccc(N)nc5" A1H9N SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H]1CO[C@H](CN1C[C@H]2C[C@@H]2CCNC(=O)c3cc4ccccc4[nH]3)c5ccc(nc5)N" A1H9N SMILES "OpenEye OEToolkits" 2.0.7 "CC1COC(CN1CC2CC2CCNC(=O)c3cc4ccccc4[nH]3)c5ccc(nc5)N" # _pdbx_chem_comp_identifier.comp_id A1H9N _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[2-[(1~{R},2~{S})-2-[[(2~{S},5~{S})-2-(6-azanylpyridin-3-yl)-5-methyl-morpholin-4-yl]methyl]cyclopropyl]ethyl]-1~{H}-indole-2-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1H9N "Create component" 2024-04-26 PDBE A1H9N "Initial release" 2024-09-18 RCSB #