data_A1I19 # _chem_comp.id A1I19 _chem_comp.name "methyl (3~{R})-1-methyl-5-oxidanylidene-pyrrolidine-3-carboxylate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C7 H11 N O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-02-17 _chem_comp.pdbx_modified_date 2026-01-16 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 157.167 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1I19 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9IDR _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1I19 C01 C1 C 0 1 N N N N N N -21.104 -54.217 -20.660 3.930 0.380 0.278 C01 A1I19 1 A1I19 O02 O1 O 0 1 N N N N N N -22.419 -54.484 -20.270 2.622 0.658 -0.287 O02 A1I19 2 A1I19 C03 C2 C 0 1 N N N N N N -23.014 -55.540 -20.959 1.673 -0.276 -0.116 C03 A1I19 3 A1I19 O04 O2 O 0 1 N N N N N N -22.684 -55.796 -22.066 1.927 -1.292 0.485 O04 A1I19 4 A1I19 C05 C3 C 0 1 N N R N N N -24.090 -56.365 -20.266 0.291 -0.056 -0.675 C05 A1I19 5 A1I19 C06 C4 C 0 1 N N N N N N -24.688 -57.413 -21.232 -0.670 -1.181 -0.230 C06 A1I19 6 A1I19 N07 N1 N 0 1 N N N N N N -24.950 -58.580 -20.436 -1.965 -0.526 -0.012 N07 A1I19 7 A1I19 C08 C5 C 0 1 N N N N N N -25.798 -59.692 -20.813 -3.246 -1.233 0.072 C08 A1I19 8 A1I19 C09 C6 C 0 1 N N N N N N -24.190 -58.452 -19.144 -1.826 0.806 0.102 C09 A1I19 9 A1I19 O10 O3 O 0 1 N N N N N N -24.184 -59.243 -18.270 -2.735 1.586 0.294 O10 A1I19 10 A1I19 C11 C7 C 0 1 N N N N N N -23.464 -57.184 -19.159 -0.370 1.191 -0.044 C11 A1I19 11 A1I19 H1 H1 H 0 1 N N N N N N -20.710 -53.375 -20.072 4.601 1.213 0.069 H1 A1I19 12 A1I19 H2 H2 H 0 1 N N N N N N -20.482 -55.108 -20.487 3.839 0.248 1.356 H2 A1I19 13 A1I19 H3 H3 H 0 1 N N N N N N -21.084 -53.958 -21.729 4.332 -0.530 -0.167 H3 A1I19 14 A1I19 H4 H4 H 0 1 N N N N N N -24.883 -55.714 -19.870 0.320 0.025 -1.762 H4 A1I19 15 A1I19 H5 H5 H 0 1 N N N N N N -23.971 -57.649 -22.032 -0.756 -1.935 -1.013 H5 A1I19 16 A1I19 H6 H6 H 0 1 N N N N N N -25.621 -57.035 -21.676 -0.317 -1.635 0.695 H6 A1I19 17 A1I19 H7 H7 H 0 1 N N N N N N -25.807 -60.438 -20.004 -3.442 -1.508 1.108 H7 A1I19 18 A1I19 H8 H8 H 0 1 N N N N N N -26.822 -59.329 -20.989 -4.043 -0.584 -0.290 H8 A1I19 19 A1I19 H9 H9 H 0 1 N N N N N N -25.410 -60.154 -21.733 -3.204 -2.134 -0.541 H9 A1I19 20 A1I19 H10 H10 H 0 1 N N N N N N -22.397 -57.356 -19.366 0.068 1.402 0.932 H10 A1I19 21 A1I19 H11 H11 H 0 1 N N N N N N -23.572 -56.669 -18.193 -0.267 2.052 -0.704 H11 A1I19 22 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1I19 O04 C03 DOUB N N 1 A1I19 C06 N07 SING N N 2 A1I19 C06 C05 SING N N 3 A1I19 C03 O02 SING N N 4 A1I19 C03 C05 SING N N 5 A1I19 C08 N07 SING N N 6 A1I19 C01 O02 SING N N 7 A1I19 N07 C09 SING N N 8 A1I19 C05 C11 SING N N 9 A1I19 C11 C09 SING N N 10 A1I19 C09 O10 DOUB N N 11 A1I19 C01 H1 SING N N 12 A1I19 C01 H2 SING N N 13 A1I19 C01 H3 SING N N 14 A1I19 C05 H4 SING N N 15 A1I19 C06 H5 SING N N 16 A1I19 C06 H6 SING N N 17 A1I19 C08 H7 SING N N 18 A1I19 C08 H8 SING N N 19 A1I19 C08 H9 SING N N 20 A1I19 C11 H10 SING N N 21 A1I19 C11 H11 SING N N 22 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1I19 InChI InChI 1.06 "InChI=1S/C7H11NO3/c1-8-4-5(3-6(8)9)7(10)11-2/h5H,3-4H2,1-2H3/t5-/m1/s1" A1I19 InChIKey InChI 1.06 JFZRRXGXEHUJCI-RXMQYKEDSA-N A1I19 SMILES_CANONICAL CACTVS 3.385 "COC(=O)[C@H]1CN(C)C(=O)C1" A1I19 SMILES CACTVS 3.385 "COC(=O)[CH]1CN(C)C(=O)C1" A1I19 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN1C[C@@H](CC1=O)C(=O)OC" A1I19 SMILES "OpenEye OEToolkits" 2.0.7 "CN1CC(CC1=O)C(=O)OC" # _pdbx_chem_comp_identifier.comp_id A1I19 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "methyl (3~{R})-1-methyl-5-oxidanylidene-pyrrolidine-3-carboxylate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1I19 "Create component" 2025-02-17 PDBE A1I19 "Initial release" 2026-01-21 RCSB #