data_A1IE5 # _chem_comp.id A1IE5 _chem_comp.name "2-cyclopropyl-6-methyl-~{N}-[3-[(6~{S})-6-methyl-2-oxidanylidene-1,3-oxazinan-6-yl]phenyl]pyrimidine-4-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H22 N4 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-06-18 _chem_comp.pdbx_modified_date 2024-07-26 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 366.414 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1IE5 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9FQJ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1IE5 C1 C1 C 0 1 Y N N N N N 18.858 22.909 13.680 5.500 0.738 0.957 C1 A1IE5 1 A1IE5 C2 C2 C 0 1 Y N N N N N 19.543 22.235 12.683 4.276 1.375 0.812 C2 A1IE5 2 A1IE5 C3 C3 C 0 1 Y N N N N N 18.959 21.100 12.159 3.222 0.658 0.243 C3 A1IE5 3 A1IE5 C7 C4 C 0 1 N N N N N N 15.598 19.321 13.896 4.571 -2.908 -1.902 C7 A1IE5 4 A1IE5 C8 C5 C 0 1 N N N N N N 19.646 20.307 11.080 1.891 1.289 0.063 C8 A1IE5 5 A1IE5 C9 C6 C 0 1 Y N N N N N 19.295 18.172 9.831 -0.397 1.147 -0.570 C9 A1IE5 6 A1IE5 C10 C7 C 0 1 Y N N N N N 18.271 17.561 9.119 -0.547 2.508 -0.798 C10 A1IE5 7 A1IE5 C11 C8 C 0 1 Y N N N N N 18.555 16.475 8.309 -1.811 3.058 -0.878 C11 A1IE5 8 A1IE5 C12 C9 C 0 1 Y N N N N N 19.853 16.012 8.199 -2.927 2.255 -0.731 C12 A1IE5 9 A1IE5 C13 C10 C 0 1 Y N N N N N 20.887 16.614 8.906 -2.781 0.899 -0.504 C13 A1IE5 10 A1IE5 C14 C11 C 0 1 Y N N N N N 20.603 17.702 9.728 -1.520 0.341 -0.429 C14 A1IE5 11 A1IE5 C15 C12 C 0 1 N N S N N N 22.312 16.077 8.781 -4.000 0.027 -0.344 C15 A1IE5 12 A1IE5 C16 C13 C 0 1 N N N N N N 22.305 14.553 8.954 -5.147 0.846 0.262 C16 A1IE5 13 A1IE5 C19 C14 C 0 1 N N N N N N 22.938 16.489 7.454 -4.423 -0.525 -1.707 C19 A1IE5 14 A1IE5 O1 O1 O 0 1 N N N N N N 23.820 16.800 11.915 -4.529 -2.863 1.531 O1 A1IE5 15 A1IE5 C18 C15 C 0 1 N N N N N N 23.218 16.164 11.084 -4.743 -1.773 1.037 C18 A1IE5 16 A1IE5 N3 N1 N 0 1 N N N N N N 22.608 14.999 11.329 -6.003 -1.330 0.993 N3 A1IE5 17 A1IE5 C17 C16 C 0 1 N N N N N N 21.876 14.180 10.360 -6.377 -0.058 0.379 C17 A1IE5 18 A1IE5 O2 O2 O 0 1 N N N N N N 23.151 16.675 9.825 -3.702 -1.072 0.561 O2 A1IE5 19 A1IE5 N2 N2 N 0 1 N N N N N N 18.910 19.265 10.636 0.882 0.587 -0.489 N2 A1IE5 20 A1IE5 O O3 O 0 1 N N N N N N 20.767 20.606 10.671 1.711 2.438 0.413 O A1IE5 21 A1IE5 N N3 N 0 1 Y N N N N N 17.771 20.649 12.584 3.432 -0.600 -0.137 N A1IE5 22 A1IE5 C4 C17 C 0 1 Y N N N N N 17.174 21.352 13.550 4.611 -1.163 0.020 C4 A1IE5 23 A1IE5 C5 C18 C 0 1 N N N N N N 15.846 20.805 13.999 4.805 -2.590 -0.424 C5 A1IE5 24 A1IE5 C6 C19 C 0 1 N N N N N N 14.894 20.246 12.972 3.562 -3.373 -0.850 C6 A1IE5 25 A1IE5 N1 N4 N 0 1 Y N N N N N 17.661 22.472 14.125 5.627 -0.514 0.555 N1 A1IE5 26 A1IE5 C C20 C 0 1 N N N N N N 19.401 24.156 14.319 6.673 1.468 1.561 C A1IE5 27 A1IE5 H1 H1 H 0 1 N N N N N N 20.501 22.585 12.328 4.141 2.397 1.132 H1 A1IE5 28 A1IE5 H2 H2 H 0 1 N N N N N N 15.036 18.802 14.687 4.277 -2.085 -2.553 H2 A1IE5 29 A1IE5 H3 H3 H 0 1 N N N N N N 16.388 18.658 13.512 5.207 -3.666 -2.360 H3 A1IE5 30 A1IE5 H4 H4 H 0 1 N N N N N N 17.259 17.931 9.197 0.324 3.137 -0.912 H4 A1IE5 31 A1IE5 H5 H5 H 0 1 N N N N N N 17.761 15.988 7.762 -1.929 4.117 -1.056 H5 A1IE5 32 A1IE5 H6 H6 H 0 1 N N N N N N 20.066 15.171 7.555 -3.915 2.688 -0.794 H6 A1IE5 33 A1IE5 H7 H7 H 0 1 N N N N N N 21.395 18.181 10.285 -1.407 -0.718 -0.251 H7 A1IE5 34 A1IE5 H8 H8 H 0 1 N N N N N N 21.603 14.110 8.232 -4.860 1.205 1.251 H8 A1IE5 35 A1IE5 H9 H9 H 0 1 N N N N N N 23.317 14.163 8.769 -5.375 1.694 -0.384 H9 A1IE5 36 A1IE5 H10 H10 H 0 1 N N N N N N 23.961 16.090 7.391 -3.609 -1.116 -2.128 H10 A1IE5 37 A1IE5 H11 H11 H 0 1 N N N N N N 22.336 16.088 6.625 -5.304 -1.155 -1.586 H11 A1IE5 38 A1IE5 H12 H12 H 0 1 N N N N N N 22.968 17.587 7.388 -4.656 0.302 -2.377 H12 A1IE5 39 A1IE5 H13 H13 H 0 1 N N N N N N 22.656 14.653 12.266 -6.701 -1.877 1.387 H13 A1IE5 40 A1IE5 H14 H14 H 0 1 N N N N N N 20.796 14.357 10.473 -7.131 0.433 0.994 H14 A1IE5 41 A1IE5 H15 H15 H 0 1 N N N N N N 22.094 13.117 10.540 -6.786 -0.243 -0.614 H15 A1IE5 42 A1IE5 H16 H16 H 0 1 N N N N N N 17.951 19.269 10.920 1.042 -0.307 -0.830 H16 A1IE5 43 A1IE5 H17 H17 H 0 1 N N N N N N 15.383 21.311 14.859 5.594 -3.139 0.090 H17 A1IE5 44 A1IE5 H18 H18 H 0 1 N N N N N N 15.163 20.267 11.906 2.603 -2.856 -0.810 H18 A1IE5 45 A1IE5 H19 H19 H 0 1 N N N N N N 13.812 20.411 13.080 3.533 -4.437 -0.617 H19 A1IE5 46 A1IE5 H20 H20 H 0 1 N N N N N N 18.693 24.517 15.079 7.232 1.972 0.772 H20 A1IE5 47 A1IE5 H21 H21 H 0 1 N N N N N N 20.367 23.933 14.795 6.312 2.205 2.278 H21 A1IE5 48 A1IE5 H22 H22 H 0 1 N N N N N N 19.541 24.931 13.551 7.323 0.755 2.068 H22 A1IE5 49 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IE5 C19 C15 SING N N 1 A1IE5 C12 C11 DOUB Y N 2 A1IE5 C12 C13 SING Y N 3 A1IE5 C11 C10 SING Y N 4 A1IE5 C15 C13 SING N N 5 A1IE5 C15 C16 SING N N 6 A1IE5 C15 O2 SING N N 7 A1IE5 C13 C14 DOUB Y N 8 A1IE5 C16 C17 SING N N 9 A1IE5 C10 C9 DOUB Y N 10 A1IE5 C14 C9 SING Y N 11 A1IE5 O2 C18 SING N N 12 A1IE5 C9 N2 SING N N 13 A1IE5 C17 N3 SING N N 14 A1IE5 N2 C8 SING N N 15 A1IE5 O C8 DOUB N N 16 A1IE5 C8 C3 SING N N 17 A1IE5 C18 N3 SING N N 18 A1IE5 C18 O1 DOUB N N 19 A1IE5 C3 N DOUB Y N 20 A1IE5 C3 C2 SING Y N 21 A1IE5 N C4 SING Y N 22 A1IE5 C2 C1 DOUB Y N 23 A1IE5 C6 C7 SING N N 24 A1IE5 C6 C5 SING N N 25 A1IE5 C4 C5 SING N N 26 A1IE5 C4 N1 DOUB Y N 27 A1IE5 C1 N1 SING Y N 28 A1IE5 C1 C SING N N 29 A1IE5 C7 C5 SING N N 30 A1IE5 C2 H1 SING N N 31 A1IE5 C7 H2 SING N N 32 A1IE5 C7 H3 SING N N 33 A1IE5 C10 H4 SING N N 34 A1IE5 C11 H5 SING N N 35 A1IE5 C12 H6 SING N N 36 A1IE5 C14 H7 SING N N 37 A1IE5 C16 H8 SING N N 38 A1IE5 C16 H9 SING N N 39 A1IE5 C19 H10 SING N N 40 A1IE5 C19 H11 SING N N 41 A1IE5 C19 H12 SING N N 42 A1IE5 N3 H13 SING N N 43 A1IE5 C17 H14 SING N N 44 A1IE5 C17 H15 SING N N 45 A1IE5 N2 H16 SING N N 46 A1IE5 C5 H17 SING N N 47 A1IE5 C6 H18 SING N N 48 A1IE5 C6 H19 SING N N 49 A1IE5 C H20 SING N N 50 A1IE5 C H21 SING N N 51 A1IE5 C H22 SING N N 52 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1IE5 InChI InChI 1.06 "InChI=1S/C20H22N4O3/c1-12-10-16(24-17(22-12)13-6-7-13)18(25)23-15-5-3-4-14(11-15)20(2)8-9-21-19(26)27-20/h3-5,10-11,13H,6-9H2,1-2H3,(H,21,26)(H,23,25)/t20-/m0/s1" A1IE5 InChIKey InChI 1.06 GEVKVDLYMGMTDW-FQEVSTJZSA-N A1IE5 SMILES_CANONICAL CACTVS 3.385 "Cc1cc(nc(n1)C2CC2)C(=O)Nc3cccc(c3)[C@]4(C)CCNC(=O)O4" A1IE5 SMILES CACTVS 3.385 "Cc1cc(nc(n1)C2CC2)C(=O)Nc3cccc(c3)[C]4(C)CCNC(=O)O4" A1IE5 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cc(nc(n1)C2CC2)C(=O)Nc3cccc(c3)[C@@]4(CCNC(=O)O4)C" A1IE5 SMILES "OpenEye OEToolkits" 2.0.7 "Cc1cc(nc(n1)C2CC2)C(=O)Nc3cccc(c3)C4(CCNC(=O)O4)C" # _pdbx_chem_comp_identifier.comp_id A1IE5 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-cyclopropyl-6-methyl-~{N}-[3-[(6~{S})-6-methyl-2-oxidanylidene-1,3-oxazinan-6-yl]phenyl]pyrimidine-4-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1IE5 "Create component" 2024-06-18 PDBE A1IE5 "Initial release" 2024-07-31 RCSB #