data_A1IFO # _chem_comp.id A1IFO _chem_comp.name "3-[[[4-[(3-cyclopropyl-1~{H}-pyrazol-5-yl)amino]thieno[3,2-d]pyrimidin-2-yl]amino]methyl]benzamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H19 N7 O S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-06-25 _chem_comp.pdbx_modified_date 2026-01-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 405.476 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1IFO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9FR6 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1IFO C20 C1 C 0 1 Y N N N N N 1.152 -6.402 37.262 -3.251 -1.978 0.012 C20 A1IFO 1 A1IFO C18 C2 C 0 1 Y N N N N N 0.657 -4.265 35.901 -2.805 0.387 0.051 C18 A1IFO 2 A1IFO C17 C3 C 0 1 Y N N N N N -0.132 -0.729 34.916 -2.906 4.017 0.216 C17 A1IFO 3 A1IFO C16 C4 C 0 1 Y N N N N N -0.378 -0.455 36.302 -4.218 4.026 0.394 C16 A1IFO 4 A1IFO C02 C5 C 0 1 N N N N N N 5.610 -9.152 31.663 5.976 0.212 1.289 C02 A1IFO 5 A1IFO C04 C6 C 0 1 Y N N N N N 4.994 -7.835 32.183 5.115 0.546 0.135 C04 A1IFO 6 A1IFO C05 C7 C 0 1 Y N N N N N 5.779 -6.910 32.880 5.572 0.329 -1.166 C05 A1IFO 7 A1IFO C06 C8 C 0 1 Y N N N N N 5.203 -5.730 33.357 4.764 0.642 -2.239 C06 A1IFO 8 A1IFO C07 C9 C 0 1 Y N N N N N 3.846 -5.471 33.139 3.502 1.170 -2.028 C07 A1IFO 9 A1IFO C08 C10 C 0 1 Y N N N N N 3.064 -6.393 32.437 3.043 1.387 -0.741 C08 A1IFO 10 A1IFO C09 C11 C 0 1 N N N N N N 1.559 -6.133 32.193 1.668 1.963 -0.521 C09 A1IFO 11 A1IFO C11 C12 C 0 1 Y N N N N N 0.899 -4.094 33.591 -0.648 1.160 -0.218 C11 A1IFO 12 A1IFO C13 C13 C 0 1 Y N N N N N 0.256 -2.176 34.766 -2.317 2.750 0.084 C13 A1IFO 13 A1IFO C14 C14 C 0 1 Y N N N N N 0.294 -2.909 35.953 -3.249 1.715 0.167 C14 A1IFO 14 A1IFO C23 C15 C 0 1 Y N N N N N 2.057 -8.402 36.900 -1.946 -3.767 -0.248 C23 A1IFO 15 A1IFO C24 C16 C 0 1 N N N N N N 2.762 -9.606 36.259 -0.725 -4.625 -0.456 C24 A1IFO 16 A1IFO C25 C17 C 0 1 N N N N N N 4.113 -9.633 35.542 0.102 -4.988 0.779 C25 A1IFO 17 A1IFO C26 C18 C 0 1 N N N N N N 2.840 -10.061 34.802 0.642 -3.974 -0.232 C26 A1IFO 18 A1IFO C27 C19 C 0 1 Y N N N N N 1.829 -7.176 36.315 -1.963 -2.371 -0.184 C27 A1IFO 19 A1IFO C29 C20 C 0 1 Y N N N N N 3.641 -7.574 31.965 3.840 1.073 0.341 C29 A1IFO 20 A1IFO N03 N1 N 0 1 N N N N N N 5.532 -10.359 32.494 7.206 -0.302 1.087 N03 A1IFO 21 A1IFO N10 N2 N 0 1 N N N N N N 1.226 -4.709 32.304 0.693 0.874 -0.423 N10 A1IFO 22 A1IFO N12 N3 N 0 1 Y N N N N N 0.569 -2.814 33.614 -1.019 2.418 -0.116 N12 A1IFO 23 A1IFO N19 N4 N 0 1 N N N N N N 0.684 -5.017 37.155 -3.704 -0.665 0.128 N19 A1IFO 24 A1IFO N21 N5 N 0 1 Y N N N N N 1.003 -7.149 38.361 -4.016 -3.099 0.068 N21 A1IFO 25 A1IFO N22 N6 N 0 1 Y N N N N N 1.563 -8.373 38.111 -3.170 -4.203 -0.099 N22 A1IFO 26 A1IFO N28 N7 N 0 1 Y N N N N N 0.946 -4.823 34.716 -1.512 0.156 -0.138 N28 A1IFO 27 A1IFO O01 O1 O 0 1 N N N N N N 6.144 -9.197 30.604 5.576 0.402 2.421 O01 A1IFO 28 A1IFO S15 S1 S 0 1 Y N N N N N -0.123 -1.861 37.185 -4.854 2.389 0.411 S15 A1IFO 29 A1IFO H1 H1 H 0 1 N N N N N N -0.212 -0.014 34.111 -2.326 4.927 0.176 H1 A1IFO 30 A1IFO H2 H2 H 0 1 N N N N N N -0.678 0.499 36.711 -4.815 4.918 0.512 H2 A1IFO 31 A1IFO H3 H3 H 0 1 N N N N N N 6.827 -7.108 33.049 6.557 -0.083 -1.333 H3 A1IFO 32 A1IFO H4 H4 H 0 1 N N N N N N 5.808 -5.015 33.896 5.116 0.475 -3.246 H4 A1IFO 33 A1IFO H5 H5 H 0 1 N N N N N N 3.403 -4.560 33.513 2.873 1.413 -2.871 H5 A1IFO 34 A1IFO H6 H6 H 0 1 N N N N N N 0.976 -6.694 32.938 1.660 2.542 0.403 H6 A1IFO 35 A1IFO H7 H7 H 0 1 N N N N N N 1.297 -6.482 31.183 1.406 2.610 -1.357 H7 A1IFO 36 A1IFO H8 H8 H 0 1 N N N N N N 2.673 -10.482 36.918 -0.803 -5.371 -1.246 H8 A1IFO 37 A1IFO H9 H9 H 0 1 N N N N N N 4.868 -10.384 35.818 -0.238 -4.607 1.742 H9 A1IFO 38 A1IFO H10 H10 H 0 1 N N N N N N 4.614 -8.690 35.276 0.567 -5.974 0.802 H10 A1IFO 39 A1IFO H11 H11 H 0 1 N N N N N N 2.427 -9.426 34.004 1.462 -4.293 -0.875 H11 A1IFO 40 A1IFO H12 H12 H 0 1 N N N N N N 2.681 -11.119 34.547 0.658 -2.926 0.066 H12 A1IFO 41 A1IFO H13 H13 H 0 1 N N N N N N 2.117 -6.872 35.319 -1.106 -1.720 -0.273 H13 A1IFO 42 A1IFO H14 H14 H 0 1 N N N N N N 3.036 -8.290 31.428 3.478 1.239 1.345 H14 A1IFO 43 A1IFO H15 H15 H 0 1 N N N N N N 5.928 -11.217 32.168 7.525 -0.453 0.184 H15 A1IFO 44 A1IFO H16 H16 H 0 1 N N N N N N 5.083 -10.323 33.387 7.771 -0.521 1.844 H16 A1IFO 45 A1IFO H17 H17 H 0 1 N N N N N N 2.013 -4.207 31.944 0.986 -0.048 -0.501 H17 A1IFO 46 A1IFO H18 H18 H 0 1 N N N N N N 0.365 -4.561 37.986 -4.648 -0.487 0.262 H18 A1IFO 47 A1IFO H19 H19 H 0 1 N N N N N N 0.562 -6.865 39.212 -4.977 -3.129 0.199 H19 A1IFO 48 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IFO O01 C02 DOUB N N 1 A1IFO C02 C04 SING N N 2 A1IFO C02 N03 SING N N 3 A1IFO C29 C04 DOUB Y N 4 A1IFO C29 C08 SING Y N 5 A1IFO C04 C05 SING Y N 6 A1IFO C09 N10 SING N N 7 A1IFO C09 C08 SING N N 8 A1IFO N10 C11 SING N N 9 A1IFO C08 C07 DOUB Y N 10 A1IFO C05 C06 DOUB Y N 11 A1IFO C07 C06 SING Y N 12 A1IFO C11 N12 DOUB Y N 13 A1IFO C11 N28 SING Y N 14 A1IFO N12 C13 SING Y N 15 A1IFO N28 C18 DOUB Y N 16 A1IFO C13 C17 SING Y N 17 A1IFO C13 C14 DOUB Y N 18 A1IFO C26 C25 SING N N 19 A1IFO C26 C24 SING N N 20 A1IFO C17 C16 DOUB Y N 21 A1IFO C25 C24 SING N N 22 A1IFO C18 C14 SING Y N 23 A1IFO C18 N19 SING N N 24 A1IFO C14 S15 SING Y N 25 A1IFO C24 C23 SING N N 26 A1IFO C16 S15 SING Y N 27 A1IFO C27 C23 SING Y N 28 A1IFO C27 C20 DOUB Y N 29 A1IFO C23 N22 DOUB Y N 30 A1IFO N19 C20 SING N N 31 A1IFO C20 N21 SING Y N 32 A1IFO N22 N21 SING Y N 33 A1IFO C17 H1 SING N N 34 A1IFO C16 H2 SING N N 35 A1IFO C05 H3 SING N N 36 A1IFO C06 H4 SING N N 37 A1IFO C07 H5 SING N N 38 A1IFO C09 H6 SING N N 39 A1IFO C09 H7 SING N N 40 A1IFO C24 H8 SING N N 41 A1IFO C25 H9 SING N N 42 A1IFO C25 H10 SING N N 43 A1IFO C26 H11 SING N N 44 A1IFO C26 H12 SING N N 45 A1IFO C27 H13 SING N N 46 A1IFO C29 H14 SING N N 47 A1IFO N03 H15 SING N N 48 A1IFO N03 H16 SING N N 49 A1IFO N10 H17 SING N N 50 A1IFO N19 H18 SING N N 51 A1IFO N21 H19 SING N N 52 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1IFO InChI InChI 1.06 "InChI=1S/C20H19N7OS/c21-18(28)13-3-1-2-11(8-13)10-22-20-23-14-6-7-29-17(14)19(25-20)24-16-9-15(26-27-16)12-4-5-12/h1-3,6-9,12H,4-5,10H2,(H2,21,28)(H3,22,23,24,25,26,27)" A1IFO InChIKey InChI 1.06 MPJHZOCLIMYPIM-UHFFFAOYSA-N A1IFO SMILES_CANONICAL CACTVS 3.385 "NC(=O)c1cccc(CNc2nc(Nc3[nH]nc(c3)C4CC4)c5sccc5n2)c1" A1IFO SMILES CACTVS 3.385 "NC(=O)c1cccc(CNc2nc(Nc3[nH]nc(c3)C4CC4)c5sccc5n2)c1" A1IFO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)C(=O)N)CNc2nc3ccsc3c(n2)Nc4cc(n[nH]4)C5CC5" A1IFO SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)C(=O)N)CNc2nc3ccsc3c(n2)Nc4cc(n[nH]4)C5CC5" # _pdbx_chem_comp_identifier.comp_id A1IFO _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "3-[[[4-[(3-cyclopropyl-1~{H}-pyrazol-5-yl)amino]thieno[3,2-d]pyrimidin-2-yl]amino]methyl]benzamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1IFO "Create component" 2024-06-25 PDBE A1IFO "Initial release" 2026-01-14 RCSB #