data_A1ICN # _chem_comp.id A1ICN _chem_comp.name "2-[(2~{S})-5-chloranyl-2-phenyl-2-[(2~{S})-pyrrolidin-2-yl]-3~{H}-1-benzofuran-4-yl]-3-fluoranyl-4-methoxy-benzamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H24 Cl F N2 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-06-03 _chem_comp.pdbx_modified_date 2026-03-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 466.932 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1ICN _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9FJ5 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1ICN C1 C1 C 0 1 Y N N N N N 4.750 46.988 -9.199 -1.652 -0.526 2.233 C1 A1ICN 1 A1ICN C2 C2 C 0 1 Y N N N N N 5.960 47.687 -9.106 -0.757 -0.826 3.241 C2 A1ICN 2 A1ICN C3 C3 C 0 1 Y N N N N N 5.980 48.995 -8.620 0.602 -0.702 3.030 C3 A1ICN 3 A1ICN C11 C4 C 0 1 N N S N N N 2.798 52.384 -8.141 2.674 -1.462 -0.590 C11 A1ICN 4 A1ICN C12 C5 C 0 1 Y N N N N N 3.046 51.139 -5.966 3.472 0.907 -0.536 C12 A1ICN 5 A1ICN C13 C6 C 0 1 Y N N N N N 1.689 46.744 -10.500 -2.622 1.539 -0.236 C13 A1ICN 6 A1ICN C14 C7 C 0 1 Y N N N N N 0.414 46.173 -10.661 -3.516 1.835 -1.266 C14 A1ICN 7 A1ICN C15 C8 C 0 1 Y N N N N N -0.404 45.890 -9.568 -3.906 0.850 -2.146 C15 A1ICN 8 A1ICN C16 C9 C 0 1 Y N N N N N 0.068 46.164 -8.277 -3.415 -0.444 -2.015 C16 A1ICN 9 A1ICN C17 C10 C 0 1 Y N N N N N 1.354 46.686 -8.105 -2.524 -0.756 -0.996 C17 A1ICN 10 A1ICN C18 C11 C 0 1 N N N N N N 2.519 47.010 -11.753 -2.204 2.592 0.707 C18 A1ICN 11 A1ICN C19 C12 C 0 1 Y N N N N N 4.077 50.827 -5.079 3.795 2.022 0.215 C19 A1ICN 12 A1ICN C20 C13 C 0 1 Y N N N N N 3.881 50.922 -3.696 4.762 2.901 -0.234 C20 A1ICN 13 A1ICN C21 C14 C 0 1 Y N N N N N 2.666 51.362 -3.169 5.407 2.666 -1.434 C21 A1ICN 14 A1ICN C22 C15 C 0 1 Y N N N N N 1.616 51.678 -4.046 5.084 1.551 -2.185 C22 A1ICN 15 A1ICN C23 C16 C 0 1 Y N N N N N 1.815 51.561 -5.429 4.116 0.672 -1.737 C23 A1ICN 16 A1ICN C29 C17 C 0 1 N N N N N N -2.038 45.460 -7.153 -4.725 -1.020 -3.912 C29 A1ICN 17 A1ICN C4 C18 C 0 1 Y N N N N N 4.749 49.598 -8.352 1.091 -0.272 1.798 C4 A1ICN 18 A1ICN C5 C19 C 0 1 Y N N N N N 3.551 48.930 -8.529 0.192 0.023 0.784 C5 A1ICN 19 A1ICN C6 C20 C 0 1 Y N N N N N 3.510 47.607 -8.967 -1.176 -0.097 0.992 C6 A1ICN 20 A1ICN C7 C21 C 0 1 Y N N N N N 2.187 46.955 -9.198 -2.126 0.229 -0.097 C7 A1ICN 21 A1ICN O8 O1 O 0 1 N N N N N N 4.648 50.896 -7.893 2.375 -0.067 1.393 O8 A1ICN 22 A1ICN C9 C22 C 0 1 N N S N N N 3.244 51.052 -7.494 2.422 -0.055 -0.044 C9 A1ICN 23 A1ICN C10 C23 C 0 1 N N N N N N 2.430 49.853 -8.089 1.005 0.436 -0.427 C10 A1ICN 24 A1ICN O24 O2 O 0 1 N N N N N N 3.136 48.061 -11.875 -1.425 2.331 1.604 O24 A1ICN 25 A1ICN N25 N1 N 0 1 N N N N N N 2.563 46.056 -12.713 -2.685 3.844 0.575 N25 A1ICN 26 A1ICN O26 O3 O 0 1 N N N N N N -0.664 45.877 -7.116 -3.807 -1.408 -2.888 O26 A1ICN 27 A1ICN F27 F1 F 0 1 N N N N N N 1.788 46.896 -6.858 -2.050 -2.015 -0.874 F27 A1ICN 28 A1ICN CL28 CL1 CL 0 0 N N N N N N 4.784 45.340 -9.756 -3.359 -0.686 2.506 CL28 A1ICN 29 A1ICN N30 N2 N 0 1 N N N N N N 3.531 53.583 -7.675 3.967 -1.995 -0.088 N30 A1ICN 30 A1ICN C31 C24 C 0 1 N N N N N N 3.604 54.531 -8.819 3.864 -3.466 -0.193 C31 A1ICN 31 A1ICN C32 C25 C 0 1 N N N N N N 2.909 53.852 -10.040 2.367 -3.820 -0.135 C32 A1ICN 32 A1ICN C33 C26 C 0 1 N N N N N N 2.978 52.357 -9.677 1.635 -2.463 -0.024 C33 A1ICN 33 A1ICN H1 H1 H 0 1 N N N N N N 6.881 47.212 -9.411 -1.122 -1.160 4.201 H1 A1ICN 34 A1ICN H2 H2 H 0 1 N N N N N N 6.910 49.520 -8.458 1.292 -0.941 3.826 H2 A1ICN 35 A1ICN H3 H3 H 0 1 N N N N N N 1.727 52.521 -7.929 2.655 -1.462 -1.680 H3 A1ICN 36 A1ICN H4 H4 H 0 1 N N N N N N 0.060 45.948 -11.656 -3.902 2.838 -1.374 H4 A1ICN 37 A1ICN H5 H5 H 0 1 N N N N N N -1.387 45.466 -9.714 -4.598 1.083 -2.941 H5 A1ICN 38 A1ICN H6 H6 H 0 1 N N N N N N 5.035 50.509 -5.463 3.292 2.205 1.153 H6 A1ICN 39 A1ICN H7 H7 H 0 1 N N N N N N 4.683 50.650 -3.026 5.014 3.772 0.352 H7 A1ICN 40 A1ICN H8 H8 H 0 1 N N N N N N 2.535 51.458 -2.101 6.162 3.353 -1.785 H8 A1ICN 41 A1ICN H9 H9 H 0 1 N N N N N N 0.663 52.008 -3.659 5.587 1.368 -3.123 H9 A1ICN 42 A1ICN H10 H10 H 0 1 N N N N N N 1.003 51.801 -6.100 3.863 -0.199 -2.324 H10 A1ICN 43 A1ICN H11 H11 H 0 1 N N N N N N -2.399 45.294 -6.127 -5.642 -0.647 -3.457 H11 A1ICN 44 A1ICN H12 H12 H 0 1 N N N N N N -2.645 46.241 -7.633 -4.277 -0.236 -4.523 H12 A1ICN 45 A1ICN H13 H13 H 0 1 N N N N N N -2.122 44.526 -7.727 -4.955 -1.882 -4.539 H13 A1ICN 46 A1ICN H14 H14 H 0 1 N N N N N N 1.810 50.169 -8.941 0.649 -0.068 -1.326 H14 A1ICN 47 A1ICN H15 H15 H 0 1 N N N N N N 1.793 49.380 -7.327 0.990 1.518 -0.556 H15 A1ICN 48 A1ICN H16 H16 H 0 1 N N N N N N 3.106 46.203 -13.540 -3.306 4.052 -0.140 H16 A1ICN 49 A1ICN H17 H17 H 0 1 N N N N N N 2.052 45.204 -12.595 -2.409 4.537 1.195 H17 A1ICN 50 A1ICN H18 H18 H 0 1 N N N N N N 3.044 54.006 -6.911 4.739 -1.646 -0.636 H18 A1ICN 51 A1ICN H20 H20 H 0 1 N N N N N N 3.085 55.467 -8.564 4.289 -3.802 -1.139 H20 A1ICN 52 A1ICN H21 H21 H 0 1 N N N N N N 4.655 54.749 -9.059 4.389 -3.935 0.640 H21 A1ICN 53 A1ICN H22 H22 H 0 1 N N N N N N 1.867 54.188 -10.141 2.065 -4.339 -1.045 H22 A1ICN 54 A1ICN H23 H23 H 0 1 N N N N N N 3.454 54.060 -10.973 2.157 -4.436 0.739 H23 A1ICN 55 A1ICN H24 H24 H 0 1 N N N N N N 3.949 51.923 -9.957 1.404 -2.233 1.016 H24 A1ICN 56 A1ICN H25 H25 H 0 1 N N N N N N 2.170 51.791 -10.163 0.729 -2.462 -0.631 H25 A1ICN 57 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1ICN C1 C2 DOUB Y N 1 A1ICN C1 C6 SING Y N 2 A1ICN C1 CL28 SING N N 3 A1ICN C2 C3 SING Y N 4 A1ICN C3 C4 DOUB Y N 5 A1ICN C4 C5 SING Y N 6 A1ICN C4 O8 SING N N 7 A1ICN C5 C6 DOUB Y N 8 A1ICN C5 C10 SING N N 9 A1ICN C6 C7 SING N N 10 A1ICN C7 C13 DOUB Y N 11 A1ICN C7 C17 SING Y N 12 A1ICN O8 C9 SING N N 13 A1ICN C9 C10 SING N N 14 A1ICN C9 C11 SING N N 15 A1ICN C9 C12 SING N N 16 A1ICN C11 N30 SING N N 17 A1ICN C11 C33 SING N N 18 A1ICN C12 C19 DOUB Y N 19 A1ICN C12 C23 SING Y N 20 A1ICN C13 C14 SING Y N 21 A1ICN C13 C18 SING N N 22 A1ICN C14 C15 DOUB Y N 23 A1ICN C15 C16 SING Y N 24 A1ICN C16 C17 DOUB Y N 25 A1ICN C16 O26 SING N N 26 A1ICN C17 F27 SING N N 27 A1ICN C18 O24 DOUB N N 28 A1ICN C18 N25 SING N N 29 A1ICN C19 C20 SING Y N 30 A1ICN C20 C21 DOUB Y N 31 A1ICN C21 C22 SING Y N 32 A1ICN C22 C23 DOUB Y N 33 A1ICN O26 C29 SING N N 34 A1ICN N30 C31 SING N N 35 A1ICN C31 C32 SING N N 36 A1ICN C32 C33 SING N N 37 A1ICN C2 H1 SING N N 38 A1ICN C3 H2 SING N N 39 A1ICN C11 H3 SING N N 40 A1ICN C14 H4 SING N N 41 A1ICN C15 H5 SING N N 42 A1ICN C19 H6 SING N N 43 A1ICN C20 H7 SING N N 44 A1ICN C21 H8 SING N N 45 A1ICN C22 H9 SING N N 46 A1ICN C23 H10 SING N N 47 A1ICN C29 H11 SING N N 48 A1ICN C29 H12 SING N N 49 A1ICN C29 H13 SING N N 50 A1ICN C10 H14 SING N N 51 A1ICN C10 H15 SING N N 52 A1ICN N25 H16 SING N N 53 A1ICN N25 H17 SING N N 54 A1ICN N30 H18 SING N N 55 A1ICN C31 H20 SING N N 56 A1ICN C31 H21 SING N N 57 A1ICN C32 H22 SING N N 58 A1ICN C32 H23 SING N N 59 A1ICN C33 H24 SING N N 60 A1ICN C33 H25 SING N N 61 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1ICN InChI InChI 1.06 "InChI=1S/C26H24ClFN2O3/c1-32-20-11-9-16(25(29)31)23(24(20)28)22-17-14-26(21-8-5-13-30-21,15-6-3-2-4-7-15)33-19(17)12-10-18(22)27/h2-4,6-7,9-12,21,30H,5,8,13-14H2,1H3,(H2,29,31)/t21-,26-/m0/s1" A1ICN InChIKey InChI 1.06 ICQIMDKJYGSHPF-LVXARBLLSA-N A1ICN SMILES_CANONICAL CACTVS 3.385 "COc1ccc(C(N)=O)c(c1F)c2c(Cl)ccc3O[C@](Cc23)([C@@H]4CCCN4)c5ccccc5" A1ICN SMILES CACTVS 3.385 "COc1ccc(C(N)=O)c(c1F)c2c(Cl)ccc3O[C](Cc23)([CH]4CCCN4)c5ccccc5" A1ICN SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1ccc(c(c1F)c2c(ccc3c2C[C@](O3)(c4ccccc4)[C@@H]5CCCN5)Cl)C(=O)N" A1ICN SMILES "OpenEye OEToolkits" 2.0.7 "COc1ccc(c(c1F)c2c(ccc3c2CC(O3)(c4ccccc4)C5CCCN5)Cl)C(=O)N" # _pdbx_chem_comp_identifier.comp_id A1ICN _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-[(2~{S})-5-chloranyl-2-phenyl-2-[(2~{S})-pyrrolidin-2-yl]-3~{H}-1-benzofuran-4-yl]-3-fluoranyl-4-methoxy-benzamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1ICN "Create component" 2024-06-03 PDBE A1ICN "Initial release" 2026-03-11 RCSB #