data_A1IH2 # _chem_comp.id A1IH2 _chem_comp.name "Salvianolic acid P" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H22 O12" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(2~{S},3~{S})-3-[3,4-bis(oxidanyl)phenyl]-6-[(~{E})-3-[(2~{R})-3-[3,4-bis(oxidanyl)phenyl]-1-oxidanyl-1-oxidanylidene-propan-2-yl]oxy-3-oxidanylidene-prop-1-enyl]-2,3-dihydro-1,4-benzodioxine-2-carboxylic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-07-11 _chem_comp.pdbx_modified_date 2025-01-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 538.456 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1IH2 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9G38 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1IH2 C1 C1 C 0 1 Y N N N N N -1.309 17.381 14.014 6.843 -0.477 0.137 C1 A1IH2 1 A1IH2 C2 C2 C 0 1 Y N N N N N -2.331 18.183 14.584 7.305 -1.160 -0.973 C2 A1IH2 2 A1IH2 C3 C3 C 0 1 Y N N N N N -3.543 18.362 13.987 7.127 -2.531 -1.066 C3 A1IH2 3 A1IH2 C4 C4 C 0 1 Y N N N N N -3.784 17.758 12.734 6.482 -3.217 -0.041 C4 A1IH2 4 A1IH2 C5 C5 C 0 1 Y N N N N N -2.762 16.944 12.168 6.022 -2.527 1.068 C5 A1IH2 5 A1IH2 C6 C6 C 0 1 Y N N N N N -1.567 16.770 12.779 6.207 -1.159 1.158 C6 A1IH2 6 A1IH2 O3 O1 O 0 1 N N N N N N -4.471 19.189 14.603 7.580 -3.204 -2.157 O3 A1IH2 7 A1IH2 O4 O2 O 0 1 N N N N N N -4.955 17.931 12.103 6.305 -4.563 -0.128 O4 A1IH2 8 A1IH2 C20 C7 C 0 1 Y N N N N N -3.247 3.839 15.099 -7.280 0.999 -0.118 C20 A1IH2 9 A1IH2 C21 C8 C 0 1 Y N N N N N -4.180 2.978 15.620 -8.378 0.655 -0.891 C21 A1IH2 10 A1IH2 O21 O3 O 0 1 N N N N N N -3.871 1.900 16.411 -9.540 1.351 -0.771 O21 A1IH2 11 A1IH2 C22 C9 C 0 1 Y N N N N N -5.511 3.136 15.373 -8.288 -0.404 -1.789 C22 A1IH2 12 A1IH2 O22 O4 O 0 1 N N N N N N -6.290 2.205 15.907 -9.363 -0.745 -2.550 O22 A1IH2 13 A1IH2 C23 C10 C 0 1 Y N N N N N -5.965 4.174 14.588 -7.102 -1.110 -1.907 C23 A1IH2 14 A1IH2 C24 C11 C 0 1 Y N N N N N -5.037 5.097 14.065 -6.010 -0.762 -1.133 C24 A1IH2 15 A1IH2 C19 C12 C 0 1 Y N N N N N -3.662 4.887 14.306 -6.098 0.294 -0.245 C19 A1IH2 16 A1IH2 C25 C13 C 0 1 N N S N N N -2.550 5.777 13.804 -4.905 0.669 0.596 C25 A1IH2 17 A1IH2 C26 C14 C 0 1 N N S N N N -2.289 5.817 12.277 -4.782 -0.299 1.781 C26 A1IH2 18 A1IH2 O13 O5 O 0 1 N N N N N N -2.296 7.168 11.801 -3.636 0.079 2.551 O13 A1IH2 19 A1IH2 C27 C15 C 0 1 N N N N N N -3.149 4.836 11.417 -4.611 -1.707 1.271 C27 A1IH2 20 A1IH2 O29 O6 O 0 1 N N N N N N -4.194 5.286 10.834 -3.582 -2.304 1.479 O29 A1IH2 21 A1IH2 O28 O7 O 0 1 N N N N N N -2.731 3.669 11.310 -5.603 -2.297 0.586 O28 A1IH2 22 A1IH2 O12 O8 O 0 1 N N N N N N -2.680 7.103 14.331 -3.711 0.571 -0.188 O12 A1IH2 23 A1IH2 C12 C16 C 0 1 Y N N N N N -1.959 8.147 13.872 -2.531 0.586 0.490 C12 A1IH2 24 A1IH2 C11 C17 C 0 1 Y N N N N N -1.505 9.101 14.714 -1.361 0.851 -0.196 C11 A1IH2 25 A1IH2 C13 C18 C 0 1 Y N N N N N -1.770 8.179 12.528 -2.493 0.337 1.861 C13 A1IH2 26 A1IH2 C14 C19 C 0 1 Y N N N N N -1.055 9.181 11.914 -1.279 0.352 2.539 C14 A1IH2 27 A1IH2 C15 C20 C 0 1 Y N N N N N -0.561 10.175 12.743 -0.109 0.614 1.862 C15 A1IH2 28 A1IH2 C10 C21 C 0 1 Y N N N N N -0.774 10.142 14.143 -0.139 0.867 0.486 C10 A1IH2 29 A1IH2 C16 C22 C 0 1 N N N N N N -0.235 11.237 14.936 1.108 1.148 -0.239 C16 A1IH2 30 A1IH2 C17 C23 C 0 1 N N N N N N -0.340 12.552 14.566 2.286 1.163 0.422 C17 A1IH2 31 A1IH2 C18 C24 C 0 1 N N N N N N -0.119 13.653 15.468 3.488 1.434 -0.278 C18 A1IH2 32 A1IH2 O20 O9 O 0 1 N N N N N N -0.022 13.581 16.652 3.460 1.654 -1.474 O20 A1IH2 33 A1IH2 O19 O10 O 0 1 N N N N N N 0.011 14.842 14.789 4.665 1.448 0.382 O19 A1IH2 34 A1IH2 C8 C25 C 0 1 N N R N N N 0.085 16.024 15.637 5.837 1.728 -0.386 C8 A1IH2 35 A1IH2 C9 C26 C 0 1 N N N N N N 1.378 16.092 16.422 6.087 3.214 -0.397 C9 A1IH2 36 A1IH2 O11 O11 O 0 1 N N N N N N 1.455 16.686 17.502 7.080 3.722 -1.143 O11 A1IH2 37 A1IH2 O10 O12 O 0 1 N N N N N N 2.360 15.472 15.800 5.392 3.949 0.266 O10 A1IH2 38 A1IH2 C7 C27 C 0 1 N N N N N N 0.012 17.226 14.737 7.038 1.014 0.237 C7 A1IH2 39 A1IH2 H1 H1 H 0 1 N N N N N N -2.141 18.671 15.529 7.804 -0.625 -1.767 H1 A1IH2 40 A1IH2 H2 H2 H 0 1 N N N N N N -2.946 16.452 11.225 5.521 -3.057 1.865 H2 A1IH2 41 A1IH2 H3 H3 H 0 1 N N N N N N -0.809 16.158 12.313 5.848 -0.622 2.023 H3 A1IH2 42 A1IH2 H4 H4 H 0 1 N N N N N N -4.123 19.494 15.433 8.487 -3.527 -2.071 H4 A1IH2 43 A1IH2 H5 H5 H 0 1 N N N N N N -5.513 18.499 12.621 7.029 -5.080 0.249 H5 A1IH2 44 A1IH2 H6 H6 H 0 1 N N N N N N -2.197 3.697 15.308 -7.347 1.820 0.580 H6 A1IH2 45 A1IH2 H7 H7 H 0 1 N N N N N N -4.669 1.447 16.656 -9.607 2.110 -1.367 H7 A1IH2 46 A1IH2 H8 H8 H 0 1 N N N N N N -5.759 1.595 16.406 -9.404 -0.286 -3.400 H8 A1IH2 47 A1IH2 H9 H9 H 0 1 N N N N N N -7.019 4.279 14.376 -7.030 -1.932 -2.603 H9 A1IH2 48 A1IH2 H10 H10 H 0 1 N N N N N N -5.371 5.948 13.491 -5.085 -1.310 -1.229 H10 A1IH2 49 A1IH2 H11 H11 H 0 1 N N N N N N -1.628 5.363 14.238 -5.021 1.689 0.964 H11 A1IH2 50 A1IH2 H12 H12 H 0 1 N N N N N N -1.256 5.458 12.159 -5.677 -0.238 2.400 H12 A1IH2 51 A1IH2 H13 H13 H 0 1 N N N N N N -3.306 3.178 10.735 -5.447 -3.201 0.279 H13 A1IH2 52 A1IH2 H14 H14 H 0 1 N N N N N N -1.699 9.059 15.776 -1.389 1.046 -1.258 H14 A1IH2 53 A1IH2 H15 H15 H 0 1 N N N N N N -0.888 9.192 10.847 -1.255 0.157 3.601 H15 A1IH2 54 A1IH2 H16 H16 H 0 1 N N N N N N -0.002 10.992 12.313 0.831 0.624 2.394 H16 A1IH2 55 A1IH2 H17 H17 H 0 1 N N N N N N 0.272 11.002 15.860 1.082 1.344 -1.301 H17 A1IH2 56 A1IH2 H18 H18 H 0 1 N N N N N N -0.603 12.775 13.542 2.311 0.967 1.484 H18 A1IH2 57 A1IH2 H19 H19 H 0 1 N N N N N N -0.764 16.040 16.336 5.694 1.376 -1.407 H19 A1IH2 58 A1IH2 H20 H20 H 0 1 N N N N N N 2.345 16.632 17.831 7.202 4.681 -1.117 H20 A1IH2 59 A1IH2 H21 H21 H 0 1 N N N N N N 0.810 17.142 13.984 7.127 1.299 1.285 H21 A1IH2 60 A1IH2 H22 H22 H 0 1 N N N N N N 0.178 18.125 15.348 7.946 1.298 -0.295 H22 A1IH2 61 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IH2 O29 C27 DOUB N N 1 A1IH2 O28 C27 SING N N 2 A1IH2 C27 C26 SING N N 3 A1IH2 O13 C26 SING N N 4 A1IH2 O13 C13 SING N N 5 A1IH2 C14 C13 DOUB Y N 6 A1IH2 C14 C15 SING Y N 7 A1IH2 O4 C4 SING N N 8 A1IH2 C5 C4 DOUB Y N 9 A1IH2 C5 C6 SING Y N 10 A1IH2 C26 C25 SING N N 11 A1IH2 C13 C12 SING Y N 12 A1IH2 C4 C3 SING Y N 13 A1IH2 C15 C10 DOUB Y N 14 A1IH2 C6 C1 DOUB Y N 15 A1IH2 C25 C19 SING N N 16 A1IH2 C25 O12 SING N N 17 A1IH2 C12 O12 SING N N 18 A1IH2 C12 C11 DOUB Y N 19 A1IH2 C3 C2 DOUB Y N 20 A1IH2 C3 O3 SING N N 21 A1IH2 C1 C2 SING Y N 22 A1IH2 C1 C7 SING N N 23 A1IH2 C24 C19 DOUB Y N 24 A1IH2 C24 C23 SING Y N 25 A1IH2 C10 C11 SING Y N 26 A1IH2 C10 C16 SING N N 27 A1IH2 C19 C20 SING Y N 28 A1IH2 C17 C16 DOUB N E 29 A1IH2 C17 C18 SING N N 30 A1IH2 C23 C22 DOUB Y N 31 A1IH2 C7 C8 SING N N 32 A1IH2 O19 C18 SING N N 33 A1IH2 O19 C8 SING N N 34 A1IH2 C20 C21 DOUB Y N 35 A1IH2 C22 C21 SING Y N 36 A1IH2 C22 O22 SING N N 37 A1IH2 C18 O20 DOUB N N 38 A1IH2 C21 O21 SING N N 39 A1IH2 C8 C9 SING N N 40 A1IH2 O10 C9 DOUB N N 41 A1IH2 C9 O11 SING N N 42 A1IH2 C2 H1 SING N N 43 A1IH2 C5 H2 SING N N 44 A1IH2 C6 H3 SING N N 45 A1IH2 O3 H4 SING N N 46 A1IH2 O4 H5 SING N N 47 A1IH2 C20 H6 SING N N 48 A1IH2 O21 H7 SING N N 49 A1IH2 O22 H8 SING N N 50 A1IH2 C23 H9 SING N N 51 A1IH2 C24 H10 SING N N 52 A1IH2 C25 H11 SING N N 53 A1IH2 C26 H12 SING N N 54 A1IH2 O28 H13 SING N N 55 A1IH2 C11 H14 SING N N 56 A1IH2 C14 H15 SING N N 57 A1IH2 C15 H16 SING N N 58 A1IH2 C16 H17 SING N N 59 A1IH2 C17 H18 SING N N 60 A1IH2 C8 H19 SING N N 61 A1IH2 O11 H20 SING N N 62 A1IH2 C7 H21 SING N N 63 A1IH2 C7 H22 SING N N 64 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1IH2 InChI InChI 1.06 "InChI=1S/C27H22O12/c28-16-5-1-14(9-18(16)30)11-22(26(33)34)37-23(32)8-3-13-2-7-20-21(10-13)39-24(25(38-20)27(35)36)15-4-6-17(29)19(31)12-15/h1-10,12,22,24-25,28-31H,11H2,(H,33,34)(H,35,36)/b8-3+/t22-,24+,25+/m1/s1" A1IH2 InChIKey InChI 1.06 OYJXZGLYUDCECY-RXYMDKBQSA-N A1IH2 SMILES_CANONICAL CACTVS 3.385 "OC(=O)[C@@H](Cc1ccc(O)c(O)c1)OC(=O)\C=C\c2ccc3O[C@@H]([C@@H](Oc3c2)c4ccc(O)c(O)c4)C(O)=O" A1IH2 SMILES CACTVS 3.385 "OC(=O)[CH](Cc1ccc(O)c(O)c1)OC(=O)C=Cc2ccc3O[CH]([CH](Oc3c2)c4ccc(O)c(O)c4)C(O)=O" A1IH2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1C[C@H](C(=O)O)OC(=O)/C=C/c2ccc3c(c2)O[C@H]([C@H](O3)C(=O)O)c4ccc(c(c4)O)O)O)O" A1IH2 SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1CC(C(=O)O)OC(=O)C=Cc2ccc3c(c2)OC(C(O3)C(=O)O)c4ccc(c(c4)O)O)O)O" # _pdbx_chem_comp_identifier.comp_id A1IH2 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S},3~{S})-3-[3,4-bis(oxidanyl)phenyl]-6-[(~{E})-3-[(2~{R})-3-[3,4-bis(oxidanyl)phenyl]-1-oxidanyl-1-oxidanylidene-propan-2-yl]oxy-3-oxidanylidene-prop-1-enyl]-2,3-dihydro-1,4-benzodioxine-2-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1IH2 "Create component" 2024-07-11 PDBE A1IH2 "Initial release" 2025-01-22 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id A1IH2 _pdbx_chem_comp_synonyms.name "(2~{S},3~{S})-3-[3,4-bis(oxidanyl)phenyl]-6-[(~{E})-3-[(2~{R})-3-[3,4-bis(oxidanyl)phenyl]-1-oxidanyl-1-oxidanylidene-propan-2-yl]oxy-3-oxidanylidene-prop-1-enyl]-2,3-dihydro-1,4-benzodioxine-2-carboxylic acid" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? #