data_A1IIM # _chem_comp.id A1IIM _chem_comp.name "4-[(3~{R})-3-(cyclopropylmethylamino)piperidin-1-yl]-1-[(1~{R})-1-[4-(6-pyrrolidin-1-ylpyrazin-2-yl)-1,2,3-triazol-1-yl]ethyl]pyridin-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H35 N9 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-07-17 _chem_comp.pdbx_modified_date 2025-02-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 489.616 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1IIM _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9G4W _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1IIM C1 C1 C 0 1 N N N N N N -40.505 41.934 22.837 7.931 0.261 1.460 C1 A1IIM 1 A1IIM C2 C2 C 0 1 N N N N N N -40.916 42.030 21.392 8.055 1.799 1.500 C2 A1IIM 2 A1IIM C3 C3 C 0 1 N N N N N N -42.237 41.316 21.312 8.929 2.111 0.257 C3 A1IIM 3 A1IIM C4 C4 C 0 1 N N N N N N -42.145 40.217 22.327 8.435 1.043 -0.749 C4 A1IIM 4 A1IIM N1 N1 N 0 1 N N N N N N -41.185 40.728 23.297 8.185 -0.162 0.071 N1 A1IIM 5 A1IIM C5 C5 C 0 1 Y N N N N N -40.930 40.152 24.496 7.114 -0.893 -0.431 C5 A1IIM 6 A1IIM C6 C6 C 0 1 Y N N N N N -39.964 40.685 25.368 7.345 -1.975 -1.277 C6 A1IIM 7 A1IIM N2 N2 N 0 1 Y N N N N N -39.727 40.163 26.566 6.329 -2.671 -1.755 N2 A1IIM 8 A1IIM C7 C7 C 0 1 Y N N N N N -40.408 39.070 26.897 5.090 -2.344 -1.433 C7 A1IIM 9 A1IIM C8 C8 C 0 1 Y N N N N N -41.349 38.515 26.036 4.851 -1.263 -0.587 C8 A1IIM 10 A1IIM N3 N3 N 0 1 Y N N N N N -41.605 39.046 24.830 5.873 -0.563 -0.100 N3 A1IIM 11 A1IIM C9 C9 C 0 1 Y N N N N N -42.120 37.339 26.417 3.461 -0.895 -0.227 C9 A1IIM 12 A1IIM C10 C10 C 0 1 Y N N N N N -43.058 36.661 25.691 3.067 0.134 0.581 C10 A1IIM 13 A1IIM N4 N4 N 0 1 Y N N N N N -43.448 35.657 26.494 1.717 0.083 0.619 N4 A1IIM 14 A1IIM N5 N5 N 0 1 Y N N N N N -42.832 35.731 27.715 1.324 -0.901 -0.109 N5 A1IIM 15 A1IIM N6 N6 N 0 1 Y N N N N N -41.996 36.752 27.642 2.332 -1.505 -0.634 N6 A1IIM 16 A1IIM C11 C11 C 0 1 N N R N N N -44.459 34.656 26.222 0.848 0.996 1.365 C11 A1IIM 17 A1IIM C12 C12 C 0 1 N N N N N N -44.727 33.784 27.446 0.712 0.506 2.808 C12 A1IIM 18 A1IIM N7 N7 N 0 1 N N N N N N -44.148 33.814 25.058 -0.474 1.035 0.736 N7 A1IIM 19 A1IIM C13 C13 C 0 1 N N N N N N -43.201 32.831 25.166 -0.955 2.216 0.264 C13 A1IIM 20 A1IIM C14 C14 C 0 1 N N N N N N -42.949 31.993 24.139 -2.169 2.285 -0.321 C14 A1IIM 21 A1IIM C15 C15 C 0 1 N N N N N N -43.668 32.115 22.941 -2.954 1.119 -0.447 C15 A1IIM 22 A1IIM C16 C16 C 0 1 N N N N N N -44.668 33.085 22.841 -2.455 -0.080 0.036 C16 A1IIM 23 A1IIM C17 C17 C 0 1 N N N N N N -44.931 33.955 23.906 -1.190 -0.100 0.630 C17 A1IIM 24 A1IIM O1 O1 O 0 1 N N N N N N -45.760 34.871 23.836 -0.736 -1.149 1.061 O1 A1IIM 25 A1IIM N8 N8 N 0 1 N N N N N N -43.521 31.242 21.907 -4.201 1.172 -1.044 N8 A1IIM 26 A1IIM C18 C18 C 0 1 N N N N N N -44.432 31.174 20.770 -4.667 2.404 -1.696 C18 A1IIM 27 A1IIM C19 C19 C 0 1 N N N N N N -45.331 29.971 20.967 -6.034 2.782 -1.116 C19 A1IIM 28 A1IIM C20 C20 C 0 1 N N N N N N -44.514 28.679 21.035 -6.989 1.595 -1.258 C20 A1IIM 29 A1IIM C21 C21 C 0 1 N N R N N N -43.385 28.786 22.057 -6.444 0.401 -0.470 C21 A1IIM 30 A1IIM C22 C22 C 0 1 N N N N N N -42.601 30.103 21.912 -5.082 -0.004 -1.043 C22 A1IIM 31 A1IIM N9 N9 N 0 1 N N N N N N -42.429 27.667 21.958 -7.378 -0.727 -0.580 N9 A1IIM 32 A1IIM C23 C23 C 0 1 N N N N N N -43.046 26.353 22.193 -8.443 -0.629 0.427 C23 A1IIM 33 A1IIM C24 C24 C 0 1 N N N N N N -41.966 25.334 22.363 -9.394 -1.819 0.281 C24 A1IIM 34 A1IIM C25 C25 C 0 1 N N N N N N -41.382 25.155 23.717 -9.484 -2.799 1.453 C25 A1IIM 35 A1IIM C26 C26 C 0 1 N N N N N N -42.232 24.082 23.111 -10.641 -1.839 1.167 C26 A1IIM 36 A1IIM H1 H1 H 0 1 N N N N N N -39.414 41.832 22.931 8.669 -0.188 2.125 H1 A1IIM 37 A1IIM H2 H2 H 0 1 N N N N N N -40.841 42.816 23.402 6.928 -0.041 1.762 H2 A1IIM 38 A1IIM H3 H3 H 0 1 N N N N N N -40.173 41.540 20.746 7.075 2.267 1.410 H3 A1IIM 39 A1IIM H4 H4 H 0 1 N N N N N N -41.027 43.082 21.091 8.552 2.122 2.415 H4 A1IIM 40 A1IIM H5 H5 H 0 1 N N N N N N -43.062 42.001 21.557 8.734 3.117 -0.114 H5 A1IIM 41 A1IIM H6 H6 H 0 1 N N N N N N -42.392 40.901 20.305 9.988 1.977 0.480 H6 A1IIM 42 A1IIM H7 H7 H 0 1 N N N N N N -43.122 40.035 22.799 7.514 1.372 -1.231 H7 A1IIM 43 A1IIM H8 H8 H 0 1 N N N N N N -41.781 39.286 21.867 9.203 0.840 -1.496 H8 A1IIM 44 A1IIM H9 H9 H 0 1 N N N N N N -39.396 41.548 25.053 8.356 -2.246 -1.543 H9 A1IIM 45 A1IIM H10 H10 H 0 1 N N N N N N -40.227 38.604 27.854 4.262 -2.914 -1.827 H10 A1IIM 46 A1IIM H11 H11 H 0 1 N N N N N N -43.408 36.883 24.694 3.705 0.844 1.086 H11 A1IIM 47 A1IIM H12 H12 H 0 1 N N N N N N -45.398 35.185 26.001 1.282 1.996 1.361 H12 A1IIM 48 A1IIM H13 H13 H 0 1 N N N N N N -44.958 34.425 28.310 1.696 0.477 3.276 H13 A1IIM 49 A1IIM H14 H14 H 0 1 N N N N N N -45.580 33.120 27.243 0.065 1.185 3.363 H14 A1IIM 50 A1IIM H15 H15 H 0 1 N N N N N N -43.836 33.179 27.667 0.278 -0.494 2.813 H15 A1IIM 51 A1IIM H16 H16 H 0 1 N N N N N N -42.647 32.725 26.087 -0.358 3.110 0.359 H16 A1IIM 52 A1IIM H17 H17 H 0 1 N N N N N N -42.193 31.228 24.239 -2.539 3.230 -0.691 H17 A1IIM 53 A1IIM H18 H18 H 0 1 N N N N N N -45.245 33.165 21.932 -3.035 -0.987 -0.047 H18 A1IIM 54 A1IIM H19 H19 H 0 1 N N N N N N -43.859 31.064 19.838 -3.955 3.208 -1.509 H19 A1IIM 55 A1IIM H20 H20 H 0 1 N N N N N N -45.039 32.090 20.721 -4.759 2.237 -2.769 H20 A1IIM 56 A1IIM H21 H21 H 0 1 N N N N N N -45.892 30.091 21.906 -5.924 3.036 -0.062 H21 A1IIM 57 A1IIM H22 H22 H 0 1 N N N N N N -46.035 29.907 20.125 -6.434 3.638 -1.658 H22 A1IIM 58 A1IIM H23 H23 H 0 1 N N N N N N -45.178 27.850 21.321 -7.970 1.870 -0.868 H23 A1IIM 59 A1IIM H24 H24 H 0 1 N N N N N N -44.082 28.477 20.044 -7.079 1.325 -2.310 H24 A1IIM 60 A1IIM H25 H25 H 0 1 N N N N N N -43.835 28.773 23.060 -6.330 0.679 0.578 H25 A1IIM 61 A1IIM H26 H26 H 0 1 N N N N N N -42.037 30.088 20.968 -5.211 -0.364 -2.063 H26 A1IIM 62 A1IIM H27 H27 H 0 1 N N N N N N -41.902 30.204 22.755 -4.642 -0.789 -0.428 H27 A1IIM 63 A1IIM H28 H28 H 0 1 N N N N N N -42.030 27.671 21.041 -7.765 -0.787 -1.510 H28 A1IIM 64 A1IIM H30 H30 H 0 1 N N N N N N -43.663 26.392 23.103 -8.002 -0.637 1.424 H30 A1IIM 65 A1IIM H31 H31 H 0 1 N N N N N N -43.677 26.082 21.334 -8.996 0.298 0.282 H31 A1IIM 66 A1IIM H32 H32 H 0 1 N N N N N N -41.260 25.248 21.524 -9.484 -2.228 -0.725 H32 A1IIM 67 A1IIM H33 H33 H 0 1 N N N N N N -40.299 25.000 23.834 -9.634 -3.853 1.217 H33 A1IIM 68 A1IIM H34 H34 H 0 1 N N N N N N -41.761 25.746 24.563 -8.866 -2.596 2.327 H34 A1IIM 69 A1IIM H35 H35 H 0 1 N N N N N N -43.237 23.883 23.512 -10.784 -1.005 1.854 H35 A1IIM 70 A1IIM H36 H36 H 0 1 N N N N N N -41.775 23.137 22.783 -11.552 -2.262 0.743 H36 A1IIM 71 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IIM C18 C19 SING N N 1 A1IIM C18 N8 SING N N 2 A1IIM C19 C20 SING N N 3 A1IIM C20 C21 SING N N 4 A1IIM C3 C2 SING N N 5 A1IIM C3 C4 SING N N 6 A1IIM C2 C1 SING N N 7 A1IIM N8 C22 SING N N 8 A1IIM N8 C15 SING N N 9 A1IIM C22 C21 SING N N 10 A1IIM N9 C21 SING N N 11 A1IIM N9 C23 SING N N 12 A1IIM C23 C24 SING N N 13 A1IIM C4 N1 SING N N 14 A1IIM C24 C26 SING N N 15 A1IIM C24 C25 SING N N 16 A1IIM C1 N1 SING N N 17 A1IIM C16 C15 DOUB N N 18 A1IIM C16 C17 SING N N 19 A1IIM C15 C14 SING N N 20 A1IIM C26 C25 SING N N 21 A1IIM N1 C5 SING N N 22 A1IIM O1 C17 DOUB N N 23 A1IIM C17 N7 SING N N 24 A1IIM C14 C13 DOUB N N 25 A1IIM C5 N3 DOUB Y N 26 A1IIM C5 C6 SING Y N 27 A1IIM N3 C8 SING Y N 28 A1IIM N7 C13 SING N N 29 A1IIM N7 C11 SING N N 30 A1IIM C6 N2 DOUB Y N 31 A1IIM C10 C9 DOUB Y N 32 A1IIM C10 N4 SING Y N 33 A1IIM C8 C9 SING N N 34 A1IIM C8 C7 DOUB Y N 35 A1IIM C11 N4 SING N N 36 A1IIM C11 C12 SING N N 37 A1IIM C9 N6 SING Y N 38 A1IIM N4 N5 SING Y N 39 A1IIM N2 C7 SING Y N 40 A1IIM N6 N5 DOUB Y N 41 A1IIM C1 H1 SING N N 42 A1IIM C1 H2 SING N N 43 A1IIM C2 H3 SING N N 44 A1IIM C2 H4 SING N N 45 A1IIM C3 H5 SING N N 46 A1IIM C3 H6 SING N N 47 A1IIM C4 H7 SING N N 48 A1IIM C4 H8 SING N N 49 A1IIM C6 H9 SING N N 50 A1IIM C7 H10 SING N N 51 A1IIM C10 H11 SING N N 52 A1IIM C11 H12 SING N N 53 A1IIM C12 H13 SING N N 54 A1IIM C12 H14 SING N N 55 A1IIM C12 H15 SING N N 56 A1IIM C13 H16 SING N N 57 A1IIM C14 H17 SING N N 58 A1IIM C16 H18 SING N N 59 A1IIM C18 H19 SING N N 60 A1IIM C18 H20 SING N N 61 A1IIM C19 H21 SING N N 62 A1IIM C19 H22 SING N N 63 A1IIM C20 H23 SING N N 64 A1IIM C20 H24 SING N N 65 A1IIM C21 H25 SING N N 66 A1IIM C22 H26 SING N N 67 A1IIM C22 H27 SING N N 68 A1IIM N9 H28 SING N N 69 A1IIM C23 H30 SING N N 70 A1IIM C23 H31 SING N N 71 A1IIM C24 H32 SING N N 72 A1IIM C25 H33 SING N N 73 A1IIM C25 H34 SING N N 74 A1IIM C26 H35 SING N N 75 A1IIM C26 H36 SING N N 76 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1IIM InChI InChI 1.06 "InChI=1S/C26H35N9O/c1-19(35-18-24(30-31-35)23-15-27-16-25(29-23)32-9-2-3-10-32)34-12-8-22(13-26(34)36)33-11-4-5-21(17-33)28-14-20-6-7-20/h8,12-13,15-16,18-21,28H,2-7,9-11,14,17H2,1H3/t19-,21-/m1/s1" A1IIM InChIKey InChI 1.06 XAKADZHTXYWSEG-TZIWHRDSSA-N A1IIM SMILES_CANONICAL CACTVS 3.385 "C[C@@H](n1cc(nn1)c2cncc(n2)N3CCCC3)N4C=CC(=CC4=O)N5CCC[C@H](C5)NCC6CC6" A1IIM SMILES CACTVS 3.385 "C[CH](n1cc(nn1)c2cncc(n2)N3CCCC3)N4C=CC(=CC4=O)N5CCC[CH](C5)NCC6CC6" A1IIM SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H](n1cc(nn1)c2cncc(n2)N3CCCC3)N4C=CC(=CC4=O)N5CCC[C@H](C5)NCC6CC6" A1IIM SMILES "OpenEye OEToolkits" 2.0.7 "CC(n1cc(nn1)c2cncc(n2)N3CCCC3)N4C=CC(=CC4=O)N5CCCC(C5)NCC6CC6" # _pdbx_chem_comp_identifier.comp_id A1IIM _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "4-[(3~{R})-3-(cyclopropylmethylamino)piperidin-1-yl]-1-[(1~{R})-1-[4-(6-pyrrolidin-1-ylpyrazin-2-yl)-1,2,3-triazol-1-yl]ethyl]pyridin-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1IIM "Create component" 2024-07-17 PDBE A1IIM "Initial release" 2025-02-12 RCSB #