data_A1I0L # _chem_comp.id A1I0L _chem_comp.name "methyl 2-acetamido-2-deoxy-6-fluoro-6-deoxy-beta-D-glucopyranoside" _chem_comp.type D-saccharide _chem_comp.pdbx_type ATOMS _chem_comp.formula "C9 H16 F N O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "methyl 2-acetamido-2-deoxy-6-fluoro-6-deoxy-beta-D-glucoside; methyl 2-acetamido-2-deoxy-6-fluoro-6-deoxy-D-glucoside; methyl 2-acetamido-2-deoxy-6-fluoro-6-deoxy-glucoside; N-[(2R,3R,4R,5S,6S)-6-(fluoranylmethyl)-2-methoxy-4,5-bis(oxidanyl)oxan-3-yl]ethanamide" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-01-30 _chem_comp.pdbx_modified_date 2026-02-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 237.225 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1I0L _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9I4N _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1I0L N2 N1 N 0 1 N N N N N N -25.278 -10.935 -1.242 2.095 0.664 0.476 N2 A1I0L 1 A1I0L C3 C1 C 0 1 N N R N N N -23.050 -10.479 -0.366 -0.165 1.590 0.312 C3 A1I0L 2 A1I0L C2 C2 C 0 1 N N R N N N -24.544 -10.565 -0.071 0.774 0.463 -0.126 C2 A1I0L 3 A1I0L C1 C3 C 0 1 N N R N N N -24.779 -11.587 1.053 0.200 -0.878 0.338 C1 A1I0L 4 A1I0L CM C4 C 0 1 N N N N N N -26.552 -12.699 2.168 0.658 -3.231 0.360 CM A1I0L 5 A1I0L C8 C5 C 0 1 N N N N N N -27.141 -10.952 -2.748 4.549 0.358 0.502 C8 A1I0L 6 A1I0L C4 C6 C 0 1 N N S N N N -22.338 -10.117 0.907 -1.562 1.327 -0.259 C4 A1I0L 7 A1I0L O4 O1 O 0 1 N N N N N N -20.922 -10.100 0.710 -2.464 2.334 0.202 O4 A1I0L 8 A1I0L O5 O2 O 0 1 N N N N N N -24.059 -11.168 2.199 -1.111 -1.046 -0.204 O5 A1I0L 9 A1I0L C5 C7 C 0 1 N N S N N N -22.642 -11.148 2.024 -2.046 -0.047 0.210 C5 A1I0L 10 A1I0L O3 O3 O 0 1 N N N N N N -22.746 -9.548 -1.394 0.325 2.839 -0.180 O3 A1I0L 11 A1I0L O1 O4 O 0 1 N N N N N N -26.149 -11.590 1.340 1.043 -1.940 -0.116 O1 A1I0L 12 A1I0L C6 C8 C 0 1 N N N N N N -22.034 -10.801 3.371 -3.415 -0.344 -0.406 C6 A1I0L 13 A1I0L F6 F6 F 0 1 N N N N N N -22.358 -9.569 3.747 -3.908 -1.546 0.111 F1 A1I0L 14 A1I0L C7 C9 C 0 1 N N N N N N -26.449 -10.371 -1.563 3.191 0.151 -0.117 C7 A1I0L 15 A1I0L O7 O6 O 0 1 N N N N N N -26.916 -9.428 -0.934 3.084 -0.478 -1.148 O7 A1I0L 16 A1I0L HN2 H1 H 0 1 N N N N N N -24.903 -11.641 -1.843 2.181 1.171 1.298 HN2 A1I0L 17 A1I0L H3 H2 H 0 1 N N N N N N -22.711 -11.479 -0.673 -0.216 1.621 1.400 H3 A1I0L 18 A1I0L H2 H3 H 0 1 N N N N N N -24.885 -9.581 0.283 0.865 0.465 -1.212 H2 A1I0L 19 A1I0L H1 H4 H 0 1 N N N N N N -24.441 -12.578 0.717 0.149 -0.895 1.427 H1 A1I0L 20 A1I0L HM1 H5 H 0 1 N N N N N N -27.634 -12.643 2.356 0.687 -3.241 1.449 HM1 A1I0L 21 A1I0L HM2 H6 H 0 1 N N N N N N -26.317 -13.643 1.655 -0.354 -3.456 0.021 HM2 A1I0L 22 A1I0L HM3 H7 H 0 1 N N N N N N -26.012 -12.657 3.125 1.346 -3.982 -0.028 HM3 A1I0L 23 A1I0L H81 H8 H 0 1 N N N N N N -28.079 -10.407 -2.929 4.763 -0.458 1.192 H81 A1I0L 24 A1I0L H82 H9 H 0 1 N N N N N N -26.491 -10.865 -3.631 5.306 0.379 -0.282 H82 A1I0L 25 A1I0L H83 H10 H 0 1 N N N N N N -27.363 -12.013 -2.559 4.561 1.304 1.044 H83 A1I0L 26 A1I0L H4 H11 H 0 1 N N N N N N -22.684 -9.128 1.243 -1.520 1.346 -1.349 H4 A1I0L 27 A1I0L HO4 H12 H 0 1 N Y N N N N -20.491 -9.870 1.525 -3.370 2.230 -0.121 HO4 A1I0L 28 A1I0L H5 H13 H 0 1 N N N N N N -22.278 -12.136 1.705 -2.127 -0.053 1.297 H5 A1I0L 29 A1I0L HO3 H14 H 0 1 N Y N N N N -21.807 -9.532 -1.540 -0.223 3.599 0.060 HO3 A1I0L 30 A1I0L H61 H15 H 0 1 N N N N N N -22.402 -11.513 4.124 -4.104 0.465 -0.164 H61 A1I0L 31 A1I0L H62 H16 H 0 1 N N N N N N -20.939 -10.877 3.299 -3.317 -0.426 -1.488 H62 A1I0L 32 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1I0L C8 C7 SING N N 1 A1I0L C7 N2 SING N N 2 A1I0L C7 O7 DOUB N N 3 A1I0L O3 C3 SING N N 4 A1I0L N2 C2 SING N N 5 A1I0L C3 C2 SING N N 6 A1I0L C3 C4 SING N N 7 A1I0L C2 C1 SING N N 8 A1I0L O4 C4 SING N N 9 A1I0L C4 C5 SING N N 10 A1I0L C1 O1 SING N N 11 A1I0L C1 O5 SING N N 12 A1I0L O1 CM SING N N 13 A1I0L C5 O5 SING N N 14 A1I0L C5 C6 SING N N 15 A1I0L C6 F6 SING N N 16 A1I0L N2 HN2 SING N N 17 A1I0L C3 H3 SING N N 18 A1I0L C2 H2 SING N N 19 A1I0L C1 H1 SING N N 20 A1I0L CM HM1 SING N N 21 A1I0L CM HM2 SING N N 22 A1I0L CM HM3 SING N N 23 A1I0L C8 H81 SING N N 24 A1I0L C8 H82 SING N N 25 A1I0L C8 H83 SING N N 26 A1I0L C4 H4 SING N N 27 A1I0L O4 HO4 SING N N 28 A1I0L C5 H5 SING N N 29 A1I0L O3 HO3 SING N N 30 A1I0L C6 H61 SING N N 31 A1I0L C6 H62 SING N N 32 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1I0L InChI InChI 1.06 "InChI=1S/C9H16FNO5/c1-4(12)11-6-8(14)7(13)5(3-10)16-9(6)15-2/h5-9,13-14H,3H2,1-2H3,(H,11,12)/t5-,6-,7-,8-,9-/m1/s1" A1I0L InChIKey InChI 1.06 VGKZAKQBHODFLA-JGKVKWKGSA-N A1I0L SMILES_CANONICAL CACTVS 3.385 "CO[C@@H]1O[C@H](CF)[C@@H](O)[C@H](O)[C@H]1NC(C)=O" A1I0L SMILES CACTVS 3.385 "CO[CH]1O[CH](CF)[CH](O)[CH](O)[CH]1NC(C)=O" A1I0L SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@H]1OC)CF)O)O" A1I0L SMILES "OpenEye OEToolkits" 2.0.7 "CC(=O)NC1C(C(C(OC1OC)CF)O)O" # _pdbx_chem_comp_identifier.comp_id A1I0L _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[(2~{R},3~{R},4~{R},5~{S},6~{S})-6-(fluoranylmethyl)-2-methoxy-4,5-bis(oxidanyl)oxan-3-yl]ethanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1I0L "Create component" 2025-01-30 PDBE A1I0L "Initial release" 2026-02-18 RCSB # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 A1I0L "methyl 2-acetamido-2-deoxy-6-fluoro-6-deoxy-beta-D-glucoside" PDB ? 2 A1I0L "methyl 2-acetamido-2-deoxy-6-fluoro-6-deoxy-D-glucoside" PDB ? 3 A1I0L "methyl 2-acetamido-2-deoxy-6-fluoro-6-deoxy-glucoside" PDB ? 4 A1I0L "N-[(2R,3R,4R,5S,6S)-6-(fluoranylmethyl)-2-methoxy-4,5-bis(oxidanyl)oxan-3-yl]ethanamide" PDB ? # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support A1I0L "CARBOHYDRATE ISOMER" D PDB ? A1I0L "CARBOHYDRATE RING" pyranose PDB ? A1I0L "CARBOHYDRATE ANOMER" beta PDB ? A1I0L "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? #