data_A1I45 # _chem_comp.id A1I45 _chem_comp.name "5-oxidanyl-2-(phenylmethyl)-1,9-dihydropyrimido[4,5-b]indol-4-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H13 N3 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-03 _chem_comp.pdbx_modified_date 2025-05-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 291.304 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1I45 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9QAD _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1I45 C1 C1 C 0 1 Y N N N N N 2.814 30.323 9.496 4.833 1.282 -0.025 C1 A1I45 1 A1I45 C2 C2 C 0 1 Y N N N N N 2.962 29.552 10.639 5.456 0.044 -0.016 C2 A1I45 2 A1I45 C3 C3 C 0 1 Y N N N N N 3.764 28.419 10.633 4.712 -1.117 -0.002 C3 A1I45 3 A1I45 C7 C4 C 0 1 N N N N N N 7.700 25.514 5.195 -2.614 -1.780 -0.000 C7 A1I45 4 A1I45 C8 C5 C 0 1 Y N N N N N 8.092 24.227 5.880 -3.650 -0.685 -0.003 C8 A1I45 5 A1I45 C9 C6 C 0 1 Y N N N N N 9.299 24.126 6.562 -4.122 -0.184 -1.201 C9 A1I45 6 A1I45 C10 C7 C 0 1 Y N N N N N 9.661 22.945 7.193 -5.072 0.821 -1.203 C10 A1I45 7 A1I45 C11 C8 C 0 1 Y N N N N N 8.819 21.847 7.149 -5.549 1.324 -0.007 C11 A1I45 8 A1I45 C12 C9 C 0 1 Y N N N N N 7.614 21.934 6.473 -5.076 0.822 1.191 C12 A1I45 9 A1I45 C13 C10 C 0 1 Y N N N N N 7.254 23.117 5.842 -4.131 -0.186 1.193 C13 A1I45 10 A1I45 C14 C11 C 0 1 N N N N N N 5.416 28.382 5.949 0.082 0.728 0.004 C14 A1I45 11 A1I45 C15 C12 C 0 1 Y N N N N N 5.122 28.123 7.317 1.245 -0.079 0.008 C15 A1I45 12 A1I45 C16 C13 C 0 1 Y N N N N N 4.300 28.814 8.282 2.688 0.197 -0.005 C16 A1I45 13 A1I45 O1 O1 O 0 1 N N N N N N 4.972 29.327 5.304 0.171 1.946 0.003 O1 A1I45 14 A1I45 C5 C14 C 0 1 Y N N N N N 5.703 26.997 7.934 1.103 -1.463 0.009 C5 A1I45 15 A1I45 N N1 N 0 1 Y N N N N N 5.278 26.958 9.233 2.341 -2.031 0.012 N A1I45 16 A1I45 C4 C15 C 0 1 Y N N N N N 4.428 28.049 9.462 3.322 -1.056 0.004 C4 A1I45 17 A1I45 C C16 C 0 1 Y N N N N N 3.474 29.967 8.319 3.452 1.366 -0.014 C A1I45 18 A1I45 O O2 O 0 1 N N N N N N 3.306 30.750 7.220 2.842 2.580 -0.022 O A1I45 19 A1I45 N2 N2 N 0 1 N N N N N N 6.267 27.475 5.344 -1.126 0.131 0.002 N2 A1I45 20 A1I45 C6 C17 C 0 1 N N N N N N 6.801 26.392 6.003 -1.237 -1.169 0.002 C6 A1I45 21 A1I45 N1 N3 N 0 1 N N N N N N 6.540 26.101 7.342 -0.165 -1.984 0.006 N1 A1I45 22 A1I45 H1 H1 H 0 1 N N N N N N 2.186 31.202 9.517 5.427 2.184 -0.037 H1 A1I45 23 A1I45 H2 H2 H 0 1 N N N N N N 2.447 29.836 11.545 6.535 -0.012 -0.020 H2 A1I45 24 A1I45 H3 H3 H 0 1 N N N N N N 3.874 27.827 11.530 5.209 -2.075 0.005 H3 A1I45 25 A1I45 H4 H4 H 0 1 N N N N N N 8.618 26.077 4.968 -2.740 -2.397 0.890 H4 A1I45 26 A1I45 H5 H5 H 0 1 N N N N N N 7.183 25.262 4.257 -2.736 -2.398 -0.890 H5 A1I45 27 A1I45 H6 H6 H 0 1 N N N N N N 9.963 24.977 6.601 -3.749 -0.576 -2.135 H6 A1I45 28 A1I45 H7 H7 H 0 1 N N N N N N 10.602 22.882 7.720 -5.441 1.213 -2.139 H7 A1I45 29 A1I45 H8 H8 H 0 1 N N N N N N 9.101 20.927 7.640 -6.291 2.109 -0.009 H8 A1I45 30 A1I45 H9 H9 H 0 1 N N N N N N 6.953 21.081 6.436 -5.449 1.215 2.126 H9 A1I45 31 A1I45 H10 H10 H 0 1 N N N N N N 6.313 23.176 5.316 -3.765 -0.581 2.129 H10 A1I45 32 A1I45 H11 H11 H 0 1 N N N N N N 5.532 26.265 9.908 2.511 -2.986 0.013 H11 A1I45 33 A1I45 H12 H12 H 0 1 N N N N N N 3.808 30.393 6.497 2.667 2.938 0.859 H12 A1I45 34 A1I45 H13 H13 H 0 1 N N N N N N 6.929 25.313 7.819 -0.291 -2.946 0.006 H13 A1I45 35 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1I45 C7 C8 SING N N 1 A1I45 C7 C6 SING N N 2 A1I45 O1 C14 DOUB N N 3 A1I45 N2 C14 SING N N 4 A1I45 N2 C6 DOUB N N 5 A1I45 C13 C8 DOUB Y N 6 A1I45 C13 C12 SING Y N 7 A1I45 C8 C9 SING Y N 8 A1I45 C14 C15 SING N N 9 A1I45 C6 N1 SING N N 10 A1I45 C12 C11 DOUB Y N 11 A1I45 C9 C10 DOUB Y N 12 A1I45 C11 C10 SING Y N 13 A1I45 O C SING N N 14 A1I45 C15 C5 DOUB Y N 15 A1I45 C15 C16 SING Y N 16 A1I45 N1 C5 SING N N 17 A1I45 C5 N SING Y N 18 A1I45 C16 C DOUB Y N 19 A1I45 C16 C4 SING Y N 20 A1I45 C C1 SING Y N 21 A1I45 N C4 SING Y N 22 A1I45 C4 C3 DOUB Y N 23 A1I45 C1 C2 DOUB Y N 24 A1I45 C3 C2 SING Y N 25 A1I45 C1 H1 SING N N 26 A1I45 C2 H2 SING N N 27 A1I45 C3 H3 SING N N 28 A1I45 C7 H4 SING N N 29 A1I45 C7 H5 SING N N 30 A1I45 C9 H6 SING N N 31 A1I45 C10 H7 SING N N 32 A1I45 C11 H8 SING N N 33 A1I45 C12 H9 SING N N 34 A1I45 C13 H10 SING N N 35 A1I45 N H11 SING N N 36 A1I45 O H12 SING N N 37 A1I45 N1 H13 SING N N 38 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1I45 InChI InChI 1.06 "InChI=1S/C17H13N3O2/c21-12-8-4-7-11-14(12)15-16(18-11)19-13(20-17(15)22)9-10-5-2-1-3-6-10/h1-8,21H,9H2,(H2,18,19,20,22)" A1I45 InChIKey InChI 1.06 HYNXJMDEJSMHIV-UHFFFAOYSA-N A1I45 SMILES_CANONICAL CACTVS 3.385 "Oc1cccc2[nH]c3NC(=NC(=O)c3c12)Cc4ccccc4" A1I45 SMILES CACTVS 3.385 "Oc1cccc2[nH]c3NC(=NC(=O)c3c12)Cc4ccccc4" A1I45 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)CC2=NC(=O)c3c4c(cccc4O)[nH]c3N2" A1I45 SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)CC2=NC(=O)c3c4c(cccc4O)[nH]c3N2" # _pdbx_chem_comp_identifier.comp_id A1I45 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "5-oxidanyl-2-(phenylmethyl)-1,9-dihydropyrimido[4,5-b]indol-4-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1I45 "Create component" 2025-03-03 PDBE A1I45 "Initial release" 2025-05-14 RCSB #