data_A1I52 # _chem_comp.id A1I52 _chem_comp.name "~{N}-[(1~{S},2~{S})-6-azanyl-1-[5-[[4-[2-(3,4-dichlorophenyl)ethoxy]phenyl]methyl]-1,2,4-oxadiazol-3-yl]-1-oxidanyl-hexan-2-yl]-4-fluoranyl-benzamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C30 H31 Cl2 F N4 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-12 _chem_comp.pdbx_modified_date 2025-03-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 601.496 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1I52 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9QFU _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1I52 C1 C1 C 0 1 N N N N N N 22.576 -33.404 -19.056 4.356 -0.957 -3.385 C1 A1I52 1 A1I52 C2 C2 C 0 1 N N N N N N 21.466 -33.362 -18.081 3.975 -0.359 -2.028 C2 A1I52 2 A1I52 C3 C3 C 0 1 N N N N N N 20.226 -32.755 -18.696 4.265 -1.377 -0.923 C3 A1I52 3 A1I52 C4 C4 C 0 1 N N S N N N 19.067 -32.641 -17.737 3.885 -0.779 0.433 C4 A1I52 4 A1I52 C5 C5 C 0 1 N N N N N N 18.745 -34.359 -16.022 4.442 1.585 0.243 C5 A1I52 5 A1I52 C6 C6 C 0 1 Y N N N N N 18.427 -35.789 -15.743 5.317 2.739 0.535 C6 A1I52 6 A1I52 C7 C7 C 0 1 Y N N N N N 19.248 -36.588 -14.936 4.997 4.005 0.039 C7 A1I52 7 A1I52 C8 C8 C 0 1 Y N N N N N 18.894 -37.900 -14.650 5.818 5.077 0.315 C8 A1I52 8 A1I52 C11 C9 C 0 1 Y N N N N N 17.267 -36.338 -16.293 6.464 2.569 1.313 C11 A1I52 9 A1I52 C12 C10 C 0 1 N N S N N N 17.806 -31.857 -18.260 4.056 -1.839 1.523 C12 A1I52 10 A1I52 C15 C11 C 0 1 N N N N N N 14.003 -32.716 -15.227 0.129 -4.925 1.878 C15 A1I52 11 A1I52 C16 C12 C 0 1 Y N N N N N 12.768 -31.855 -15.356 -1.025 -4.327 1.115 C16 A1I52 12 A1I52 C17 C13 C 0 1 Y N N N N N 12.562 -30.782 -14.485 -1.410 -4.874 -0.095 C17 A1I52 13 A1I52 C18 C14 C 0 1 Y N N N N N 11.417 -30.007 -14.560 -2.467 -4.328 -0.797 C18 A1I52 14 A1I52 C19 C15 C 0 1 Y N N N N N 10.417 -30.345 -15.464 -3.143 -3.229 -0.286 C19 A1I52 15 A1I52 C21 C16 C 0 1 N N N N N N 6.977 -29.210 -15.783 -5.971 -1.096 -1.300 C21 A1I52 16 A1I52 C23 C17 C 0 1 Y N N N N N 4.539 -28.916 -16.212 -7.727 -0.090 0.174 C23 A1I52 17 A1I52 C24 C18 C 0 1 Y N N N N N 3.403 -28.979 -16.996 -8.352 1.001 0.746 C24 A1I52 18 A1I52 C27 C19 C 0 1 Y N N N N N 5.822 -29.957 -17.945 -6.214 1.372 -0.969 C27 A1I52 19 A1I52 N N1 N 0 1 N N N N N N 24.967 -33.806 -19.442 4.431 -0.513 -5.792 N A1I52 20 A1I52 C C20 C 0 1 N N N N N N 23.879 -33.906 -18.455 4.066 0.061 -4.490 C A1I52 21 A1I52 O O1 O 0 1 N N N N N N 18.919 -33.563 -15.102 3.441 1.737 -0.431 O A1I52 22 A1I52 CL CL1 CL 0 0 N N N N N N 2.031 -29.613 -19.202 -8.696 3.652 1.178 CL A1I52 23 A1I52 CL1 CL2 CL 0 0 N N N N N N 4.744 -30.828 -20.258 -6.287 4.071 -0.763 CL1 A1I52 24 A1I52 N1 N2 N 0 1 N N N N N N 18.765 -33.998 -17.314 4.753 0.365 0.723 N1 A1I52 25 A1I52 O1 O2 O 0 1 N N N N N N 18.294 -30.581 -18.536 5.388 -2.354 1.481 O1 A1I52 26 A1I52 N2 N3 N 0 1 Y N N N N N 17.005 -30.886 -16.136 3.163 -3.883 0.383 N2 A1I52 27 A1I52 O2 O3 O 0 1 Y N N N N N 15.875 -31.177 -15.300 2.217 -4.638 0.459 O2 A1I52 28 A1I52 N3 N4 N 0 1 Y N N N N N 15.761 -32.558 -17.010 1.949 -3.188 1.992 N3 A1I52 29 A1I52 O3 O4 O 0 1 N N N N N N 9.288 -29.546 -15.416 -4.184 -2.690 -0.974 O3 A1I52 30 A1I52 C9 C21 C 0 1 Y N N N N N 17.727 -38.395 -15.201 6.958 4.902 1.083 C9 A1I52 31 A1I52 C10 C22 C 0 1 Y N N N N N 16.894 -37.640 -16.007 7.278 3.648 1.583 C10 A1I52 32 A1I52 C13 C23 C 0 1 Y N N N N N 16.866 -31.745 -17.107 3.076 -2.960 1.293 C13 A1I52 33 A1I52 C14 C24 C 0 1 Y N N N N N 15.208 -32.164 -15.911 1.411 -4.256 1.454 C14 A1I52 34 A1I52 C20 C25 C 0 1 N N N N N N 8.125 -30.042 -16.084 -4.834 -1.561 -0.388 C20 A1I52 35 A1I52 C22 C26 C 0 1 Y N N N N N 5.769 -29.375 -16.680 -6.656 0.095 -0.681 C22 A1I52 36 A1I52 C25 C27 C 0 1 Y N N N N N 3.470 -29.536 -18.246 -7.911 2.281 0.459 C25 A1I52 37 A1I52 C26 C28 C 0 1 Y N N N N N 4.677 -30.044 -18.718 -6.842 2.467 -0.401 C26 A1I52 38 A1I52 C28 C29 C 0 1 Y N N N N N 10.590 -31.436 -16.319 -2.756 -2.683 0.929 C28 A1I52 39 A1I52 C29 C30 C 0 1 Y N N N N N 11.755 -32.187 -16.249 -1.701 -3.236 1.629 C29 A1I52 40 A1I52 F F1 F 0 1 N N N N N N 17.402 -39.685 -14.973 7.759 5.957 1.350 F A1I52 41 A1I52 H1 H1 H 0 1 N N N N N N 22.739 -32.388 -19.445 5.417 -1.205 -3.388 H1 A1I52 42 A1I52 H2 H2 H 0 1 N N N N N N 22.291 -34.072 -19.882 3.771 -1.860 -3.560 H2 A1I52 43 A1I52 H3 H3 H 0 1 N N N N N N 21.239 -34.386 -17.751 4.560 0.544 -1.853 H3 A1I52 44 A1I52 H4 H4 H 0 1 N N N N N N 21.771 -32.756 -17.215 2.914 -0.111 -2.025 H4 A1I52 45 A1I52 H5 H5 H 0 1 N N N N N N 20.476 -31.747 -19.060 3.680 -2.280 -1.099 H5 A1I52 46 A1I52 H6 H6 H 0 1 N N N N N N 19.915 -33.384 -19.543 5.326 -1.625 -0.926 H6 A1I52 47 A1I52 H7 H7 H 0 1 N N N N N N 19.430 -32.090 -16.857 2.846 -0.449 0.407 H7 A1I52 48 A1I52 H8 H8 H 0 1 N N N N N N 20.163 -36.180 -14.533 4.109 4.142 -0.560 H8 A1I52 49 A1I52 H9 H9 H 0 1 N N N N N N 19.513 -38.516 -14.015 5.571 6.057 -0.069 H9 A1I52 50 A1I52 H10 H10 H 0 1 N N N N N N 16.653 -35.739 -16.950 6.714 1.593 1.703 H10 A1I52 51 A1I52 H11 H11 H 0 1 N N N N N N 17.352 -32.363 -19.125 3.871 -1.389 2.499 H11 A1I52 52 A1I52 H12 H12 H 0 1 N N N N N N 13.782 -33.703 -15.660 -0.025 -4.773 2.946 H12 A1I52 53 A1I52 H13 H13 H 0 1 N N N N N N 14.235 -32.829 -14.158 0.189 -5.993 1.667 H13 A1I52 54 A1I52 H14 H14 H 0 1 N N N N N N 13.309 -30.553 -13.740 -0.883 -5.729 -0.493 H14 A1I52 55 A1I52 H15 H15 H 0 1 N N N N N N 11.302 -29.145 -13.920 -2.767 -4.755 -1.743 H15 A1I52 56 A1I52 H16 H16 H 0 1 N N N N N N 7.299 -28.160 -15.846 -5.566 -0.818 -2.273 H16 A1I52 57 A1I52 H17 H17 H 0 1 N N N N N N 6.662 -29.435 -14.753 -6.691 -1.905 -1.424 H17 A1I52 58 A1I52 H18 H18 H 0 1 N N N N N N 4.473 -28.503 -15.216 -8.071 -1.089 0.398 H18 A1I52 59 A1I52 H19 H19 H 0 1 N N N N N N 2.466 -28.591 -16.625 -9.186 0.855 1.417 H19 A1I52 60 A1I52 H20 H20 H 0 1 N N N N N N 6.758 -30.341 -18.323 -5.377 1.517 -1.637 H20 A1I52 61 A1I52 H21 H21 H 0 1 N N N N N N 25.818 -34.139 -19.036 3.950 -1.386 -5.950 H21 A1I52 62 A1I52 H22 H22 H 0 1 N N N N N N 24.742 -34.360 -20.244 4.249 0.140 -6.539 H22 A1I52 63 A1I52 H24 H24 H 0 1 N N N N N N 23.758 -34.957 -18.153 3.005 0.309 -4.486 H24 A1I52 64 A1I52 H25 H25 H 0 1 N N N N N N 24.131 -33.297 -17.574 4.651 0.964 -4.314 H25 A1I52 65 A1I52 H26 H26 H 0 1 N N N N N N 18.565 -34.687 -18.011 5.551 0.244 1.260 H26 A1I52 66 A1I52 H27 H27 H 0 1 N N N N N N 17.588 -30.035 -18.861 5.622 -2.770 0.640 H27 A1I52 67 A1I52 H28 H28 H 0 1 N N N N N N 15.978 -38.055 -16.402 8.165 3.518 2.184 H28 A1I52 68 A1I52 H29 H29 H 0 1 N N N N N N 7.925 -31.070 -15.749 -4.114 -0.751 -0.264 H29 A1I52 69 A1I52 H30 H30 H 0 1 N N N N N N 8.301 -30.038 -17.170 -5.239 -1.839 0.585 H30 A1I52 70 A1I52 H31 H31 H 0 1 N N N N N N 9.820 -31.694 -17.031 -3.283 -1.830 1.330 H31 A1I52 71 A1I52 H32 H32 H 0 1 N N N N N N 11.877 -33.042 -16.898 -1.399 -2.811 2.575 H32 A1I52 72 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1I52 CL1 C26 SING N N 1 A1I52 N C SING N N 2 A1I52 CL C25 SING N N 3 A1I52 C1 C SING N N 4 A1I52 C1 C2 SING N N 5 A1I52 C26 C25 DOUB Y N 6 A1I52 C26 C27 SING Y N 7 A1I52 C3 C2 SING N N 8 A1I52 C3 C4 SING N N 9 A1I52 O1 C12 SING N N 10 A1I52 C12 C4 SING N N 11 A1I52 C12 C13 SING N N 12 A1I52 C25 C24 SING Y N 13 A1I52 C27 C22 DOUB Y N 14 A1I52 C4 N1 SING N N 15 A1I52 N1 C5 SING N N 16 A1I52 C13 N3 SING Y N 17 A1I52 C13 N2 DOUB Y N 18 A1I52 N3 C14 DOUB Y N 19 A1I52 C24 C23 DOUB Y N 20 A1I52 C22 C23 SING Y N 21 A1I52 C22 C21 SING N N 22 A1I52 C28 C29 DOUB Y N 23 A1I52 C28 C19 SING Y N 24 A1I52 C11 C10 DOUB Y N 25 A1I52 C11 C6 SING Y N 26 A1I52 C29 C16 SING Y N 27 A1I52 N2 O2 SING Y N 28 A1I52 C20 C21 SING N N 29 A1I52 C20 O3 SING N N 30 A1I52 C5 C6 SING N N 31 A1I52 C5 O DOUB N N 32 A1I52 C10 C9 SING Y N 33 A1I52 C14 O2 SING Y N 34 A1I52 C14 C15 SING N N 35 A1I52 C6 C7 DOUB Y N 36 A1I52 C19 O3 SING N N 37 A1I52 C19 C18 DOUB Y N 38 A1I52 C16 C15 SING N N 39 A1I52 C16 C17 DOUB Y N 40 A1I52 C9 F SING N N 41 A1I52 C9 C8 DOUB Y N 42 A1I52 C7 C8 SING Y N 43 A1I52 C18 C17 SING Y N 44 A1I52 C1 H1 SING N N 45 A1I52 C1 H2 SING N N 46 A1I52 C2 H3 SING N N 47 A1I52 C2 H4 SING N N 48 A1I52 C3 H5 SING N N 49 A1I52 C3 H6 SING N N 50 A1I52 C4 H7 SING N N 51 A1I52 C7 H8 SING N N 52 A1I52 C8 H9 SING N N 53 A1I52 C11 H10 SING N N 54 A1I52 C12 H11 SING N N 55 A1I52 C15 H12 SING N N 56 A1I52 C15 H13 SING N N 57 A1I52 C17 H14 SING N N 58 A1I52 C18 H15 SING N N 59 A1I52 C21 H16 SING N N 60 A1I52 C21 H17 SING N N 61 A1I52 C23 H18 SING N N 62 A1I52 C24 H19 SING N N 63 A1I52 C27 H20 SING N N 64 A1I52 N H21 SING N N 65 A1I52 N H22 SING N N 66 A1I52 C H24 SING N N 67 A1I52 C H25 SING N N 68 A1I52 N1 H26 SING N N 69 A1I52 O1 H27 SING N N 70 A1I52 C10 H28 SING N N 71 A1I52 C20 H29 SING N N 72 A1I52 C20 H30 SING N N 73 A1I52 C28 H31 SING N N 74 A1I52 C29 H32 SING N N 75 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1I52 InChI InChI 1.06 "InChI=1S/C30H31Cl2FN4O4/c31-24-13-6-20(17-25(24)32)14-16-40-23-11-4-19(5-12-23)18-27-36-29(37-41-27)28(38)26(3-1-2-15-34)35-30(39)21-7-9-22(33)10-8-21/h4-13,17,26,28,38H,1-3,14-16,18,34H2,(H,35,39)/t26-,28-/m0/s1" A1I52 InChIKey InChI 1.06 VDZJQCQLVMCFBD-XCZPVHLTSA-N A1I52 SMILES_CANONICAL CACTVS 3.385 "NCCCC[C@H](NC(=O)c1ccc(F)cc1)[C@H](O)c2noc(Cc3ccc(OCCc4ccc(Cl)c(Cl)c4)cc3)n2" A1I52 SMILES CACTVS 3.385 "NCCCC[CH](NC(=O)c1ccc(F)cc1)[CH](O)c2noc(Cc3ccc(OCCc4ccc(Cl)c(Cl)c4)cc3)n2" A1I52 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1Cc2nc(no2)[C@H]([C@H](CCCCN)NC(=O)c3ccc(cc3)F)O)OCCc4ccc(c(c4)Cl)Cl" A1I52 SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1Cc2nc(no2)C(C(CCCCN)NC(=O)c3ccc(cc3)F)O)OCCc4ccc(c(c4)Cl)Cl" # _pdbx_chem_comp_identifier.comp_id A1I52 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[(1~{S},2~{S})-6-azanyl-1-[5-[[4-[2-(3,4-dichlorophenyl)ethoxy]phenyl]methyl]-1,2,4-oxadiazol-3-yl]-1-oxidanyl-hexan-2-yl]-4-fluoranyl-benzamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1I52 "Create component" 2025-03-12 PDBE A1I52 "Modify PCM" 2025-03-12 PDBE A1I52 "Initial release" 2025-03-26 RCSB # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id A1I52 _pdbx_chem_comp_pcm.modified_residue_id SER _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C12 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom OG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #