data_A1IHW # _chem_comp.id A1IHW _chem_comp.name "4-[11-(4-cyanophenyl)-1,5-bis($l^{1}-oxidanyl)-3,7-dimethyl-2,4,6,8-tetraoxa-9,11-diaza-1$l^{5},5$l^{5}-diruthenatricyclo[3.3.3.0^{1,5}]undecan-9-yl]benzenecarbonitrile" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H20 N4 O6 Ru2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-07-09 _chem_comp.pdbx_modified_date 2024-11-22 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 602.525 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1IHW _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9FYW _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1IHW RU1 RU1 RU 0 0 N N N N N N -45.696 0.203 -7.442 1.273 1.538 0.298 RU1 A1IHW 1 A1IHW RU2 RU2 RU 0 0 N N N N N N -44.960 2.287 -6.826 -0.932 1.163 -0.670 RU2 A1IHW 2 A1IHW O6 O1 O 0 1 N N N N N N -44.290 2.513 -8.732 0.022 0.283 -1.956 O6 A1IHW 3 A1IHW O1 O2 O 0 1 N N N N N N -46.253 -0.035 -5.496 0.627 2.025 1.937 O1 A1IHW 4 A1IHW O2 O3 O 0 1 N N N N N N -45.712 1.988 -4.953 -1.522 2.125 0.780 O2 A1IHW 5 A1IHW O5 O4 O 0 1 N N N N N N -45.133 0.573 -9.360 2.224 1.225 -1.220 O5 A1IHW 6 A1IHW O3 O5 O 0 1 N N N N N N -43.787 -0.428 -7.008 1.184 3.312 -0.194 O3 A1IHW 7 A1IHW O4 O6 O 0 1 N N N N N N -43.203 1.382 -6.281 -1.809 2.211 -1.865 O4 A1IHW 8 A1IHW N2 N1 N 0 1 N N N N N N -46.725 2.985 -7.563 -1.384 -0.467 0.262 N2 A1IHW 9 A1IHW N1 N2 N 0 1 N N N N N N -47.559 0.919 -7.863 1.114 -0.356 0.637 N1 A1IHW 10 A1IHW C1 C1 C 0 1 N N N N N N -46.302 1.095 -4.707 -0.564 2.769 1.575 C1 A1IHW 11 A1IHW C7 C2 C 0 1 N N N N N N -47.628 2.193 -8.132 -0.190 -0.816 1.032 C7 A1IHW 12 A1IHW N3 N3 N 0 1 N N N N N N -53.234 -2.717 -8.511 6.280 -4.654 0.049 N3 A1IHW 13 A1IHW C5 C3 C 0 1 N N N N N N -44.535 1.651 -9.647 1.390 0.456 -2.085 C5 A1IHW 14 A1IHW C2 C4 C 0 1 N N N N N N -47.158 1.154 -3.493 -1.250 3.241 2.867 C2 A1IHW 15 A1IHW C20 C5 C 0 1 Y N N N N N -47.793 5.044 -6.913 -2.721 -2.336 0.969 C20 A1IHW 16 A1IHW C9 C6 C 0 1 Y N N N N N -49.793 0.292 -7.181 3.490 -0.765 0.401 C9 A1IHW 17 A1IHW C10 C7 C 0 1 Y N N N N N -50.940 -0.442 -7.319 4.546 -1.639 0.280 C10 A1IHW 18 A1IHW C15 C8 C 0 1 Y N N N N N -46.934 4.352 -7.764 -2.578 -1.169 0.223 C15 A1IHW 19 A1IHW C8 C9 C 0 1 Y N N N N N -48.764 0.128 -8.031 2.191 -1.252 0.515 C8 A1IHW 20 A1IHW C6 C10 C 0 1 N N N N N N -44.103 1.955 -11.070 2.016 -0.951 -2.186 C6 A1IHW 21 A1IHW C13 C11 C 0 1 Y N N N N N -48.834 -0.824 -9.096 1.956 -2.624 0.508 C13 A1IHW 22 A1IHW C16 C12 C 0 1 Y N N N N N -46.223 4.953 -8.796 -3.631 -0.707 -0.561 C16 A1IHW 23 A1IHW C17 C13 C 0 1 Y N N N N N -46.389 6.288 -9.001 -4.818 -1.402 -0.601 C17 A1IHW 24 A1IHW C11 C14 C 0 1 Y N N N N N -51.027 -1.367 -8.335 4.313 -3.018 0.273 C11 A1IHW 25 A1IHW C14 C15 C 0 1 N N N N N N -52.223 -2.124 -8.457 5.410 -3.930 0.148 C14 A1IHW 26 A1IHW N4 N4 N 0 1 N N N N N N -47.506 9.535 -8.638 -7.178 -3.875 0.076 N4 A1IHW 27 A1IHW C12 C16 C 0 1 Y N N N N N -49.972 -1.562 -9.228 3.007 -3.503 0.389 C12 A1IHW 28 A1IHW C18 C17 C 0 1 Y N N N N N -47.237 7.007 -8.194 -4.965 -2.574 0.147 C18 A1IHW 29 A1IHW C19 C18 C 0 1 Y N N N N N -47.929 6.423 -7.155 -3.906 -3.036 0.933 C19 A1IHW 30 A1IHW C21 C19 C 0 1 N N N N N N -47.413 8.415 -8.405 -6.199 -3.300 0.108 C21 A1IHW 31 A1IHW H5 H5 H 0 1 N N N N N N -45.468 0.710 -4.102 -0.235 3.666 1.025 H5 A1IHW 32 A1IHW H8 H8 H 0 1 N N N N N N -48.622 2.544 -7.816 -0.348 -0.456 2.061 H8 A1IHW 33 A1IHW H9 H9 H 0 1 N N N N N N -47.528 2.307 -9.222 -0.137 -1.913 1.086 H9 A1IHW 34 A1IHW H10 H10 H 0 1 N N N N N N -43.566 1.167 -9.454 1.525 0.916 -3.093 H10 A1IHW 35 A1IHW H11 H11 H 0 1 N N N N N N -47.049 2.138 -3.014 -0.567 3.878 3.429 H11 A1IHW 36 A1IHW H12 H12 H 0 1 N N N N N N -48.209 0.999 -3.778 -2.149 3.804 2.616 H12 A1IHW 37 A1IHW H13 H13 H 0 1 N N N N N N -46.850 0.368 -2.788 -1.520 2.375 3.471 H13 A1IHW 38 A1IHW H14 H14 H 0 1 N N N N N N -48.324 4.550 -6.113 -1.901 -2.694 1.573 H14 A1IHW 39 A1IHW H15 H15 H 0 1 N N N N N N -49.713 1.012 -6.380 3.670 0.300 0.411 H15 A1IHW 40 A1IHW H16 H16 H 0 1 N N N N N N -51.767 -0.297 -6.639 5.554 -1.261 0.192 H16 A1IHW 41 A1IHW H17 H17 H 0 1 N N N N N N -44.386 1.119 -11.726 1.827 -1.363 -3.177 H17 A1IHW 42 A1IHW H18 H18 H 0 1 N N N N N N -44.597 2.875 -11.414 3.091 -0.884 -2.019 H18 A1IHW 43 A1IHW H19 H19 H 0 1 N N N N N N -43.012 2.091 -11.101 1.572 -1.602 -1.432 H19 A1IHW 44 A1IHW H20 H20 H 0 1 N N N N N N -48.007 -0.955 -9.778 0.947 -2.998 0.598 H20 A1IHW 45 A1IHW H21 H21 H 0 1 N N N N N N -45.556 4.376 -9.419 -3.516 0.199 -1.138 H21 A1IHW 46 A1IHW H22 H22 H 0 1 N N N N N N -45.854 6.782 -9.798 -5.635 -1.043 -1.210 H22 A1IHW 47 A1IHW H23 H23 H 0 1 N N N N N N -50.057 -2.293 -10.018 2.824 -4.568 0.384 H23 A1IHW 48 A1IHW H24 H24 H 0 1 N N N N N N -48.573 7.022 -6.529 -4.016 -3.941 1.512 H24 A1IHW 49 A1IHW H1 H1 H 0 1 N N N N N N -42.602 2.035 -5.943 -2.679 1.875 -2.119 H1 A1IHW 50 A1IHW H2 H2 H 0 1 N N N N N N -43.718 -1.362 -7.168 1.965 3.827 0.051 H2 A1IHW 51 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IHW RU1 RU2 SING N N 1 A1IHW RU2 O6 SING N N 2 A1IHW RU1 O1 SING N N 3 A1IHW RU2 O2 SING N N 4 A1IHW RU1 O5 SING N N 5 A1IHW RU1 O3 SING N N 6 A1IHW RU2 O4 SING N N 7 A1IHW RU2 N2 SING N N 8 A1IHW RU1 N1 SING N N 9 A1IHW N2 C7 SING N N 10 A1IHW N1 C7 SING N N 11 A1IHW O6 C5 SING N N 12 A1IHW O5 C5 SING N N 13 A1IHW C9 C10 SING Y N 14 A1IHW N2 C15 SING N N 15 A1IHW C1 C2 SING N N 16 A1IHW C20 C15 SING Y N 17 A1IHW N1 C8 SING N N 18 A1IHW C9 C8 DOUB Y N 19 A1IHW C5 C6 SING N N 20 A1IHW C8 C13 SING Y N 21 A1IHW C15 C16 DOUB Y N 22 A1IHW C16 C17 SING Y N 23 A1IHW C10 C11 DOUB Y N 24 A1IHW N3 C14 TRIP N N 25 A1IHW C11 C14 SING N N 26 A1IHW C13 C12 DOUB Y N 27 A1IHW C11 C12 SING Y N 28 A1IHW C17 C18 DOUB Y N 29 A1IHW C20 C19 DOUB Y N 30 A1IHW C18 C19 SING Y N 31 A1IHW N4 C21 TRIP N N 32 A1IHW C18 C21 SING N N 33 A1IHW C1 H5 SING N N 34 A1IHW C7 H8 SING N N 35 A1IHW C7 H9 SING N N 36 A1IHW C5 H10 SING N N 37 A1IHW C2 H11 SING N N 38 A1IHW C2 H12 SING N N 39 A1IHW C2 H13 SING N N 40 A1IHW C20 H14 SING N N 41 A1IHW C9 H15 SING N N 42 A1IHW C10 H16 SING N N 43 A1IHW C6 H17 SING N N 44 A1IHW C6 H18 SING N N 45 A1IHW C6 H19 SING N N 46 A1IHW C13 H20 SING N N 47 A1IHW C16 H21 SING N N 48 A1IHW C17 H22 SING N N 49 A1IHW C12 H23 SING N N 50 A1IHW C19 H24 SING N N 51 A1IHW O1 C1 SING N N 52 A1IHW O2 C1 SING N N 53 A1IHW O4 H1 SING N N 54 A1IHW O3 H2 SING N N 55 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1IHW InChI InChI 1.06 "InChI=1S/C15H10N4.2C2H4O2.2H2O.2Ru/c16-9-12-1-5-14(6-2-12)18-11-19-15-7-3-13(10-17)4-8-15;2*1-2(3)4;;;;/h1-8H,11H2;2*2H,1H3;2*1H2;;/q3*-2;;;2*+4/p-2" A1IHW InChIKey InChI 1.06 RVPMMJARIZYFTQ-UHFFFAOYSA-L A1IHW SMILES_CANONICAL CACTVS 3.385 "C[C@H]1O[Ru]2(O)O[C@@H](C)O[Ru](O)(O1)N(CN2c3ccc(cc3)C#N)c4ccc(cc4)C#N" A1IHW SMILES CACTVS 3.385 "C[CH]1O[Ru]2(O)O[CH](C)O[Ru](O)(O1)N(CN2c3ccc(cc3)C#N)c4ccc(cc4)C#N" A1IHW SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1O[Ru]23(N(CN([Ru]2(O1)(OC(O3)C)O)c4ccc(cc4)C#N)c5ccc(cc5)C#N)O" A1IHW SMILES "OpenEye OEToolkits" 2.0.7 "CC1O[Ru]23(N(CN([Ru]2(O1)(OC(O3)C)O)c4ccc(cc4)C#N)c5ccc(cc5)C#N)O" # _pdbx_chem_comp_identifier.comp_id A1IHW _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "4-[11-(4-cyanophenyl)-3,7-dimethyl-1,5-bis(oxidanyl)-2,4,6,8-tetraoxa-9,11-diaza-1$l^{5},5$l^{5}-diruthenatricyclo[3.3.3.0^{1,5}]undecan-9-yl]benzenecarbonitrile" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1IHW "Create component" 2024-07-09 PDBE A1IHW "Other modification" 2024-07-09 PDBE A1IHW "Initial release" 2024-11-27 RCSB #