data_A1I4R # _chem_comp.id A1I4R _chem_comp.name "(3R)-3-phenylsulfanylpiperidine-2,6-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H11 N O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-02-26 _chem_comp.pdbx_modified_date 2025-10-24 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 221.276 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1I4R _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9HTK _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1I4R O2 O1 O 0 1 N N N N N N 22.874 11.082 25.429 -4.479 -1.057 0.129 O2 A1I4R 1 A1I4R C11 C1 C 0 1 N N N N N N 23.207 12.113 25.968 -3.395 -0.540 -0.036 C11 A1I4R 2 A1I4R N1 N1 N 0 1 N N N N N N 22.404 13.208 25.815 -2.309 -1.097 0.521 N1 A1I4R 3 A1I4R C10 C2 C 0 1 N N N N N N 24.412 12.207 26.843 -3.292 0.711 -0.868 C10 A1I4R 4 A1I4R C9 C3 C 0 1 N N N N N N 24.688 13.577 27.426 -2.107 1.547 -0.374 C9 A1I4R 5 A1I4R C2 C4 C 0 1 N N R N N N 23.460 14.421 27.593 -0.846 0.677 -0.414 C2 A1I4R 6 A1I4R C1 C5 C 0 1 N N N N N N 22.595 14.452 26.360 -1.081 -0.575 0.389 C1 A1I4R 7 A1I4R O1 O2 O 0 1 N N N N N N 22.013 15.425 25.926 -0.142 -1.122 0.926 O1 A1I4R 8 A1I4R S1 S1 S 0 1 N N N N N N 24.010 16.027 28.188 0.549 1.599 0.290 S1 A1I4R 9 A1I4R C3 C6 C 0 1 Y N N N N N 22.690 16.627 29.184 1.914 0.516 0.026 C3 A1I4R 10 A1I4R C8 C7 C 0 1 Y N N N N N 21.538 15.901 29.435 3.187 0.886 0.442 C8 A1I4R 11 A1I4R C7 C8 C 0 1 Y N N N N N 20.538 16.457 30.213 4.254 0.034 0.233 C7 A1I4R 12 A1I4R C6 C9 C 0 1 Y N N N N N 20.661 17.755 30.668 4.057 -1.185 -0.389 C6 A1I4R 13 A1I4R C5 C10 C 0 1 Y N N N N N 21.789 18.495 30.375 2.791 -1.556 -0.805 C5 A1I4R 14 A1I4R C4 C11 C 0 1 Y N N N N N 22.809 17.930 29.632 1.718 -0.712 -0.594 C4 A1I4R 15 A1I4R H1 H1 H 0 1 N N N N N N 21.591 13.090 25.245 -2.417 -1.910 1.040 H1 A1I4R 16 A1I4R H2 H2 H 0 1 N N N N N N 24.280 11.503 27.678 -3.138 0.442 -1.913 H2 A1I4R 17 A1I4R H3 H3 H 0 1 N N N N N N 25.288 11.909 26.247 -4.211 1.289 -0.771 H3 A1I4R 18 A1I4R H4 H4 H 0 1 N N N N N N 25.156 13.446 28.413 -1.974 2.413 -1.022 H4 A1I4R 19 A1I4R H5 H5 H 0 1 N N N N N N 25.384 14.105 26.757 -2.292 1.877 0.648 H5 A1I4R 20 A1I4R H6 H6 H 0 1 N N N N N N 22.865 14.000 28.417 -0.621 0.408 -1.446 H6 A1I4R 21 A1I4R H7 H7 H 0 1 N N N N N N 21.421 14.908 29.027 3.342 1.838 0.928 H7 A1I4R 22 A1I4R H8 H8 H 0 1 N N N N N N 19.662 15.877 30.464 5.244 0.321 0.556 H8 A1I4R 23 A1I4R H9 H9 H 0 1 N N N N N N 19.869 18.194 31.257 4.893 -1.848 -0.552 H9 A1I4R 24 A1I4R H10 H10 H 0 1 N N N N N N 21.875 19.513 30.725 2.641 -2.508 -1.291 H10 A1I4R 25 A1I4R H11 H11 H 0 1 N N N N N N 23.695 18.504 29.402 0.729 -1.005 -0.914 H11 A1I4R 26 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1I4R O2 C11 DOUB N N 1 A1I4R N1 C11 SING N N 2 A1I4R N1 C1 SING N N 3 A1I4R O1 C1 DOUB N N 4 A1I4R C11 C10 SING N N 5 A1I4R C1 C2 SING N N 6 A1I4R C10 C9 SING N N 7 A1I4R C9 C2 SING N N 8 A1I4R C2 S1 SING N N 9 A1I4R S1 C3 SING N N 10 A1I4R C3 C8 DOUB Y N 11 A1I4R C3 C4 SING Y N 12 A1I4R C8 C7 SING Y N 13 A1I4R C4 C5 DOUB Y N 14 A1I4R C7 C6 DOUB Y N 15 A1I4R C5 C6 SING Y N 16 A1I4R N1 H1 SING N N 17 A1I4R C10 H2 SING N N 18 A1I4R C10 H3 SING N N 19 A1I4R C9 H4 SING N N 20 A1I4R C9 H5 SING N N 21 A1I4R C2 H6 SING N N 22 A1I4R C8 H7 SING N N 23 A1I4R C7 H8 SING N N 24 A1I4R C6 H9 SING N N 25 A1I4R C5 H10 SING N N 26 A1I4R C4 H11 SING N N 27 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1I4R InChI InChI 1.06 "InChI=1S/C11H11NO2S/c13-10-7-6-9(11(14)12-10)15-8-4-2-1-3-5-8/h1-5,9H,6-7H2,(H,12,13,14)/t9-/m1/s1" A1I4R InChIKey InChI 1.06 DVTWEZHTLIJLKO-SECBINFHSA-N A1I4R SMILES_CANONICAL CACTVS 3.385 "O=C1CC[C@@H](Sc2ccccc2)C(=O)N1" A1I4R SMILES CACTVS 3.385 "O=C1CC[CH](Sc2ccccc2)C(=O)N1" A1I4R SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)S[C@@H]2CCC(=O)NC2=O" A1I4R SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)SC2CCC(=O)NC2=O" # _pdbx_chem_comp_identifier.comp_id A1I4R _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3~{R})-3-phenylsulfanylpiperidine-2,6-dione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1I4R "Create component" 2025-02-26 PDBE A1I4R "Initial release" 2025-10-29 RCSB #