data_A1IB6 # _chem_comp.id A1IB6 _chem_comp.name "~{N}-[[(2~{R},3~{S},4~{R},5~{R})-5-[4-azanyl-5-(2-pyridin-3-ylethynyl)pyrrolo[2,3-d]pyrimidin-7-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl]-3-cyano-~{N}-ethyl-4-methoxy-benzenesulfonamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H27 N7 O6 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-05-20 _chem_comp.pdbx_modified_date 2024-08-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 589.622 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1IB6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9FEH _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1IB6 C2 C1 C 0 1 Y N N N N N 10.759 52.129 -13.477 -6.117 -1.791 0.166 C2 A1IB6 1 A1IB6 N3 N1 N 0 1 Y N N N N N 11.142 53.386 -13.164 -6.396 -3.086 0.286 N3 A1IB6 2 A1IB6 C4 C2 C 0 1 Y N N N N N 10.303 54.153 -12.465 -5.431 -3.987 0.338 C4 A1IB6 3 A1IB6 C6 C3 C 0 1 Y N N N N N 8.725 52.603 -12.320 -3.779 -2.395 0.154 C6 A1IB6 4 A1IB6 C8 C4 C 0 1 Y N N N N N 8.710 50.477 -13.132 -4.065 -0.122 -0.036 C8 A1IB6 5 A1IB6 C9 C5 C 0 1 N N N N N N 9.100 49.267 -13.804 -4.656 1.179 -0.133 C9 A1IB6 6 A1IB6 C10 C6 C 0 1 N N N N N N 9.462 48.288 -14.391 -5.141 2.245 -0.212 C10 A1IB6 7 A1IB6 C11 C7 C 0 1 Y N N N N N 9.835 47.124 -15.147 -5.733 3.546 -0.309 C11 A1IB6 8 A1IB6 C12 C8 C 0 1 Y N N N N N 8.887 46.181 -15.547 -7.121 3.699 -0.284 C12 A1IB6 9 A1IB6 C14 C9 C 0 1 Y N N N N N 10.469 44.909 -16.607 -6.931 5.986 -0.488 C14 A1IB6 10 A1IB6 C15 C10 C 0 1 Y N N N N N 11.479 45.782 -16.260 -5.549 5.920 -0.515 C15 A1IB6 11 A1IB6 C16 C11 C 0 1 Y N N N N N 11.156 46.905 -15.519 -4.928 4.688 -0.425 C16 A1IB6 12 A1IB6 C17 C12 C 0 1 Y N N N N N 7.540 50.715 -12.464 -2.736 -0.416 -0.047 C17 A1IB6 13 A1IB6 C20 C13 C 0 1 N N R N N N 5.095 52.452 -11.613 -0.875 -2.922 -1.334 C20 A1IB6 14 A1IB6 C22 C14 C 0 1 N N S N N N 4.311 52.516 -10.301 0.667 -3.003 -1.234 C22 A1IB6 15 A1IB6 C24 C15 C 0 1 N N R N N N 5.262 51.862 -9.297 1.017 -2.094 -0.039 C24 A1IB6 16 A1IB6 C25 C16 C 0 1 N N N N N N 4.966 50.430 -8.911 1.963 -0.980 -0.492 C25 A1IB6 17 A1IB6 C30 C17 C 0 1 Y N N N N N 2.753 47.878 -7.603 5.113 0.381 0.718 C30 A1IB6 18 A1IB6 C31 C18 C 0 1 Y N N N N N 2.165 47.609 -6.377 5.477 1.552 1.361 C31 A1IB6 19 A1IB6 C19 C19 C 0 1 N N R N N N 6.528 52.600 -11.112 -1.268 -2.447 0.089 C19 A1IB6 20 A1IB6 C27 C20 C 0 1 N N N N N N 4.135 50.664 -6.549 1.635 0.882 1.200 C27 A1IB6 21 A1IB6 C28 C21 C 0 1 N N N N N N 3.694 52.042 -6.179 0.748 0.384 2.342 C28 A1IB6 22 A1IB6 C32 C22 C 0 1 Y N N N N N 2.280 46.345 -5.829 6.464 2.362 0.832 C32 A1IB6 23 A1IB6 C33 C23 C 0 1 Y N N N N N 2.975 45.355 -6.497 7.097 2.005 -0.348 C33 A1IB6 24 A1IB6 C35 C24 C 0 1 N N N N N N 2.357 43.712 -4.863 8.385 3.992 -0.147 C35 A1IB6 25 A1IB6 C36 C25 C 0 1 Y N N N N N 3.574 45.631 -7.737 6.732 0.820 -1.002 C36 A1IB6 26 A1IB6 C37 C26 C 0 1 N N N N N N 4.319 44.606 -8.423 7.379 0.442 -2.222 C37 A1IB6 27 A1IB6 C39 C27 C 0 1 Y N N N N N 3.461 46.905 -8.293 5.733 0.011 -0.457 C39 A1IB6 28 A1IB6 C7 C28 C 0 1 Y N N N N N 9.492 51.679 -13.051 -4.773 -1.404 0.095 C7 A1IB6 29 A1IB6 N1 N2 N 0 1 N N N N N N 11.583 51.359 -14.164 -7.130 -0.851 0.106 N1 A1IB6 30 A1IB6 N13 N3 N 0 1 Y N N N N N 9.189 45.091 -16.264 -7.664 4.895 -0.373 N13 A1IB6 31 A1IB6 N18 N4 N 0 1 Y N N N N N 7.540 52.003 -11.965 -2.566 -1.767 0.065 N18 A1IB6 32 A1IB6 N26 N5 N 0 1 N N N N N N 3.851 50.342 -7.958 2.431 -0.232 0.678 N26 A1IB6 33 A1IB6 N38 N6 N 0 1 N N N N N N 4.899 43.804 -8.997 7.893 0.142 -3.190 N38 A1IB6 34 A1IB6 N5 N7 N 0 1 Y N N N N N 9.088 53.852 -12.004 -4.157 -3.668 0.275 N5 A1IB6 35 A1IB6 O21 O1 O 0 1 N N N N N N 4.743 53.556 -12.438 -1.436 -4.205 -1.616 O21 A1IB6 36 A1IB6 O23 O2 O 0 1 N N N N N N 4.026 53.847 -9.872 1.082 -4.346 -0.979 O23 A1IB6 37 A1IB6 O34 O3 O 0 1 N N N N N N 3.060 44.061 -6.065 8.066 2.800 -0.868 O34 A1IB6 38 A1IB6 O40 O4 O 0 1 N N N N N N 1.433 50.091 -7.673 4.151 -1.972 0.994 O40 A1IB6 39 A1IB6 O41 O5 O 0 1 N N N N N N 2.528 49.311 -9.751 3.735 -0.265 2.772 O41 A1IB6 40 A1IB6 O42 O6 O 0 1 N N N N N N 6.586 51.944 -9.864 -0.214 -1.526 0.440 O42 A1IB6 41 A1IB6 S29 S1 S 0 1 N N N N N N 2.535 49.463 -8.330 3.858 -0.645 1.409 S29 A1IB6 42 A1IB6 H4 H1 H 0 1 N N N N N N 10.654 55.150 -12.243 -5.700 -5.029 0.435 H4 A1IB6 43 A1IB6 H12 H2 H 0 1 N N N N N N 7.857 46.338 -15.264 -7.754 2.829 -0.191 H12 A1IB6 44 A1IB6 H14 H3 H 0 1 N N N N N N 10.725 44.034 -17.185 -7.418 6.948 -0.558 H14 A1IB6 45 A1IB6 H15 H4 H 0 1 N N N N N N 12.499 45.593 -16.560 -4.962 6.822 -0.606 H15 A1IB6 46 A1IB6 H16 H5 H 0 1 N N N N N N 11.925 47.607 -15.232 -3.851 4.608 -0.443 H16 A1IB6 47 A1IB6 H17 H6 H 0 1 N N N N N N 6.737 50.003 -12.345 -1.938 0.307 -0.133 H17 A1IB6 48 A1IB6 H20 H7 H 0 1 N N N N N N 4.948 51.484 -12.114 -1.179 -2.193 -2.085 H20 A1IB6 49 A1IB6 H22 H8 H 0 1 N N N N N N 3.391 51.919 -10.387 1.129 -2.629 -2.148 H22 A1IB6 50 A1IB6 H24 H9 H 0 1 N N N N N N 5.238 52.466 -8.378 1.487 -2.683 0.749 H24 A1IB6 51 A1IB6 H25A H10 H 0 0 N N N N N N 4.706 49.863 -9.817 2.817 -1.417 -1.009 H25A A1IB6 52 A1IB6 H25B H11 H 0 0 N N N N N N 5.864 49.992 -8.450 1.435 -0.307 -1.167 H25B A1IB6 53 A1IB6 H31 H12 H 0 1 N N N N N N 1.621 48.381 -5.854 4.987 1.834 2.281 H31 A1IB6 54 A1IB6 H19 H13 H 0 1 N N N N N N 6.743 53.671 -10.984 -1.290 -3.288 0.781 H19 A1IB6 55 A1IB6 H27B H14 H 0 0 N N N N N N 3.609 49.941 -5.909 1.010 1.287 0.404 H27B A1IB6 56 A1IB6 H27A H15 H 0 0 N N N N N N 5.219 50.583 -6.380 2.301 1.661 1.571 H27A A1IB6 57 A1IB6 H28C H16 H 0 0 N N N N N N 3.928 52.231 -5.121 0.079 1.184 2.658 H28C A1IB6 58 A1IB6 H28B H17 H 0 0 N N N N N N 4.219 52.776 -6.807 0.159 -0.468 2.000 H28B A1IB6 59 A1IB6 H28A H18 H 0 0 N N N N N N 2.609 52.134 -6.336 1.372 0.079 3.182 H28A A1IB6 60 A1IB6 H32 H19 H 0 1 N N N N N N 1.824 46.130 -4.874 6.742 3.274 1.339 H32 A1IB6 61 A1IB6 H35A H20 H 0 0 N N N N N N 2.516 42.647 -4.641 9.173 4.534 -0.670 H35A A1IB6 62 A1IB6 H35B H21 H 0 0 N N N N N N 2.734 44.321 -4.028 7.498 4.621 -0.075 H35B A1IB6 63 A1IB6 H35C H22 H 0 0 N N N N N N 1.282 43.901 -4.999 8.727 3.730 0.854 H35C A1IB6 64 A1IB6 H39 H23 H 0 1 N N N N N N 3.917 47.130 -9.246 5.446 -0.904 -0.955 H39 A1IB6 65 A1IB6 H1B H24 H 0 1 N N N N N N 12.424 51.862 -14.361 -8.057 -1.133 0.152 H1B A1IB6 66 A1IB6 H1A H25 H 0 1 N N N N N N 11.800 50.543 -13.629 -6.913 0.091 0.019 H1A A1IB6 67 A1IB6 H21 H26 H 0 1 N N N N N N 3.849 53.452 -12.743 -1.147 -4.584 -2.457 H21 A1IB6 68 A1IB6 H23 H27 H 0 1 N N N N N N 3.540 53.820 -9.056 0.836 -4.972 -1.673 H23 A1IB6 69 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IB6 N1 C2 SING N N 1 A1IB6 C2 N3 DOUB Y N 2 A1IB6 N3 C4 SING Y N 3 A1IB6 C4 N5 DOUB Y N 4 A1IB6 N5 C6 SING Y N 5 A1IB6 C6 C7 DOUB Y N 6 A1IB6 C7 C8 SING Y N 7 A1IB6 C8 C9 SING N N 8 A1IB6 C9 C10 TRIP N N 9 A1IB6 C10 C11 SING N N 10 A1IB6 C11 C12 DOUB Y N 11 A1IB6 C12 N13 SING Y N 12 A1IB6 N13 C14 DOUB Y N 13 A1IB6 C14 C15 SING Y N 14 A1IB6 C15 C16 DOUB Y N 15 A1IB6 C8 C17 DOUB Y N 16 A1IB6 C17 N18 SING Y N 17 A1IB6 N18 C19 SING N N 18 A1IB6 C19 C20 SING N N 19 A1IB6 C20 O21 SING N N 20 A1IB6 C20 C22 SING N N 21 A1IB6 C22 O23 SING N N 22 A1IB6 C22 C24 SING N N 23 A1IB6 C24 C25 SING N N 24 A1IB6 C25 N26 SING N N 25 A1IB6 N26 C27 SING N N 26 A1IB6 C27 C28 SING N N 27 A1IB6 N26 S29 SING N N 28 A1IB6 S29 C30 SING N N 29 A1IB6 C30 C31 DOUB Y N 30 A1IB6 C31 C32 SING Y N 31 A1IB6 C32 C33 DOUB Y N 32 A1IB6 C33 O34 SING N N 33 A1IB6 O34 C35 SING N N 34 A1IB6 C33 C36 SING Y N 35 A1IB6 C36 C37 SING N N 36 A1IB6 C37 N38 TRIP N N 37 A1IB6 C36 C39 DOUB Y N 38 A1IB6 S29 O40 DOUB N N 39 A1IB6 S29 O41 DOUB N N 40 A1IB6 C24 O42 SING N N 41 A1IB6 C7 C2 SING Y N 42 A1IB6 N18 C6 SING Y N 43 A1IB6 C16 C11 SING Y N 44 A1IB6 O42 C19 SING N N 45 A1IB6 C39 C30 SING Y N 46 A1IB6 C4 H4 SING N N 47 A1IB6 C12 H12 SING N N 48 A1IB6 C14 H14 SING N N 49 A1IB6 C15 H15 SING N N 50 A1IB6 C16 H16 SING N N 51 A1IB6 C17 H17 SING N N 52 A1IB6 C20 H20 SING N N 53 A1IB6 C22 H22 SING N N 54 A1IB6 C24 H24 SING N N 55 A1IB6 C25 H25A SING N N 56 A1IB6 C25 H25B SING N N 57 A1IB6 C31 H31 SING N N 58 A1IB6 C19 H19 SING N N 59 A1IB6 C27 H27B SING N N 60 A1IB6 C27 H27A SING N N 61 A1IB6 C28 H28C SING N N 62 A1IB6 C28 H28B SING N N 63 A1IB6 C28 H28A SING N N 64 A1IB6 C32 H32 SING N N 65 A1IB6 C35 H35A SING N N 66 A1IB6 C35 H35B SING N N 67 A1IB6 C35 H35C SING N N 68 A1IB6 C39 H39 SING N N 69 A1IB6 N1 H1B SING N N 70 A1IB6 N1 H1A SING N N 71 A1IB6 O21 H21 SING N N 72 A1IB6 O23 H23 SING N N 73 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1IB6 InChI InChI 1.06 "InChI=1S/C28H27N7O6S/c1-3-34(42(38,39)20-8-9-21(40-2)19(11-20)12-29)15-22-24(36)25(37)28(41-22)35-14-18(7-6-17-5-4-10-31-13-17)23-26(30)32-16-33-27(23)35/h4-5,8-11,13-14,16,22,24-25,28,36-37H,3,15H2,1-2H3,(H2,30,32,33)" A1IB6 InChIKey InChI 1.06 CNRYAFNRBRLDCL-UHFFFAOYSA-N A1IB6 SMILES_CANONICAL CACTVS 3.385 "CCN(C[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cc(C#Cc3cccnc3)c4c(N)ncnc24)[S](=O)(=O)c5ccc(OC)c(c5)C#N" A1IB6 SMILES CACTVS 3.385 "CCN(C[CH]1O[CH]([CH](O)[CH]1O)n2cc(C#Cc3cccnc3)c4c(N)ncnc24)[S](=O)(=O)c5ccc(OC)c(c5)C#N" A1IB6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCN(C[C@@H]1[C@H]([C@H]([C@@H](O1)n2cc(c3c2ncnc3N)C#Cc4cccnc4)O)O)S(=O)(=O)c5ccc(c(c5)C#N)OC" A1IB6 SMILES "OpenEye OEToolkits" 2.0.7 "CCN(CC1C(C(C(O1)n2cc(c3c2ncnc3N)C#Cc4cccnc4)O)O)S(=O)(=O)c5ccc(c(c5)C#N)OC" # _pdbx_chem_comp_identifier.comp_id A1IB6 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[[(2~{R},3~{S},4~{R},5~{R})-5-[4-azanyl-5-(2-pyridin-3-ylethynyl)pyrrolo[2,3-d]pyrimidin-7-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl]-3-cyano-~{N}-ethyl-4-methoxy-benzenesulfonamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1IB6 "Create component" 2024-05-20 PDBE A1IB6 "Initial release" 2024-08-28 RCSB #