data_A1ID9 # _chem_comp.id A1ID9 _chem_comp.name "(1~{R})-2-[4-[[4-bromanyl-3,5-bis(fluoranyl)phenyl]methylamino]cyclohexyl]-1-(6-methoxy-1,5-naphthyridin-4-yl)ethanol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H26 Br F2 N3 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-06-13 _chem_comp.pdbx_modified_date 2024-08-02 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 506.383 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1ID9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9FOY _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1ID9 C10 C1 C 0 1 N N N N N N -15.530 -29.542 -25.227 3.862 1.396 0.421 C10 A1ID9 1 A1ID9 C11 C2 C 0 1 N N N N N N -15.758 -29.445 -26.737 2.376 1.378 0.056 C11 A1ID9 2 A1ID9 C12 C3 C 0 1 N N N N N N -16.770 -30.492 -27.207 1.539 1.630 1.312 C12 A1ID9 3 A1ID9 C1 C4 C 0 1 N N N N N N -15.982 -26.267 -23.946 4.385 -3.297 -0.215 C1 A1ID9 4 A1ID9 O1 O1 O 0 1 N N N N N N -16.496 -26.522 -22.630 5.757 -3.471 0.143 O1 A1ID9 5 A1ID9 C2 C5 C 0 1 Y N N N N N -16.232 -27.746 -22.114 6.535 -2.361 0.157 C2 A1ID9 6 A1ID9 C3 C6 C 0 1 Y N N N N N -16.227 -27.823 -20.695 7.888 -2.477 0.501 C3 A1ID9 7 A1ID9 C4 C7 C 0 1 Y N N N N N -15.965 -29.026 -20.126 8.682 -1.370 0.519 C4 A1ID9 8 A1ID9 C5 C8 C 0 1 Y N N N N N -15.710 -30.139 -20.948 8.106 -0.126 0.186 C5 A1ID9 9 A1ID9 N1 N1 N 0 1 Y N N N N N -15.444 -31.352 -20.380 8.834 0.993 0.187 N1 A1ID9 10 A1ID9 C6 C9 C 0 1 Y N N N N N -15.213 -32.367 -21.192 8.303 2.151 -0.122 C6 A1ID9 11 A1ID9 C7 C10 C 0 1 Y N N N N N -15.218 -32.285 -22.592 6.958 2.270 -0.465 C7 A1ID9 12 A1ID9 C8 C11 C 0 1 Y N N N N N -15.479 -31.082 -23.200 6.159 1.163 -0.484 C8 A1ID9 13 A1ID9 C9 C12 C 0 1 N N R N N N -15.489 -30.975 -24.714 4.701 1.269 -0.852 C9 A1ID9 14 A1ID9 O2 O2 O 0 1 N N N N N N -14.353 -31.661 -25.234 4.499 2.421 -1.673 O2 A1ID9 15 A1ID9 C13 C13 C 0 1 N N N N N N -16.968 -30.468 -28.705 0.054 1.612 0.947 C13 A1ID9 16 A1ID9 C14 C14 C 0 1 N N N N N N -15.649 -30.669 -29.416 -0.310 0.248 0.358 C14 A1ID9 17 A1ID9 N2 N2 N 0 1 N N N N N N -15.852 -30.778 -30.872 -1.737 0.230 0.008 N2 A1ID9 18 A1ID9 C15 C15 C 0 1 N N N N N N -15.597 -29.531 -31.616 -2.560 -0.124 1.171 C15 A1ID9 19 A1ID9 C16 C16 C 0 1 Y N N N N N -15.735 -29.704 -33.116 -4.014 -0.132 0.775 C16 A1ID9 20 A1ID9 C17 C17 C 0 1 Y N N N N N -16.594 -28.878 -33.831 -4.594 -1.294 0.301 C17 A1ID9 21 A1ID9 C18 C18 C 0 1 Y N N N N N -16.717 -29.040 -35.187 -5.930 -1.303 -0.063 C18 A1ID9 22 A1ID9 F1 F1 F 0 1 N N N N N N -17.546 -28.238 -35.878 -6.496 -2.439 -0.525 F1 A1ID9 23 A1ID9 C19 C19 C 0 1 Y N N N N N -16.001 -30.002 -35.874 -6.684 -0.147 0.046 C19 A1ID9 24 A1ID9 BR1 BR1 BR 0 0 N N N N N N -16.182 -30.199 -37.729 -8.509 -0.157 -0.451 BR1 A1ID9 25 A1ID9 C20 C20 C 0 1 Y N N N N N -15.150 -30.812 -35.148 -6.102 1.017 0.521 C20 A1ID9 26 A1ID9 F2 F2 F 0 1 N N N N N N -14.448 -31.754 -35.802 -6.837 2.145 0.628 F2 A1ID9 27 A1ID9 C21 C21 C 0 1 Y N N N N N -15.009 -30.681 -33.789 -4.767 1.021 0.889 C21 A1ID9 28 A1ID9 C22 C22 C 0 1 N N N N N N -14.693 -29.560 -29.031 0.526 -0.005 -0.898 C22 A1ID9 29 A1ID9 C23 C23 C 0 1 N N N N N N -14.457 -29.562 -27.538 2.012 0.014 -0.533 C23 A1ID9 30 A1ID9 C24 C24 C 0 1 Y N N N N N -15.734 -29.974 -22.354 6.732 -0.079 -0.152 C24 A1ID9 31 A1ID9 N3 N3 N 0 1 Y N N N N N -16.003 -28.751 -22.915 6.003 -1.199 -0.158 N3 A1ID9 32 A1ID9 H1 H1 H 0 1 N N N N N N -14.572 -29.058 -24.987 4.101 2.335 0.921 H1 A1ID9 33 A1ID9 H2 H2 H 0 1 N N N N N N -16.347 -29.012 -24.716 4.083 0.562 1.087 H2 A1ID9 34 A1ID9 H3 H3 H 0 1 N N N N N N -16.186 -28.453 -26.944 2.172 2.157 -0.679 H3 A1ID9 35 A1ID9 H4 H4 H 0 1 N N N N N N -17.736 -30.294 -26.720 1.743 0.851 2.047 H4 A1ID9 36 A1ID9 H5 H5 H 0 1 N N N N N N -16.409 -31.489 -26.914 1.798 2.602 1.732 H5 A1ID9 37 A1ID9 H6 H6 H 0 1 N N N N N N -16.258 -25.248 -24.257 3.909 -2.615 0.490 H6 A1ID9 38 A1ID9 H7 H7 H 0 1 N N N N N N -14.886 -26.364 -23.937 4.321 -2.883 -1.221 H7 A1ID9 39 A1ID9 H8 H8 H 0 1 N N N N N N -16.408 -26.994 -24.653 3.877 -4.262 -0.186 H8 A1ID9 40 A1ID9 H9 H9 H 0 1 N N N N N N -16.425 -26.951 -20.089 8.301 -3.443 0.751 H9 A1ID9 41 A1ID9 H10 H10 H 0 1 N N N N N N -15.952 -29.129 -19.051 9.727 -1.443 0.782 H10 A1ID9 42 A1ID9 H11 H11 H 0 1 N N N N N N -15.005 -33.329 -20.747 8.924 3.035 -0.110 H11 A1ID9 43 A1ID9 H12 H12 H 0 1 N N N N N N -15.018 -33.163 -23.188 6.547 3.238 -0.714 H12 A1ID9 44 A1ID9 H13 H13 H 0 1 N N N N N N -16.398 -31.479 -25.074 4.399 0.375 -1.399 H13 A1ID9 45 A1ID9 H14 H14 H 0 1 N N N N N N -14.342 -32.552 -24.905 4.747 3.254 -1.250 H14 A1ID9 46 A1ID9 H15 H15 H 0 1 N N N N N N -17.393 -29.497 -28.999 -0.543 1.792 1.842 H15 A1ID9 47 A1ID9 H16 H16 H 0 1 N N N N N N -17.660 -31.273 -28.992 -0.150 2.391 0.213 H16 A1ID9 48 A1ID9 H17 H17 H 0 1 N N N N N N -15.220 -31.617 -29.059 -0.107 -0.531 1.092 H17 A1ID9 49 A1ID9 H18 H18 H 0 1 N N N N N N -16.799 -31.052 -31.036 -1.912 -0.397 -0.763 H18 A1ID9 50 A1ID9 H20 H20 H 0 1 N N N N N N -14.574 -29.192 -31.394 -2.276 -1.113 1.530 H20 A1ID9 51 A1ID9 H21 H21 H 0 1 N N N N N N -16.317 -28.769 -31.282 -2.404 0.609 1.963 H21 A1ID9 52 A1ID9 H22 H22 H 0 1 N N N N N N -17.161 -28.113 -33.322 -4.005 -2.195 0.216 H22 A1ID9 53 A1ID9 H23 H23 H 0 1 N N N N N N -14.339 -31.332 -33.246 -4.313 1.928 1.260 H23 A1ID9 54 A1ID9 H24 H24 H 0 1 N N N N N N -13.735 -29.711 -29.550 0.268 -0.977 -1.318 H24 A1ID9 55 A1ID9 H25 H25 H 0 1 N N N N N N -15.122 -28.592 -29.329 0.323 0.774 -1.633 H25 A1ID9 56 A1ID9 H26 H26 H 0 1 N N N N N N -13.956 -30.501 -27.262 2.608 -0.166 -1.428 H26 A1ID9 57 A1ID9 H27 H27 H 0 1 N N N N N N -13.808 -28.711 -27.283 2.216 -0.765 0.201 H27 A1ID9 58 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1ID9 BR1 C19 SING N N 1 A1ID9 F1 C18 SING N N 2 A1ID9 C19 C18 DOUB Y N 3 A1ID9 C19 C20 SING Y N 4 A1ID9 F2 C20 SING N N 5 A1ID9 C18 C17 SING Y N 6 A1ID9 C20 C21 DOUB Y N 7 A1ID9 C17 C16 DOUB Y N 8 A1ID9 C21 C16 SING Y N 9 A1ID9 C16 C15 SING N N 10 A1ID9 C15 N2 SING N N 11 A1ID9 N2 C14 SING N N 12 A1ID9 C14 C22 SING N N 13 A1ID9 C14 C13 SING N N 14 A1ID9 C22 C23 SING N N 15 A1ID9 C13 C12 SING N N 16 A1ID9 C23 C11 SING N N 17 A1ID9 C12 C11 SING N N 18 A1ID9 C11 C10 SING N N 19 A1ID9 O2 C9 SING N N 20 A1ID9 C10 C9 SING N N 21 A1ID9 C9 C8 SING N N 22 A1ID9 C1 O1 SING N N 23 A1ID9 C8 C7 DOUB Y N 24 A1ID9 C8 C24 SING Y N 25 A1ID9 N3 C24 DOUB Y N 26 A1ID9 N3 C2 SING Y N 27 A1ID9 O1 C2 SING N N 28 A1ID9 C7 C6 SING Y N 29 A1ID9 C24 C5 SING Y N 30 A1ID9 C2 C3 DOUB Y N 31 A1ID9 C6 N1 DOUB Y N 32 A1ID9 C5 N1 SING Y N 33 A1ID9 C5 C4 DOUB Y N 34 A1ID9 C3 C4 SING Y N 35 A1ID9 C10 H1 SING N N 36 A1ID9 C10 H2 SING N N 37 A1ID9 C11 H3 SING N N 38 A1ID9 C12 H4 SING N N 39 A1ID9 C12 H5 SING N N 40 A1ID9 C1 H6 SING N N 41 A1ID9 C1 H7 SING N N 42 A1ID9 C1 H8 SING N N 43 A1ID9 C3 H9 SING N N 44 A1ID9 C4 H10 SING N N 45 A1ID9 C6 H11 SING N N 46 A1ID9 C7 H12 SING N N 47 A1ID9 C9 H13 SING N N 48 A1ID9 O2 H14 SING N N 49 A1ID9 C13 H15 SING N N 50 A1ID9 C13 H16 SING N N 51 A1ID9 C14 H17 SING N N 52 A1ID9 N2 H18 SING N N 53 A1ID9 C15 H20 SING N N 54 A1ID9 C15 H21 SING N N 55 A1ID9 C17 H22 SING N N 56 A1ID9 C21 H23 SING N N 57 A1ID9 C22 H24 SING N N 58 A1ID9 C22 H25 SING N N 59 A1ID9 C23 H26 SING N N 60 A1ID9 C23 H27 SING N N 61 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1ID9 InChI InChI 1.06 "InChI=1S/C24H26BrF2N3O2/c1-32-22-7-6-20-24(30-22)17(8-9-28-20)21(31)12-14-2-4-16(5-3-14)29-13-15-10-18(26)23(25)19(27)11-15/h6-11,14,16,21,29,31H,2-5,12-13H2,1H3/t14-,16-,21-/m1/s1" A1ID9 InChIKey InChI 1.06 RCLQISQKEHCDJQ-IUSZMWJPSA-N A1ID9 SMILES_CANONICAL CACTVS 3.385 "COc1ccc2nccc([C@H](O)C[C@@H]3CC[C@H](CC3)NCc4cc(F)c(Br)c(F)c4)c2n1" A1ID9 SMILES CACTVS 3.385 "COc1ccc2nccc([CH](O)C[CH]3CC[CH](CC3)NCc4cc(F)c(Br)c(F)c4)c2n1" A1ID9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1ccc2c(n1)c(ccn2)[C@@H](CC3CCC(CC3)NCc4cc(c(c(c4)F)Br)F)O" A1ID9 SMILES "OpenEye OEToolkits" 2.0.7 "COc1ccc2c(n1)c(ccn2)C(CC3CCC(CC3)NCc4cc(c(c(c4)F)Br)F)O" # _pdbx_chem_comp_identifier.comp_id A1ID9 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(1~{R})-2-[4-[[4-bromanyl-3,5-bis(fluoranyl)phenyl]methylamino]cyclohexyl]-1-(6-methoxy-1,5-naphthyridin-4-yl)ethanol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1ID9 "Create component" 2024-06-13 PDBE A1ID9 "Initial release" 2024-08-07 RCSB #