data_A1I8Q # _chem_comp.id A1I8Q _chem_comp.name "2-[3-[2-[3-(methylamino)propylsulfanylmethyl]prop-2-enylsulfanylmethyl]phenyl]ethanoic acid" _chem_comp.type "L-peptide linking" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C17 H25 N O2 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-26 _chem_comp.pdbx_modified_date 2026-03-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 339.516 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1I8Q _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9QDU _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1I8Q CA C1 C 0 1 N N N N Y N -17.582 -14.523 0.831 -6.413 -0.323 0.192 C50 A1I8Q 1 A1I8Q C C2 C 0 1 N N N N Y Y -18.903 -13.756 0.711 -6.460 0.231 -1.209 C A1I8Q 2 A1I8Q O O1 O 0 1 N N N N Y Y -19.555 -13.868 -0.347 -5.504 0.113 -1.938 O A1I8Q 3 A1I8Q C2 C3 C 0 1 Y N N Y Y N -16.662 -14.202 -0.324 -5.073 -0.970 0.431 C2 A1I8Q 4 A1I8Q C1 C4 C 0 1 N N N N N N -12.868 -3.312 0.352 9.200 -2.304 -1.005 C1 A1I8Q 5 A1I8Q C11 C5 C 0 1 N N N N Y N -13.949 -11.677 -1.160 -1.656 -0.003 1.713 C11 A1I8Q 6 A1I8Q C12 C6 C 0 1 Y N N N Y N -14.905 -12.831 -1.282 -2.797 -0.817 1.159 C12 A1I8Q 7 A1I8Q C13 C7 C 0 1 Y N N N N N -15.059 -13.494 -2.486 -2.615 -2.157 0.872 C13 A1I8Q 8 A1I8Q C14 C8 C 0 1 Y N N N N N -16.001 -14.499 -2.617 -3.661 -2.901 0.358 C14 A1I8Q 9 A1I8Q C15 C9 C 0 1 Y N N N N N -16.796 -14.849 -1.539 -4.889 -2.308 0.138 C15 A1I8Q 10 A1I8Q C21 C10 C 0 1 Y N N N Y N -15.709 -13.196 -0.208 -4.027 -0.224 0.939 C21 A1I8Q 11 A1I8Q C22 C11 C 0 1 N N N N N N -11.024 -9.456 -1.233 1.372 3.624 -0.017 C22 A1I8Q 12 A1I8Q C3 C12 C 0 1 N N N N Y N -12.423 -4.966 -1.324 7.103 -1.103 -0.856 CA A1I8Q 13 A1I8Q C4 C13 C 0 1 N N N N Y N -11.631 -4.763 -2.599 6.202 -0.299 0.082 C4 A1I8Q 14 A1I8Q C5 C14 C 0 1 N N N N Y N -10.985 -6.068 -3.060 4.946 0.143 -0.671 C5 A1I8Q 15 A1I8Q C7 C15 C 0 1 N N N N Y N -11.762 -8.796 -3.434 2.466 1.524 -0.615 C7 A1I8Q 16 A1I8Q C8 C16 C 0 1 N N N N Y N -12.032 -9.062 -1.983 1.471 2.332 0.178 C8 A1I8Q 17 A1I8Q C9 C17 C 0 1 N N N N Y N -13.443 -8.901 -1.501 0.591 1.654 1.196 C9 A1I8Q 18 A1I8Q N N1 N 0 1 N N N Y Y N -13.279 -3.906 -0.921 8.309 -1.527 -0.133 N A1I8Q 19 A1I8Q S10 S1 S 0 1 N N N N Y N -14.598 -10.208 -2.017 -0.717 0.730 0.345 S10 A1I8Q 20 A1I8Q S6 S2 S 0 1 N N N N Y N -12.063 -7.120 -4.080 3.877 1.097 0.442 S6 A1I8Q 21 A1I8Q HA1 H1 H 0 1 N N N N Y N -17.792 -15.603 0.834 -6.559 0.486 0.908 HA3 A1I8Q 22 A1I8Q HA2 H2 H 0 1 N N N N Y N -17.088 -14.243 1.773 -7.202 -1.065 0.316 HA2 A1I8Q 23 A1I8Q H1A H4 H 0 1 N N N N N N -13.560 -2.500 0.619 8.677 -3.191 -1.362 H1A A1I8Q 24 A1I8Q H1B H5 H 0 1 N N N N N N -12.886 -4.081 1.138 9.500 -1.692 -1.856 H1B A1I8Q 25 A1I8Q H1C H6 H 0 1 N N N N N N -11.849 -2.909 0.256 10.085 -2.605 -0.444 H1C A1I8Q 26 A1I8Q H11A H7 H 0 0 N N N N Y N -12.984 -11.959 -1.607 -2.050 0.790 2.349 H11A A1I8Q 27 A1I8Q H11B H8 H 0 0 N N N N Y N -13.804 -11.439 -0.096 -1.001 -0.648 2.299 H11B A1I8Q 28 A1I8Q H13 H9 H 0 1 N N N N N N -14.440 -13.226 -3.329 -1.655 -2.620 1.044 H13 A1I8Q 29 A1I8Q H14 H10 H 0 1 N N N N N N -16.116 -15.011 -3.561 -3.518 -3.948 0.133 H14 A1I8Q 30 A1I8Q H15 H11 H 0 1 N N N N N N -17.528 -15.635 -1.648 -5.706 -2.891 -0.263 H15 A1I8Q 31 A1I8Q H21 H12 H 0 1 N N N N Y N -15.591 -12.687 0.737 -4.169 0.823 1.164 H21 A1I8Q 32 A1I8Q H22A H13 H 0 0 N N N N N N -11.185 -9.689 -0.191 0.659 4.203 0.551 H22A A1I8Q 33 A1I8Q H22B H14 H 0 0 N N N N N N -10.036 -9.546 -1.660 2.003 4.110 -0.747 H22B A1I8Q 34 A1I8Q H3B H15 H 0 1 N N N N Y N -11.703 -5.139 -0.510 6.565 -1.982 -1.212 H3B A1I8Q 35 A1I8Q H3A H16 H 0 1 N N N N Y N -13.046 -5.862 -1.459 7.389 -0.483 -1.706 H3A A1I8Q 36 A1I8Q H4B H17 H 0 1 N N N N Y N -12.306 -4.399 -3.387 5.917 -0.919 0.932 H4B A1I8Q 37 A1I8Q H4A H18 H 0 1 N N N N Y N -10.843 -4.017 -2.417 6.740 0.580 0.438 H4A A1I8Q 38 A1I8Q H5B H19 H 0 1 N N N N Y N -10.090 -5.820 -3.649 5.231 0.763 -1.521 H5B A1I8Q 39 A1I8Q H5A H20 H 0 1 N N N N Y N -10.690 -6.640 -2.168 4.408 -0.735 -1.027 H5A A1I8Q 40 A1I8Q H7B H21 H 0 1 N N N N Y N -12.393 -9.486 -4.014 1.990 0.611 -0.972 H7B A1I8Q 41 A1I8Q H7A H22 H 0 1 N N N N Y N -10.702 -9.029 -3.615 2.813 2.110 -1.466 H7A A1I8Q 42 A1I8Q H9A H23 H 0 1 N N N N Y N -13.425 -8.878 -0.401 1.189 0.969 1.795 H9A A1I8Q 43 A1I8Q H9B H24 H 0 1 N N N N Y N -13.824 -7.942 -1.881 0.140 2.406 1.845 H9B A1I8Q 44 A1I8Q H2 H25 H 0 1 N Y N Y Y N -14.208 -4.262 -0.824 8.069 -2.050 0.696 H2 A1I8Q 45 A1I8Q OXT O2 O 0 1 N Y N N Y Y -19.397 -12.897 1.807 -7.565 0.856 -1.647 OXT A1I8Q 46 A1I8Q HXT H25 H 0 1 N Y N N Y Y -20.222 -12.500 1.552 -7.548 1.194 -2.552 HXT A1I8Q 47 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1I8Q C1 N SING N N 1 A1I8Q N C3 SING N N 2 A1I8Q C3 C4 SING N N 3 A1I8Q C4 C5 SING N N 4 A1I8Q C5 S6 SING N N 5 A1I8Q S6 C7 SING N N 6 A1I8Q C7 C8 SING N N 7 A1I8Q C8 C9 SING N N 8 A1I8Q C9 S10 SING N N 9 A1I8Q S10 C11 SING N N 10 A1I8Q C11 C12 SING N N 11 A1I8Q C12 C13 DOUB Y N 12 A1I8Q C13 C14 SING Y N 13 A1I8Q C14 C15 DOUB Y N 14 A1I8Q C15 C2 SING Y N 15 A1I8Q C2 CA SING N N 16 A1I8Q CA C SING N N 17 A1I8Q C O DOUB N N 18 A1I8Q C2 C21 DOUB Y N 19 A1I8Q C8 C22 DOUB N N 20 A1I8Q C21 C12 SING Y N 21 A1I8Q CA HA1 SING N N 22 A1I8Q CA HA2 SING N N 23 A1I8Q C1 H1A SING N N 24 A1I8Q C1 H1B SING N N 25 A1I8Q C1 H1C SING N N 26 A1I8Q C11 H11A SING N N 27 A1I8Q C11 H11B SING N N 28 A1I8Q C13 H13 SING N N 29 A1I8Q C14 H14 SING N N 30 A1I8Q C15 H15 SING N N 31 A1I8Q C21 H21 SING N N 32 A1I8Q C22 H22A SING N N 33 A1I8Q C22 H22B SING N N 34 A1I8Q C3 H3B SING N N 35 A1I8Q C3 H3A SING N N 36 A1I8Q C4 H4B SING N N 37 A1I8Q C4 H4A SING N N 38 A1I8Q C5 H5B SING N N 39 A1I8Q C5 H5A SING N N 40 A1I8Q C7 H7B SING N N 41 A1I8Q C7 H7A SING N N 42 A1I8Q C9 H9A SING N N 43 A1I8Q C9 H9B SING N N 44 A1I8Q N H2 SING N N 45 A1I8Q C OXT SING N N 46 A1I8Q OXT HXT SING N N 47 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1I8Q InChI InChI 1.06 "InChI=1S/C17H25NO2S2/c1-14(11-21-8-4-7-18-2)12-22-13-16-6-3-5-15(9-16)10-17(19)20/h3,5-6,9,18H,1,4,7-8,10-13H2,2H3,(H,19,20)" A1I8Q InChIKey InChI 1.06 VHHFTIAJKBKUOZ-UHFFFAOYSA-N A1I8Q SMILES_CANONICAL CACTVS 3.385 "CNCCCSCC(=C)CSCc1cccc(CC(O)=O)c1" A1I8Q SMILES CACTVS 3.385 "CNCCCSCC(=C)CSCc1cccc(CC(O)=O)c1" A1I8Q SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CNCCCSCC(=C)CSCc1cccc(c1)CC(=O)O" A1I8Q SMILES "OpenEye OEToolkits" 2.0.7 "CNCCCSCC(=C)CSCc1cccc(c1)CC(=O)O" # _pdbx_chem_comp_identifier.comp_id A1I8Q _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-[3-[2-[3-(methylamino)propylsulfanylmethyl]prop-2-enylsulfanylmethyl]phenyl]ethanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1I8Q "Create component" 2025-03-26 PDBE A1I8Q "Modify formula" 2025-03-27 PDBE A1I8Q "Modify PCM" 2025-04-08 PDBE A1I8Q "Modify atom id" 2025-04-09 PDBE A1I8Q "Initial release" 2026-03-18 RCSB # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id A1I8Q _pdbx_chem_comp_pcm.modified_residue_id ? _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Non-standard residue" _pdbx_chem_comp_pcm.position "Amino-acid side chain and backbone" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom ? _pdbx_chem_comp_pcm.modified_residue_id_linking_atom ? _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #