data_A1IBK # _chem_comp.id A1IBK _chem_comp.name 2-azanyl-8-methyl-3,7-dihydropurine-6-thione _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C6 H7 N5 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-05-14 _chem_comp.pdbx_modified_date 2025-05-16 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 181.218 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1IBK _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9F8U _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1IBK C4 C1 C 0 1 N N N N N N -11.789 -17.090 12.898 -1.880 -1.176 -0.002 C4 A1IBK 1 A1IBK C5 C2 C 0 1 N N N N N N -11.006 -15.448 11.465 -0.877 0.915 0.002 C5 A1IBK 2 A1IBK C6 C3 C 0 1 Y N N N N N -9.659 -15.805 11.793 0.402 0.311 -0.001 C6 A1IBK 3 A1IBK N1 N1 N 0 1 Y N N N N N -8.129 -17.062 12.880 1.791 -1.389 0.002 N1 A1IBK 4 A1IBK N2 N2 N 0 1 N N N N N N -10.529 -17.546 13.170 -0.678 -1.812 0.001 N2 A1IBK 5 A1IBK C3 C4 C 0 1 Y N N N N N -9.459 -16.868 12.664 0.491 -1.075 0.001 C3 A1IBK 6 A1IBK N3 N3 N 0 1 N N N N N N -12.805 -17.709 13.458 -3.029 -1.922 -0.002 N3 A1IBK 7 A1IBK C1 C5 C 0 1 N N N N N N -6.040 -15.975 12.098 4.015 -0.249 0.002 C1 A1IBK 8 A1IBK C2 C6 C 0 1 Y N N N N N -7.509 -16.138 12.166 2.509 -0.297 0.001 C2 A1IBK 9 A1IBK N4 N4 N 0 1 N N N N N N -12.015 -16.023 12.103 -1.972 0.137 0.002 N4 A1IBK 10 A1IBK S1 S1 S 0 1 N N N N N N -11.420 -14.311 10.315 -1.028 2.620 0.001 S1 A1IBK 11 A1IBK N5 N5 N 0 1 Y N N N N N -8.399 -15.368 11.485 1.697 0.781 -0.007 N5 A1IBK 12 A1IBK H4 H2 H 0 1 N N N N N N -10.394 -18.363 13.731 -0.641 -2.782 0.002 H4 A1IBK 13 A1IBK H6 H3 H 0 1 N N N N N N -13.738 -17.389 13.294 -3.893 -1.482 0.001 H6 A1IBK 14 A1IBK H5 H4 H 0 1 N N N N N N -12.645 -18.500 14.048 -2.977 -2.891 -0.004 H5 A1IBK 15 A1IBK H3 H5 H 0 1 N N N N N N -5.557 -16.736 12.728 4.379 -0.239 -1.026 H3 A1IBK 16 A1IBK H1 H6 H 0 1 N N N N N N -5.706 -16.095 11.057 4.350 0.653 0.514 H1 A1IBK 17 A1IBK H2 H7 H 0 1 N N N N N N -5.765 -14.972 12.458 4.407 -1.126 0.517 H2 A1IBK 18 A1IBK H7 H8 H 0 1 N N N N N N -8.173 -14.615 10.868 1.973 1.711 -0.009 H7 A1IBK 19 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IBK C1 C2 SING N N 1 A1IBK C2 N1 DOUB Y N 2 A1IBK N1 C3 SING Y N 3 A1IBK C3 N2 SING N N 4 A1IBK N2 C4 SING N N 5 A1IBK C4 N3 SING N N 6 A1IBK C4 N4 DOUB N N 7 A1IBK N4 C5 SING N N 8 A1IBK C5 S1 DOUB N N 9 A1IBK C5 C6 SING N N 10 A1IBK C6 N5 SING Y N 11 A1IBK C2 N5 SING Y N 12 A1IBK C3 C6 DOUB Y N 13 A1IBK N2 H4 SING N N 14 A1IBK N3 H6 SING N N 15 A1IBK N3 H5 SING N N 16 A1IBK C1 H3 SING N N 17 A1IBK C1 H1 SING N N 18 A1IBK C1 H2 SING N N 19 A1IBK N5 H7 SING N N 20 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1IBK InChI InChI 1.06 "InChI=1S/C6H7N5S/c1-2-8-3-4(9-2)10-6(7)11-5(3)12/h1H3,(H4,7,8,9,10,11,12)" A1IBK InChIKey InChI 1.06 VFPBXHBKDUKYRE-UHFFFAOYSA-N A1IBK SMILES_CANONICAL CACTVS 3.385 "Cc1[nH]c2C(=S)N=C(N)Nc2n1" A1IBK SMILES CACTVS 3.385 "Cc1[nH]c2C(=S)N=C(N)Nc2n1" A1IBK SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1[nH]c2c(n1)NC(=NC2=S)N" A1IBK SMILES "OpenEye OEToolkits" 2.0.7 "Cc1[nH]c2c(n1)NC(=NC2=S)N" # _pdbx_chem_comp_identifier.comp_id A1IBK _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier 2-azanyl-8-methyl-3,7-dihydropurine-6-thione # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1IBK "Create component" 2024-05-14 PDBE A1IBK "Initial release" 2025-05-21 RCSB #