data_A1I8C # _chem_comp.id A1I8C _chem_comp.name "~{N}-[4-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]butyl]-3-sulfanyl-benzamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H21 N3 O2 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-26 _chem_comp.pdbx_modified_date 2026-04-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 351.487 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1I8C _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9QO7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1I8C C01 C1 C 0 1 N N N N N N 27.466 -17.332 -11.030 -2.799 -0.043 -0.730 C01 A1I8C 1 A1I8C O01 O1 O 0 1 N N N N N N 26.164 -19.446 -15.305 3.398 1.916 -0.038 O01 A1I8C 2 A1I8C S01 S1 S 0 1 N N N N N N 28.617 -23.764 -16.855 8.516 0.479 0.350 S01 A1I8C 3 A1I8C C02 C2 C 0 1 Y N N N N N 26.976 -21.984 -15.529 5.794 0.493 0.095 C02 A1I8C 4 A1I8C C03 C3 C 0 1 Y N N N N N 27.317 -23.309 -15.674 6.940 -0.286 0.158 C03 A1I8C 5 A1I8C C04 C4 C 0 1 Y N N N N N 26.666 -24.267 -14.920 6.845 -1.671 0.070 C04 A1I8C 6 A1I8C C05 C5 C 0 1 Y N N N N N 25.675 -23.888 -14.028 5.612 -2.275 -0.082 C05 A1I8C 7 A1I8C C06 C6 C 0 1 Y N N N N N 25.328 -22.558 -13.883 4.465 -1.508 -0.145 C06 A1I8C 8 A1I8C C07 C7 C 0 1 Y N N N N N 25.985 -21.616 -14.635 4.550 -0.117 -0.058 C07 A1I8C 9 A1I8C C08 C8 C 0 1 N N N N N N 25.668 -20.144 -14.523 3.323 0.705 -0.120 C08 A1I8C 10 A1I8C N01 N1 N 0 1 N N N N N N 24.820 -19.572 -13.494 2.121 0.113 -0.267 N01 A1I8C 11 A1I8C C09 C9 C 0 1 N N N N N N 24.638 -18.132 -13.534 0.905 0.928 -0.329 C09 A1I8C 12 A1I8C C10 C10 C 0 1 N N N N N N 25.846 -17.404 -12.919 -0.312 0.017 -0.497 C10 A1I8C 13 A1I8C O02 O2 O 0 1 N N N N N N 29.564 -14.252 -8.147 -6.045 -2.785 0.924 O02 A1I8C 14 A1I8C N02 N2 N 0 1 N N N N N N 29.530 -16.448 -7.174 -6.888 -0.738 0.537 N02 A1I8C 15 A1I8C C11 C11 C 0 1 N N N N N N 29.502 -15.415 -8.284 -6.001 -1.722 0.336 C11 A1I8C 16 A1I8C N03 N3 N 0 1 N N N N N N 29.382 -16.140 -9.589 -5.062 -1.428 -0.574 N03 A1I8C 17 A1I8C S02 S2 S 0 1 N N N N N N 26.882 -18.042 -8.538 -4.462 1.518 0.856 S02 A1I8C 18 A1I8C C12 C12 C 0 1 N N N N N N 28.068 -18.373 -7.282 -6.278 1.642 0.535 C12 A1I8C 19 A1I8C C13 C13 C 0 1 N N R N N N 29.424 -17.703 -7.773 -6.551 0.398 -0.335 C13 A1I8C 20 A1I8C C14 C14 C 0 1 N N S N N N 29.343 -17.516 -9.298 -5.301 -0.070 -1.088 C14 A1I8C 21 A1I8C C15 C15 C 0 1 N N S N N N 28.017 -18.129 -9.809 -4.068 0.808 -0.794 C15 A1I8C 22 A1I8C C16 C16 C 0 1 N N N N N N 26.281 -18.092 -11.627 -1.582 0.868 -0.562 C16 A1I8C 23 A1I8C H1 H1 H 0 1 N N N N N N 28.256 -17.226 -11.788 -2.862 -0.726 0.118 H1 A1I8C 24 A1I8C H2 H2 H 0 1 N N N N N N 27.137 -16.335 -10.702 -2.699 -0.617 -1.651 H2 A1I8C 25 A1I8C H3 H3 H 0 1 N N N N N N 28.663 -25.056 -16.722 8.664 0.536 1.685 H3 A1I8C 26 A1I8C H4 H4 H 0 1 N N N N N N 27.482 -21.230 -16.113 5.865 1.568 0.168 H4 A1I8C 27 A1I8C H5 H5 H 0 1 N N N N N N 26.929 -25.309 -15.026 7.738 -2.276 0.119 H5 A1I8C 28 A1I8C H6 H6 H 0 1 N N N N N N 25.169 -24.640 -13.440 5.544 -3.350 -0.150 H6 A1I8C 29 A1I8C H7 H7 H 0 1 N N N N N N 24.553 -22.265 -13.190 3.503 -1.984 -0.264 H7 A1I8C 30 A1I8C H8 H8 H 0 1 N N N N N N 24.384 -20.139 -12.795 2.061 -0.853 -0.332 H8 A1I8C 31 A1I8C H9 H9 H 0 1 N N N N N N 24.521 -17.814 -14.580 0.805 1.502 0.593 H9 A1I8C 32 A1I8C H10 H10 H 0 1 N N N N N N 23.733 -17.868 -12.967 0.968 1.611 -1.176 H10 A1I8C 33 A1I8C H11 H11 H 0 1 N N N N N N 26.681 -17.417 -13.636 -0.212 -0.557 -1.419 H11 A1I8C 34 A1I8C H12 H12 H 0 1 N N N N N N 25.568 -16.363 -12.699 -0.375 -0.666 0.350 H12 A1I8C 35 A1I8C H13 H13 H 0 1 N N N N N N 29.610 -16.264 -6.194 -7.635 -0.771 1.156 H13 A1I8C 36 A1I8C H14 H14 H 0 1 N N N N N N 29.338 -15.724 -10.497 -4.339 -2.013 -0.845 H14 A1I8C 37 A1I8C H15 H15 H 0 1 N N N N N N 27.747 -17.931 -6.327 -6.840 1.588 1.467 H15 A1I8C 38 A1I8C H16 H16 H 0 1 N N N N N N 28.201 -19.458 -7.158 -6.514 2.559 -0.004 H16 A1I8C 39 A1I8C H17 H17 H 0 1 N N N N N N 30.269 -18.359 -7.517 -7.368 0.596 -1.029 H17 A1I8C 40 A1I8C H18 H18 H 0 1 N N N N N N 30.186 -18.042 -9.770 -5.500 -0.102 -2.159 H18 A1I8C 41 A1I8C H19 H19 H 0 1 N N N N N N 28.160 -19.186 -10.077 -3.967 1.594 -1.542 H19 A1I8C 42 A1I8C H20 H20 H 0 1 N N N N N N 25.446 -18.093 -10.911 -1.519 1.551 -1.409 H20 A1I8C 43 A1I8C H21 H21 H 0 1 N N N N N N 26.580 -19.128 -11.844 -1.682 1.442 0.360 H21 A1I8C 44 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1I8C S01 C03 SING N N 1 A1I8C C03 C02 DOUB Y N 2 A1I8C C03 C04 SING Y N 3 A1I8C C02 C07 SING Y N 4 A1I8C O01 C08 DOUB N N 5 A1I8C C04 C05 DOUB Y N 6 A1I8C C07 C08 SING N N 7 A1I8C C07 C06 DOUB Y N 8 A1I8C C08 N01 SING N N 9 A1I8C C05 C06 SING Y N 10 A1I8C C09 N01 SING N N 11 A1I8C C09 C10 SING N N 12 A1I8C C10 C16 SING N N 13 A1I8C C16 C01 SING N N 14 A1I8C C01 C15 SING N N 15 A1I8C C15 C14 SING N N 16 A1I8C C15 S02 SING N N 17 A1I8C N03 C14 SING N N 18 A1I8C N03 C11 SING N N 19 A1I8C C14 C13 SING N N 20 A1I8C S02 C12 SING N N 21 A1I8C C11 O02 DOUB N N 22 A1I8C C11 N02 SING N N 23 A1I8C C13 C12 SING N N 24 A1I8C C13 N02 SING N N 25 A1I8C C01 H1 SING N N 26 A1I8C C01 H2 SING N N 27 A1I8C S01 H3 SING N N 28 A1I8C C02 H4 SING N N 29 A1I8C C04 H5 SING N N 30 A1I8C C05 H6 SING N N 31 A1I8C C06 H7 SING N N 32 A1I8C N01 H8 SING N N 33 A1I8C C09 H9 SING N N 34 A1I8C C09 H10 SING N N 35 A1I8C C10 H11 SING N N 36 A1I8C C10 H12 SING N N 37 A1I8C N02 H13 SING N N 38 A1I8C N03 H14 SING N N 39 A1I8C C12 H15 SING N N 40 A1I8C C12 H16 SING N N 41 A1I8C C13 H17 SING N N 42 A1I8C C14 H18 SING N N 43 A1I8C C15 H19 SING N N 44 A1I8C C16 H20 SING N N 45 A1I8C C16 H21 SING N N 46 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1I8C InChI InChI 1.06 "InChI=1S/C16H21N3O2S2/c20-15(10-4-3-5-11(22)8-10)17-7-2-1-6-13-14-12(9-23-13)18-16(21)19-14/h3-5,8,12-14,22H,1-2,6-7,9H2,(H,17,20)(H2,18,19,21)/t12-,13-,14-/m0/s1" A1I8C InChIKey InChI 1.06 NCPKXTYOOBVCGB-IHRRRGAJSA-N A1I8C SMILES_CANONICAL CACTVS 3.385 "Sc1cccc(c1)C(=O)NCCCC[C@@H]2SC[C@@H]3NC(=O)N[C@H]23" A1I8C SMILES CACTVS 3.385 "Sc1cccc(c1)C(=O)NCCCC[CH]2SC[CH]3NC(=O)N[CH]23" A1I8C SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)S)C(=O)NCCCC[C@H]2[C@@H]3[C@H](CS2)NC(=O)N3" A1I8C SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)S)C(=O)NCCCCC2C3C(CS2)NC(=O)N3" # _pdbx_chem_comp_identifier.comp_id A1I8C _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[4-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]butyl]-3-sulfanyl-benzamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1I8C "Create component" 2025-03-26 PDBE A1I8C "Initial release" 2026-04-08 RCSB #