data_A1IIW # _chem_comp.id A1IIW _chem_comp.name "(2~{R},3~{S},4~{R},5~{S},6~{S})-6-(2-chloroethyloxy)-2-(hydroxymethyl)-5-[4-[(imidazolidin-2-ylideneamino)methyl]-1,2,3-triazol-1-yl]oxane-3,4-diol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H23 Cl N6 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-07-24 _chem_comp.pdbx_modified_date 2025-07-25 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 390.823 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1IIW _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9G6W _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1IIW C1 C1 C 0 1 N N N N N N -55.134 11.763 -24.957 -1.566 2.672 -0.282 C1 A1IIW 1 A1IIW O1 O1 O 0 1 N N N N N N -55.088 11.266 -26.286 -2.433 3.115 -1.329 O1 A1IIW 2 A1IIW C7 C2 C 0 1 N N R N N N -54.119 15.324 -23.840 -1.418 -0.645 1.665 C7 A1IIW 3 A1IIW C5 C3 C 0 1 N N N N N N -56.476 15.803 -28.274 -5.726 -0.986 -1.037 C5 A1IIW 4 A1IIW C6 C4 C 0 1 N N S N N N -55.565 15.804 -23.659 -1.169 -1.524 0.435 C6 A1IIW 5 A1IIW C4 C5 C 0 1 N N N N N N -57.010 15.301 -26.997 -4.275 -0.854 -1.503 C4 A1IIW 6 A1IIW O4 O2 O 0 1 N N N N N N -53.305 15.751 -22.750 -0.581 -1.079 2.739 O4 A1IIW 7 A1IIW C3 C6 C 0 1 N N S N N N -56.478 15.151 -24.688 -2.010 -1.003 -0.733 C3 A1IIW 8 A1IIW O3 O3 O 0 1 N N N N N N -56.064 15.572 -25.958 -3.397 -1.102 -0.403 O3 A1IIW 9 A1IIW C2 C7 C 0 1 N N R N N N -55.066 13.269 -24.956 -1.933 1.240 0.112 C2 A1IIW 10 A1IIW O2 O4 O 0 1 N N N N N N -56.373 13.748 -24.592 -1.676 0.363 -0.987 O2 A1IIW 11 A1IIW CL1 CL1 CL 0 0 N N N N N N -54.875 15.119 -28.647 -6.091 0.307 0.166 CL1 A1IIW 12 A1IIW C8 C8 C 0 1 N N S N N N -54.021 13.813 -23.992 -1.089 0.809 1.314 C8 A1IIW 13 A1IIW O5 O5 O 0 1 N N N N N N -52.750 13.484 -24.533 -1.386 1.649 2.432 O5 A1IIW 14 A1IIW N1 N1 N 0 1 Y N N N N N -56.036 15.617 -22.270 0.251 -1.474 0.077 N1 A1IIW 15 A1IIW C9 C9 C 0 1 Y N N N N N -56.097 14.518 -21.471 0.842 -0.529 -0.690 C9 A1IIW 16 A1IIW C10 C10 C 0 1 Y N N N N N -56.596 14.980 -20.293 2.151 -0.867 -0.764 C10 A1IIW 17 A1IIW C11 C11 C 0 1 N N N N N N -56.903 14.270 -19.018 3.233 -0.127 -1.506 C11 A1IIW 18 A1IIW N2 N2 N 0 1 N N N N N N -56.567 15.090 -17.868 3.922 0.782 -0.586 N2 A1IIW 19 A1IIW C12 C12 C 0 1 N N N N N N -57.460 15.784 -17.197 5.179 0.590 -0.299 C12 A1IIW 20 A1IIW N3 N3 N 0 1 N N N N N N -57.252 16.401 -16.039 5.893 1.392 0.548 N3 A1IIW 21 A1IIW C13 C13 C 0 1 N N N N N N -58.513 16.779 -15.422 7.269 0.886 0.642 C13 A1IIW 22 A1IIW C14 C14 C 0 1 N N N N N N -59.544 16.347 -16.454 7.290 -0.349 -0.278 C14 A1IIW 23 A1IIW N4 N4 N 0 1 N N N N N N -58.716 15.947 -17.578 5.923 -0.438 -0.808 N4 A1IIW 24 A1IIW N5 N5 N 0 1 Y N N N N N -56.803 16.320 -20.425 2.294 -1.988 -0.047 N5 A1IIW 25 A1IIW N6 N6 N 0 1 Y N N N N N -56.457 16.707 -21.627 1.151 -2.318 0.442 N6 A1IIW 26 A1IIW H1 H1 H 0 1 N N N N N N -56.073 11.442 -24.483 -0.534 2.701 -0.629 H1 A1IIW 27 A1IIW H2 H2 H 0 1 N N N N N N -54.281 11.361 -24.390 -1.678 3.327 0.582 H2 A1IIW 28 A1IIW H3 H3 H 0 1 N N N N N N -55.132 10.317 -26.271 -2.258 4.017 -1.629 H3 A1IIW 29 A1IIW H4 H4 H 0 1 N N N N N N -53.736 15.776 -24.767 -2.463 -0.722 1.962 H4 A1IIW 30 A1IIW H5 H5 H 0 1 N N N N N N -56.389 16.898 -28.216 -6.393 -0.885 -1.893 H5 A1IIW 31 A1IIW H6 H6 H 0 1 N N N N N N -57.174 15.533 -29.081 -5.872 -1.963 -0.575 H6 A1IIW 32 A1IIW H7 H7 H 0 1 N N N N N N -55.570 16.884 -23.866 -1.452 -2.552 0.659 H7 A1IIW 33 A1IIW H8 H8 H 0 1 N N N N N N -57.961 15.806 -26.771 -4.080 -1.578 -2.294 H8 A1IIW 34 A1IIW H9 H9 H 0 1 N N N N N N -57.179 14.216 -27.069 -4.106 0.153 -1.883 H9 A1IIW 35 A1IIW H10 H10 H 0 1 N N N N N N -53.368 16.694 -22.658 -0.687 -0.565 3.552 H10 A1IIW 36 A1IIW H11 H11 H 0 1 N N N N N N -57.513 15.470 -24.496 -1.804 -1.599 -1.623 H11 A1IIW 37 A1IIW H12 H12 H 0 1 N N N N N N -54.817 13.611 -25.971 -2.990 1.194 0.375 H12 A1IIW 38 A1IIW H13 H13 H 0 1 N N N N N N -54.157 13.341 -23.008 -0.031 0.894 1.065 H13 A1IIW 39 A1IIW H14 H14 H 0 1 N N N N N N -52.067 13.808 -23.958 -1.206 2.587 2.278 H14 A1IIW 40 A1IIW H15 H15 H 0 1 N N N N N N -55.813 13.505 -21.717 0.366 0.324 -1.152 H15 A1IIW 41 A1IIW H16 H16 H 0 1 N N N N N N -57.977 14.033 -18.989 3.948 -0.841 -1.914 H16 A1IIW 42 A1IIW H17 H17 H 0 1 N N N N N N -56.320 13.338 -18.977 2.789 0.447 -2.319 H17 A1IIW 43 A1IIW H18 H18 H 0 1 N N N N N N -56.351 16.581 -15.645 5.546 2.170 1.013 H18 A1IIW 44 A1IIW H19 H19 H 0 1 N N N N N N -58.558 17.864 -15.249 7.975 1.636 0.287 H19 A1IIW 45 A1IIW H20 H20 H 0 1 N N N N N N -58.661 16.249 -14.470 7.501 0.601 1.668 H20 A1IIW 46 A1IIW H21 H21 H 0 1 N N N N N N -60.208 17.181 -16.726 8.007 -0.208 -1.087 H21 A1IIW 47 A1IIW H22 H22 H 0 1 N N N N N N -60.147 15.504 -16.085 7.534 -1.244 0.294 H22 A1IIW 48 A1IIW H23 H23 H 0 1 N N N N N N -59.049 15.813 -18.511 5.601 -1.116 -1.423 H23 A1IIW 49 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IIW CL1 C5 SING N N 1 A1IIW C5 C4 SING N N 2 A1IIW C4 O3 SING N N 3 A1IIW O1 C1 SING N N 4 A1IIW O3 C3 SING N N 5 A1IIW C1 C2 SING N N 6 A1IIW C2 O2 SING N N 7 A1IIW C2 C8 SING N N 8 A1IIW C3 O2 SING N N 9 A1IIW C3 C6 SING N N 10 A1IIW O5 C8 SING N N 11 A1IIW C8 C7 SING N N 12 A1IIW C7 C6 SING N N 13 A1IIW C7 O4 SING N N 14 A1IIW C6 N1 SING N N 15 A1IIW N1 N6 SING Y N 16 A1IIW N1 C9 SING Y N 17 A1IIW N6 N5 DOUB Y N 18 A1IIW C9 C10 DOUB Y N 19 A1IIW N5 C10 SING Y N 20 A1IIW C10 C11 SING N N 21 A1IIW C11 N2 SING N N 22 A1IIW N2 C12 DOUB N N 23 A1IIW N4 C12 SING N N 24 A1IIW N4 C14 SING N N 25 A1IIW C12 N3 SING N N 26 A1IIW C14 C13 SING N N 27 A1IIW N3 C13 SING N N 28 A1IIW C1 H1 SING N N 29 A1IIW C1 H2 SING N N 30 A1IIW O1 H3 SING N N 31 A1IIW C7 H4 SING N N 32 A1IIW C5 H5 SING N N 33 A1IIW C5 H6 SING N N 34 A1IIW C6 H7 SING N N 35 A1IIW C4 H8 SING N N 36 A1IIW C4 H9 SING N N 37 A1IIW O4 H10 SING N N 38 A1IIW C3 H11 SING N N 39 A1IIW C2 H12 SING N N 40 A1IIW C8 H13 SING N N 41 A1IIW O5 H14 SING N N 42 A1IIW C9 H15 SING N N 43 A1IIW C11 H16 SING N N 44 A1IIW C11 H17 SING N N 45 A1IIW N3 H18 SING N N 46 A1IIW C13 H19 SING N N 47 A1IIW C13 H20 SING N N 48 A1IIW C14 H21 SING N N 49 A1IIW C14 H22 SING N N 50 A1IIW N4 H23 SING N N 51 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1IIW InChI InChI 1.06 "InChI=1S/C14H23ClN6O5/c15-1-4-25-13-10(12(24)11(23)9(7-22)26-13)21-6-8(19-20-21)5-18-14-16-2-3-17-14/h6,9-13,22-24H,1-5,7H2,(H2,16,17,18)/t9-,10+,11-,12-,13+/m1/s1" A1IIW InChIKey InChI 1.06 SUTPIBBHKSRFDY-MLGHIDQZSA-N A1IIW SMILES_CANONICAL CACTVS 3.385 "OC[C@H]1O[C@H](OCCCl)[C@H]([C@@H](O)[C@@H]1O)n2cc(CN=C3NCCN3)nn2" A1IIW SMILES CACTVS 3.385 "OC[CH]1O[CH](OCCCl)[CH]([CH](O)[CH]1O)n2cc(CN=C3NCCN3)nn2" A1IIW SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1c(nnn1[C@H]2[C@H]([C@@H]([C@H](O[C@@H]2OCCCl)CO)O)O)CN=C3NCCN3" A1IIW SMILES "OpenEye OEToolkits" 2.0.7 "c1c(nnn1C2C(C(C(OC2OCCCl)CO)O)O)CN=C3NCCN3" # _pdbx_chem_comp_identifier.comp_id A1IIW _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{R},3~{S},4~{R},5~{S},6~{S})-6-(2-chloroethyloxy)-2-(hydroxymethyl)-5-[4-[(imidazolidin-2-ylideneamino)methyl]-1,2,3-triazol-1-yl]oxane-3,4-diol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1IIW "Create component" 2024-07-24 PDBE A1IIW "Initial release" 2025-07-30 RCSB #