data_A1IA6 # _chem_comp.id A1IA6 _chem_comp.name "2-naphthalen-2-yl-5-oxidanyl-6-oxidanylidene-1H-pyrimidine-4-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H10 N2 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-05-10 _chem_comp.pdbx_modified_date 2024-06-14 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 282.251 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1IA6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9F9A _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1IA6 C1 C1 C 0 1 N N N N N N -14.290 26.316 -75.975 -2.550 0.635 0.003 C1 A1IA6 1 A1IA6 C2 C2 C 0 1 N N N N N N -15.524 25.980 -76.434 -3.312 -0.525 0.002 C2 A1IA6 2 A1IA6 C3 C3 C 0 1 N N N N N N -15.880 26.269 -77.806 -2.605 -1.812 0.001 C3 A1IA6 3 A1IA6 C7 C4 C 0 1 Y N N N N N -10.415 27.951 -79.720 2.936 -1.875 -0.001 C7 A1IA6 4 A1IA6 C8 C5 C 0 1 Y N N N N N -10.751 29.054 -80.534 3.672 -0.675 -0.000 C8 A1IA6 5 A1IA6 C9 C6 C 0 1 Y N N N N N -9.816 29.690 -81.385 5.077 -0.687 -0.002 C9 A1IA6 6 A1IA6 C10 C7 C 0 1 Y N N N N N -10.186 30.750 -82.154 5.762 0.489 -0.002 C10 A1IA6 7 A1IA6 C11 C8 C 0 1 Y N N N N N -11.484 31.230 -82.115 5.090 1.711 0.000 C11 A1IA6 8 A1IA6 C12 C9 C 0 1 Y N N N N N -12.418 30.647 -81.310 3.730 1.762 0.002 C12 A1IA6 9 A1IA6 C13 C10 C 0 1 Y N N N N N -12.080 29.543 -80.496 2.989 0.567 0.002 C13 A1IA6 10 A1IA6 C14 C11 C 0 1 Y N N N N N -13.014 28.911 -79.646 1.586 0.584 0.002 C14 A1IA6 11 A1IA6 O3 O1 O 0 1 N N N N N N -16.961 26.018 -78.338 -3.218 -2.865 -0.001 O3 A1IA6 12 A1IA6 O2 O2 O 0 1 N N N N N N -16.445 25.389 -75.664 -4.667 -0.472 0.003 O2 A1IA6 13 A1IA6 N N1 N 0 1 N N N N N N -14.874 26.879 -78.523 -1.254 -1.794 0.000 N A1IA6 14 A1IA6 C4 C12 C 0 1 N N N N N N -13.638 27.191 -77.988 -0.587 -0.603 0.002 C4 A1IA6 15 A1IA6 N1 N2 N 0 1 N N N N N N -13.305 26.930 -76.733 -1.211 0.549 0.003 N1 A1IA6 16 A1IA6 C C13 C 0 1 N N N N N N -13.944 26.008 -74.556 -3.211 1.959 -0.002 C A1IA6 17 A1IA6 O1 O3 O 0 1 N N N N N N -14.301 24.952 -74.029 -4.424 2.032 -0.006 O1 A1IA6 18 A1IA6 O O4 O 0 1 N N N N N N -13.245 26.932 -73.924 -2.468 3.082 -0.001 O A1IA6 19 A1IA6 C5 C14 C 0 1 Y N N N N N -12.653 27.840 -78.867 0.890 -0.613 0.001 C5 A1IA6 20 A1IA6 C6 C15 C 0 1 Y N N N N N -11.343 27.367 -78.913 1.580 -1.840 -0.005 C6 A1IA6 21 A1IA6 H4 H1 H 0 1 N N N N N N -9.407 27.565 -79.738 3.452 -2.824 -0.002 H4 A1IA6 22 A1IA6 H5 H2 H 0 1 N N N N N N -8.798 29.330 -81.425 5.611 -1.626 -0.003 H5 A1IA6 23 A1IA6 H6 H3 H 0 1 N N N N N N -9.460 31.221 -82.801 6.841 0.476 -0.002 H6 A1IA6 24 A1IA6 H7 H4 H 0 1 N N N N N N -11.760 32.075 -82.728 5.658 2.630 0.001 H7 A1IA6 25 A1IA6 H8 H5 H 0 1 N N N N N N -13.426 31.033 -81.295 3.223 2.716 0.004 H8 A1IA6 26 A1IA6 H9 H6 H 0 1 N N N N N N -14.030 29.277 -79.608 1.053 1.524 0.004 H9 A1IA6 27 A1IA6 H1 H7 H 0 1 N N N N N N -16.033 25.055 -74.876 -5.095 -1.340 0.002 H1 A1IA6 28 A1IA6 H2 H8 H 0 1 N N N N N N -15.047 27.108 -79.481 -0.758 -2.628 -0.000 H2 A1IA6 29 A1IA6 H H9 H 0 1 N N N N N N -13.076 26.648 -73.033 -2.945 3.924 -0.004 H A1IA6 30 A1IA6 H3 H10 H 0 1 N N N N N N -11.060 26.525 -78.299 1.022 -2.765 -0.006 H3 A1IA6 31 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IA6 O C SING N N 1 A1IA6 O1 C DOUB N N 2 A1IA6 C C1 SING N N 3 A1IA6 C1 C2 DOUB N N 4 A1IA6 O2 C2 SING N N 5 A1IA6 C2 C3 SING N N 6 A1IA6 C3 O3 DOUB N N 7 A1IA6 N C3 SING N N 8 A1IA6 C4 N SING N N 9 A1IA6 N1 C4 DOUB N N 10 A1IA6 C1 N1 SING N N 11 A1IA6 C5 C4 SING N N 12 A1IA6 C5 C6 SING Y N 13 A1IA6 C6 C7 DOUB Y N 14 A1IA6 C7 C8 SING Y N 15 A1IA6 C8 C9 SING Y N 16 A1IA6 C9 C10 DOUB Y N 17 A1IA6 C10 C11 SING Y N 18 A1IA6 C11 C12 DOUB Y N 19 A1IA6 C12 C13 SING Y N 20 A1IA6 C8 C13 DOUB Y N 21 A1IA6 C13 C14 SING Y N 22 A1IA6 C14 C5 DOUB Y N 23 A1IA6 C7 H4 SING N N 24 A1IA6 C9 H5 SING N N 25 A1IA6 C10 H6 SING N N 26 A1IA6 C11 H7 SING N N 27 A1IA6 C12 H8 SING N N 28 A1IA6 C14 H9 SING N N 29 A1IA6 O2 H1 SING N N 30 A1IA6 N H2 SING N N 31 A1IA6 O H SING N N 32 A1IA6 C6 H3 SING N N 33 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1IA6 InChI InChI 1.06 "InChI=1S/C15H10N2O4/c18-12-11(15(20)21)16-13(17-14(12)19)10-6-5-8-3-1-2-4-9(8)7-10/h1-7,18H,(H,20,21)(H,16,17,19)" A1IA6 InChIKey InChI 1.06 HQQIELXMZFSTOA-UHFFFAOYSA-N A1IA6 SMILES_CANONICAL CACTVS 3.385 "OC(=O)C1=C(O)C(=O)NC(=N1)c2ccc3ccccc3c2" A1IA6 SMILES CACTVS 3.385 "OC(=O)C1=C(O)C(=O)NC(=N1)c2ccc3ccccc3c2" A1IA6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc2cc(ccc2c1)C3=NC(=C(C(=O)N3)O)C(=O)O" A1IA6 SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc2cc(ccc2c1)C3=NC(=C(C(=O)N3)O)C(=O)O" # _pdbx_chem_comp_identifier.comp_id A1IA6 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-naphthalen-2-yl-5-oxidanyl-6-oxidanylidene-1~{H}-pyrimidine-4-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1IA6 "Create component" 2024-05-10 PDBE A1IA6 "Initial release" 2024-06-19 RCSB #