data_A1I4X # _chem_comp.id A1I4X _chem_comp.name "(2~{S},4~{S})-1-[(3~{S})-3-azanyl-3-(2-methoxyphenyl)propanoyl]-4-cyclohexyl-~{N}-[(2~{S})-1-(methylamino)-1-oxidanylidene-3-pyridin-4-yl-propan-2-yl]pyrrolidine-2-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C30 H41 N5 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-02-27 _chem_comp.pdbx_modified_date 2025-10-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 535.678 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1I4X _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9Q9P _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1I4X N1 N1 N 0 1 N N N N N N -8.079 -0.871 -6.911 -4.993 0.193 2.841 N1 A1I4X 1 A1I4X N3 N2 N 0 1 N N N N N N -6.811 1.331 -7.940 -2.965 0.262 -0.241 N3 A1I4X 2 A1I4X C4 C1 C 0 1 N N N N N N -4.875 -0.120 -7.459 -4.854 1.730 0.268 C4 A1I4X 3 A1I4X C5 C2 C 0 1 Y N N N N N -3.854 0.901 -7.888 -4.289 2.865 -0.545 C5 A1I4X 4 A1I4X C6 C3 C 0 1 Y N N N N N -3.031 1.536 -6.961 -4.032 2.710 -1.899 C6 A1I4X 5 A1I4X C7 C4 C 0 1 Y N N N N N -2.089 2.445 -7.406 -3.514 3.773 -2.613 C7 A1I4X 6 A1I4X C8 C5 C 0 1 Y N N N N N -2.721 2.174 -9.575 -3.496 5.109 -0.737 C8 A1I4X 7 A1I4X C10 C6 C 0 1 N N N N N N -7.204 2.150 -8.915 -1.675 -0.085 -0.065 C10 A1I4X 8 A1I4X C13 C7 C 0 1 N N S N N N -5.703 4.539 -7.354 -0.095 -2.905 -0.471 C13 A1I4X 9 A1I4X C15 C8 C 0 1 N N N N N N -3.861 5.968 -8.272 -1.082 -5.198 -0.564 C15 A1I4X 10 A1I4X C17 C9 C 0 1 N N N N N N -2.886 7.692 -6.702 0.394 -7.203 -0.356 C17 A1I4X 11 A1I4X C20 C10 C 0 1 N N N N N N -6.791 4.319 -6.300 1.098 -1.999 -0.866 C20 A1I4X 12 A1I4X C21 C11 C 0 1 N N N N N N -9.035 3.343 -6.442 1.227 0.507 -0.789 C21 A1I4X 13 A1I4X C22 C12 C 0 1 N N N N N N -10.119 2.611 -7.195 2.712 0.463 -0.533 C22 A1I4X 14 A1I4X C24 C13 C 0 1 Y N N N N N -12.669 2.191 -7.144 4.709 1.844 -0.032 C24 A1I4X 15 A1I4X C26 C14 C 0 1 Y N N N N N -13.693 1.248 -9.116 7.017 1.983 -0.653 C26 A1I4X 16 A1I4X C28 C15 C 0 1 Y N N N N N -15.080 1.943 -7.279 6.422 1.598 1.634 C28 A1I4X 17 A1I4X C1 C16 C 0 1 N N N N N N -7.831 -0.216 -5.635 -5.543 -0.838 3.725 C1 A1I4X 18 A1I4X C2 C17 C 0 1 N N N N N N -7.118 -1.123 -7.796 -4.268 -0.161 1.761 C2 A1I4X 19 A1I4X O1 O1 O 0 1 N N N N N N -6.965 -2.218 -8.333 -4.067 -1.334 1.524 O1 A1I4X 20 A1I4X C3 C18 C 0 1 N N S N N N -6.210 0.030 -8.192 -3.708 0.899 0.849 C3 A1I4X 21 A1I4X N2 N3 N 0 1 Y N N N N N -1.924 2.774 -8.690 -3.264 4.925 -2.022 N2 A1I4X 22 A1I4X C9 C19 C 0 1 Y N N N N N -3.680 1.244 -9.227 -4.018 4.093 0.040 C9 A1I4X 23 A1I4X O2 O2 O 0 1 N N N N N N -7.193 1.833 -10.105 -1.129 0.129 0.996 O2 A1I4X 24 A1I4X C11 C20 C 0 1 N N S N N N -7.614 3.557 -8.483 -0.911 -0.740 -1.187 C11 A1I4X 25 A1I4X C12 C21 C 0 1 N N N N N N -6.469 4.561 -8.687 -1.260 -2.242 -1.253 C12 A1I4X 26 A1I4X C14 C22 C 0 1 N N N N N N -4.823 5.751 -7.111 0.131 -4.344 -0.939 C14 A1I4X 27 A1I4X C16 C23 C 0 1 N N N N N N -2.646 6.821 -7.920 -0.857 -6.637 -1.032 C16 A1I4X 28 A1I4X C18 C24 C 0 1 N N N N N N -3.232 6.886 -5.465 1.607 -6.349 -0.731 C18 A1I4X 29 A1I4X C19 C25 C 0 1 N N N N N N -4.078 5.657 -5.780 1.381 -4.910 -0.263 C19 A1I4X 30 A1I4X N4 N4 N 0 1 N N N N N N -7.883 3.682 -7.048 0.534 -0.639 -0.934 N4 A1I4X 31 A1I4X O3 O3 O 0 1 N N N N N N -9.190 3.654 -5.256 0.657 1.575 -0.865 O3 A1I4X 32 A1I4X C23 C26 C 0 1 N N S N N N -11.425 2.605 -6.375 3.251 1.890 -0.409 C23 A1I4X 33 A1I4X N5 N5 N 0 1 N N N N N N -11.213 1.790 -5.169 3.099 2.584 -1.695 N5 A1I4X 34 A1I4X C25 C27 C 0 1 Y N N N N N -12.563 1.630 -8.416 5.679 2.019 -1.000 C25 A1I4X 35 A1I4X C27 C28 C 0 1 Y N N N N N -14.942 1.410 -8.546 7.388 1.773 0.662 C27 A1I4X 36 A1I4X C29 C29 C 0 1 Y N N N N N -13.948 2.338 -6.581 5.078 1.633 1.289 C29 A1I4X 37 A1I4X O4 O4 O 0 1 N N N N N N -13.976 2.875 -5.318 4.126 1.462 2.243 O4 A1I4X 38 A1I4X C30 C30 C 0 1 N N N N N N -15.121 3.616 -4.903 4.579 1.249 3.581 C30 A1I4X 39 A1I4X H4 H1 H 0 1 N N N N N N -9.015 -1.144 -7.133 -5.154 1.131 3.031 H4 A1I4X 40 A1I4X H12 H2 H 0 1 N N N N N N -6.935 1.624 -6.992 -3.402 0.090 -1.090 H12 A1I4X 41 A1I4X H6 H3 H 0 1 N N N N N N -5.053 -0.007 -6.379 -5.459 2.132 1.081 H6 A1I4X 42 A1I4X H7 H4 H 0 1 N N N N N N -4.474 -1.124 -7.661 -5.473 1.099 -0.369 H7 A1I4X 43 A1I4X H8 H5 H 0 1 N N N N N N -3.128 1.321 -5.907 -4.234 1.768 -2.389 H8 A1I4X 44 A1I4X H9 H6 H 0 1 N N N N N N -1.450 2.916 -6.674 -3.311 3.660 -3.668 H9 A1I4X 45 A1I4X H10 H7 H 0 1 N N N N N N -2.610 2.429 -10.619 -3.282 6.068 -0.288 H10 A1I4X 46 A1I4X H16 H8 H 0 1 N N N N N N -5.057 3.649 -7.357 -0.274 -2.869 0.603 H16 A1I4X 47 A1I4X H19 H9 H 0 1 N N N N N N -3.506 4.985 -8.615 -1.216 -5.184 0.518 H19 A1I4X 48 A1I4X H18 H10 H 0 1 N N N N N N -4.408 6.465 -9.086 -1.973 -4.795 -1.046 H18 A1I4X 49 A1I4X H22 H11 H 0 1 N N N N N N -1.974 8.273 -6.500 0.260 -7.189 0.726 H22 A1I4X 50 A1I4X H23 H12 H 0 1 N N N N N N -3.718 8.379 -6.919 0.555 -8.228 -0.689 H23 A1I4X 51 A1I4X H28 H13 H 0 1 N N N N N N -6.430 3.660 -5.497 1.879 -2.048 -0.107 H28 A1I4X 52 A1I4X H29 H14 H 0 1 N N N N N N -7.118 5.277 -5.869 1.494 -2.295 -1.837 H29 A1I4X 53 A1I4X H30 H15 H 0 1 N N N N N N -10.296 3.114 -8.157 2.905 -0.080 0.392 H30 A1I4X 54 A1I4X H31 H16 H 0 1 N N N N N N -9.799 1.574 -7.376 3.208 -0.043 -1.361 H31 A1I4X 55 A1I4X H36 H17 H 0 1 N N N N N N -13.600 0.824 -10.105 7.774 2.120 -1.411 H36 A1I4X 56 A1I4X H38 H18 H 0 1 N N N N N N -16.059 2.051 -6.836 6.712 1.434 2.661 H38 A1I4X 57 A1I4X H1 H19 H 0 1 N N N N N N -8.777 -0.120 -5.082 -6.095 -0.364 4.536 H1 A1I4X 58 A1I4X H2 H20 H 0 1 N N N N N N -7.121 -0.816 -5.047 -6.214 -1.483 3.157 H2 A1I4X 59 A1I4X H3 H21 H 0 1 N N N N N N -7.407 0.783 -5.812 -4.730 -1.434 4.138 H3 A1I4X 60 A1I4X H5 H22 H 0 1 N N N N N N -6.009 -0.058 -9.270 -3.039 1.548 1.414 H5 A1I4X 61 A1I4X H11 H23 H 0 1 N N N N N N -4.292 0.785 -9.989 -4.210 4.251 1.091 H11 A1I4X 62 A1I4X H13 H24 H 0 1 N N N N N N -8.490 3.879 -9.066 -1.158 -0.260 -2.134 H13 A1I4X 63 A1I4X H15 H25 H 0 1 N N N N N N -5.818 4.246 -9.516 -1.278 -2.589 -2.286 H15 A1I4X 64 A1I4X H14 H26 H 0 1 N N N N N N -6.864 5.567 -8.893 -2.214 -2.438 -0.763 H14 A1I4X 65 A1I4X H17 H27 H 0 1 N N N N N N -5.480 6.632 -7.058 0.264 -4.358 -2.021 H17 A1I4X 66 A1I4X H20 H28 H 0 1 N N N N N N -1.794 6.156 -7.716 -1.721 -7.246 -0.765 H20 A1I4X 67 A1I4X H21 H29 H 0 1 N N N N N N -2.409 7.469 -8.777 -0.723 -6.651 -2.113 H21 A1I4X 68 A1I4X H24 H30 H 0 1 N N N N N N -2.298 6.557 -4.987 2.498 -6.752 -0.249 H24 A1I4X 69 A1I4X H25 H31 H 0 1 N N N N N N -3.792 7.530 -4.771 1.741 -6.363 -1.812 H25 A1I4X 70 A1I4X H27 H32 H 0 1 N N N N N N -3.416 4.779 -5.813 2.245 -4.301 -0.530 H27 A1I4X 71 A1I4X H26 H33 H 0 1 N N N N N N -4.818 5.529 -4.976 1.247 -4.896 0.819 H26 A1I4X 72 A1I4X H32 H34 H 0 1 N N N N N N -11.589 3.641 -6.044 2.693 2.423 0.360 H32 A1I4X 73 A1I4X H34 H35 H 0 1 N N N N N N -12.052 1.775 -4.624 3.607 2.108 -2.425 H34 A1I4X 74 A1I4X H33 H36 H 0 1 N N N N N N -10.972 0.857 -5.436 2.125 2.684 -1.939 H33 A1I4X 75 A1I4X H35 H38 H 0 1 N N N N N N -11.588 1.492 -8.859 5.392 2.183 -2.028 H35 A1I4X 76 A1I4X H37 H39 H 0 1 N N N N N N -15.822 1.116 -9.099 8.434 1.745 0.930 H37 A1I4X 77 A1I4X H41 H40 H 0 1 N N N N N N -14.975 3.970 -3.872 5.195 0.350 3.618 H41 A1I4X 78 A1I4X H39 H41 H 0 1 N N N N N N -15.261 4.479 -5.571 5.168 2.106 3.906 H39 A1I4X 79 A1I4X H40 H42 H 0 1 N N N N N N -16.011 2.971 -4.946 3.720 1.127 4.241 H40 A1I4X 80 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1I4X C1 N1 SING N N 1 A1I4X N1 C2 SING N N 2 A1I4X C2 O1 DOUB N N 3 A1I4X C2 C3 SING N N 4 A1I4X C3 C4 SING N N 5 A1I4X C4 C5 SING N N 6 A1I4X C5 C6 DOUB Y N 7 A1I4X C6 C7 SING Y N 8 A1I4X C7 N2 DOUB Y N 9 A1I4X N2 C8 SING Y N 10 A1I4X C8 C9 DOUB Y N 11 A1I4X C3 N3 SING N N 12 A1I4X N3 C10 SING N N 13 A1I4X C10 O2 DOUB N N 14 A1I4X C10 C11 SING N N 15 A1I4X C11 C12 SING N N 16 A1I4X C12 C13 SING N N 17 A1I4X C13 C14 SING N N 18 A1I4X C14 C15 SING N N 19 A1I4X C15 C16 SING N N 20 A1I4X C16 C17 SING N N 21 A1I4X C17 C18 SING N N 22 A1I4X C18 C19 SING N N 23 A1I4X C13 C20 SING N N 24 A1I4X C20 N4 SING N N 25 A1I4X N4 C21 SING N N 26 A1I4X C21 O3 DOUB N N 27 A1I4X C21 C22 SING N N 28 A1I4X C22 C23 SING N N 29 A1I4X C23 N5 SING N N 30 A1I4X C23 C24 SING N N 31 A1I4X C24 C25 DOUB Y N 32 A1I4X C25 C26 SING Y N 33 A1I4X C26 C27 DOUB Y N 34 A1I4X C27 C28 SING Y N 35 A1I4X C28 C29 DOUB Y N 36 A1I4X C29 O4 SING N N 37 A1I4X O4 C30 SING N N 38 A1I4X C5 C9 SING Y N 39 A1I4X C11 N4 SING N N 40 A1I4X C24 C29 SING Y N 41 A1I4X C14 C19 SING N N 42 A1I4X N1 H4 SING N N 43 A1I4X N3 H12 SING N N 44 A1I4X C4 H6 SING N N 45 A1I4X C4 H7 SING N N 46 A1I4X C6 H8 SING N N 47 A1I4X C7 H9 SING N N 48 A1I4X C8 H10 SING N N 49 A1I4X C13 H16 SING N N 50 A1I4X C15 H19 SING N N 51 A1I4X C15 H18 SING N N 52 A1I4X C17 H22 SING N N 53 A1I4X C17 H23 SING N N 54 A1I4X C20 H28 SING N N 55 A1I4X C20 H29 SING N N 56 A1I4X C22 H30 SING N N 57 A1I4X C22 H31 SING N N 58 A1I4X C26 H36 SING N N 59 A1I4X C28 H38 SING N N 60 A1I4X C1 H1 SING N N 61 A1I4X C1 H2 SING N N 62 A1I4X C1 H3 SING N N 63 A1I4X C3 H5 SING N N 64 A1I4X C9 H11 SING N N 65 A1I4X C11 H13 SING N N 66 A1I4X C12 H15 SING N N 67 A1I4X C12 H14 SING N N 68 A1I4X C14 H17 SING N N 69 A1I4X C16 H20 SING N N 70 A1I4X C16 H21 SING N N 71 A1I4X C18 H24 SING N N 72 A1I4X C18 H25 SING N N 73 A1I4X C19 H27 SING N N 74 A1I4X C19 H26 SING N N 75 A1I4X C23 H32 SING N N 76 A1I4X N5 H34 SING N N 77 A1I4X N5 H33 SING N N 78 A1I4X C25 H35 SING N N 79 A1I4X C27 H37 SING N N 80 A1I4X C30 H41 SING N N 81 A1I4X C30 H39 SING N N 82 A1I4X C30 H40 SING N N 83 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1I4X InChI InChI 1.06 "InChI=1S/C30H41N5O4/c1-32-29(37)25(16-20-12-14-33-15-13-20)34-30(38)26-17-22(21-8-4-3-5-9-21)19-35(26)28(36)18-24(31)23-10-6-7-11-27(23)39-2/h6-7,10-15,21-22,24-26H,3-5,8-9,16-19,31H2,1-2H3,(H,32,37)(H,34,38)/t22-,24+,25+,26+/m1/s1" A1I4X InChIKey InChI 1.06 ZDWZDLUIZUBTKV-DNZIZEQUSA-N A1I4X SMILES_CANONICAL CACTVS 3.385 "CNC(=O)[C@H](Cc1ccncc1)NC(=O)[C@@H]2C[C@H](CN2C(=O)C[C@H](N)c3ccccc3OC)C4CCCCC4" A1I4X SMILES CACTVS 3.385 "CNC(=O)[CH](Cc1ccncc1)NC(=O)[CH]2C[CH](CN2C(=O)C[CH](N)c3ccccc3OC)C4CCCCC4" A1I4X SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CNC(=O)[C@H](Cc1ccncc1)NC(=O)[C@@H]2C[C@H](CN2C(=O)C[C@@H](c3ccccc3OC)N)C4CCCCC4" A1I4X SMILES "OpenEye OEToolkits" 2.0.7 "CNC(=O)C(Cc1ccncc1)NC(=O)C2CC(CN2C(=O)CC(c3ccccc3OC)N)C4CCCCC4" # _pdbx_chem_comp_identifier.comp_id A1I4X _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S},4~{S})-1-[(3~{S})-3-azanyl-3-(2-methoxyphenyl)propanoyl]-4-cyclohexyl-~{N}-[(2~{S})-1-(methylamino)-1-oxidanylidene-3-pyridin-4-yl-propan-2-yl]pyrrolidine-2-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1I4X "Create component" 2025-02-27 PDBE A1I4X "Initial release" 2025-10-08 RCSB #