data_A1IIY # _chem_comp.id A1IIY _chem_comp.name "4-[7-[[5-(3,4-dichlorophenyl)-1,3,4-oxadiazol-2-yl]methyl]-1,3-dimethyl-2,6-bis(oxidanylidene)purin-8-yl]piperazine-1-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H21 Cl2 N9 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-07-24 _chem_comp.pdbx_modified_date 2026-01-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 534.355 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1IIY _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9G6Y _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1IIY C1 C1 C 0 1 N N N N N N 24.775 -13.886 30.054 6.024 -3.467 0.319 C1 A1IIY 1 A1IIY C10 C2 C 0 1 Y N N N N N 21.558 -15.233 21.588 -5.628 -2.004 -0.553 C10 A1IIY 2 A1IIY C11 C3 C 0 1 Y N N N N N 22.057 -16.506 21.789 -4.929 -3.197 -0.480 C11 A1IIY 3 A1IIY C12 C4 C 0 1 Y N N N N N 23.223 -16.679 22.512 -3.618 -3.207 -0.052 C12 A1IIY 4 A1IIY C13 C5 C 0 1 Y N N N N N 29.638 -15.402 27.111 2.103 0.948 0.030 C13 A1IIY 5 A1IIY C14 C6 C 0 1 N N N N N N 30.500 -16.700 25.153 0.761 2.521 -1.077 C14 A1IIY 6 A1IIY C15 C7 C 0 1 N N N N N N 30.681 -16.109 23.774 -0.498 3.377 -0.898 C15 A1IIY 7 A1IIY C16 C8 C 0 1 N N N N N N 32.047 -14.325 24.708 0.159 3.691 1.519 C16 A1IIY 8 A1IIY C17 C9 C 0 1 N N N N N N 31.869 -14.903 26.094 1.391 2.822 1.245 C17 A1IIY 9 A1IIY C18 C10 C 0 1 N N N N N N 32.914 -15.673 22.823 -0.511 5.601 0.135 C18 A1IIY 10 A1IIY C2 C11 C 0 1 N N N N N N 26.418 -14.244 28.264 4.176 -1.925 0.668 C2 A1IIY 11 A1IIY C29 C12 C 0 1 Y N N N N N 28.533 -15.289 28.939 3.877 -0.013 -0.774 C29 A1IIY 12 A1IIY C3 C13 C 0 1 Y N N N N N 27.715 -14.748 27.979 3.453 -0.773 0.311 C3 A1IIY 13 A1IIY C30 C14 C 0 1 N N N N N N 29.032 -15.957 31.266 5.474 0.364 -2.618 C30 A1IIY 14 A1IIY C31 C15 C 0 1 N N N N N N 26.906 -14.915 30.628 5.668 -1.526 -1.096 C31 A1IIY 15 A1IIY C4 C16 C 0 1 N N N N N N 27.954 -14.356 25.482 1.515 -0.573 1.956 C4 A1IIY 16 A1IIY C5 C17 C 0 1 Y N N N N N 26.906 -15.229 24.876 0.352 -1.401 1.472 C5 A1IIY 17 A1IIY C6 C18 C 0 1 Y N N N N N 25.132 -15.782 23.799 -1.589 -2.016 0.766 C6 A1IIY 18 A1IIY C7 C19 C 0 1 Y N N N N N 23.902 -15.588 23.042 -2.994 -2.011 0.308 C7 A1IIY 19 A1IIY C8 C20 C 0 1 Y N N N N N 23.396 -14.311 22.832 -3.703 -0.811 0.232 C8 A1IIY 20 A1IIY C9 C21 C 0 1 Y N N N N N 22.228 -14.138 22.110 -5.014 -0.813 -0.197 C9 A1IIY 21 A1IIY N1 N1 N 0 1 N N N N N N 26.095 -14.371 29.626 5.267 -2.268 -0.049 N1 A1IIY 22 A1IIY N10 N2 N 0 1 Y N N N N N 29.717 -15.698 28.420 3.032 1.011 -0.902 N10 A1IIY 23 A1IIY N11 N3 N 0 1 N N N N N N 28.145 -15.378 30.255 5.004 -0.417 -1.471 N11 A1IIY 24 A1IIY N2 N4 N 0 1 Y N N N N N 28.419 -14.834 26.783 2.320 -0.144 0.810 N2 A1IIY 25 A1IIY N3 N5 N 0 1 Y N N N N N 25.686 -16.882 24.175 -0.812 -3.067 0.883 N3 A1IIY 26 A1IIY N4 N6 N 0 1 Y N N N N N 26.855 -16.510 24.880 0.344 -2.695 1.309 N4 A1IIY 27 A1IIY N5 N7 N 0 1 N N N N N N 30.615 -15.655 26.174 1.076 1.849 0.191 N5 A1IIY 28 A1IIY N6 N8 N 0 1 N N N N N N 31.947 -15.384 23.706 -0.292 4.276 0.247 N6 A1IIY 29 A1IIY N7 N9 N 0 1 N N N N N N 34.085 -14.983 22.894 -0.216 6.423 1.161 N7 A1IIY 30 A1IIY O1 O1 O 0 1 N N N N N N 25.626 -13.749 27.469 3.823 -2.605 1.615 O1 A1IIY 31 A1IIY O2 O2 O 0 1 Y N N N N N 25.848 -14.690 24.205 -0.864 -0.941 1.134 O2 A1IIY 32 A1IIY O3 O3 O 0 1 N N N N N N 32.753 -16.548 21.972 -0.975 6.055 -0.893 O3 A1IIY 33 A1IIY O4 O4 O 0 1 N N N N N N 26.523 -14.976 31.787 6.655 -1.866 -1.719 O4 A1IIY 34 A1IIY CL1 CL1 CL 0 0 N N N N N N 21.622 -12.536 21.871 -5.898 0.679 -0.292 CL1 A1IIY 35 A1IIY CL2 CL2 CL 0 0 N N N N N N 20.096 -15.036 20.683 -7.275 -1.999 -1.099 CL2 A1IIY 36 A1IIY H1 H1 H 0 1 N N N N N N 24.658 -14.047 31.136 5.623 -4.328 -0.215 H1 A1IIY 37 A1IIY H2 H2 H 0 1 N N N N N N 24.689 -12.812 29.832 7.072 -3.330 0.053 H2 A1IIY 38 A1IIY H3 H3 H 0 1 N N N N N N 23.990 -14.436 29.514 5.940 -3.634 1.393 H3 A1IIY 39 A1IIY H4 H4 H 0 1 N N N N N N 21.539 -17.362 21.383 -5.412 -4.122 -0.758 H4 A1IIY 40 A1IIY H5 H5 H 0 1 N N N N N N 23.611 -17.675 22.667 -3.075 -4.139 0.006 H5 A1IIY 41 A1IIY H6 H6 H 0 1 N N N N N N 29.506 -17.165 25.221 0.585 1.773 -1.850 H6 A1IIY 42 A1IIY H7 H7 H 0 1 N N N N N N 31.274 -17.462 25.325 1.596 3.157 -1.369 H7 A1IIY 43 A1IIY H8 H8 H 0 1 N N N N N N 29.853 -15.417 23.562 -0.671 3.965 -1.799 H8 A1IIY 44 A1IIY H9 H9 H 0 1 N N N N N N 30.683 -16.917 23.028 -1.356 2.732 -0.712 H9 A1IIY 45 A1IIY H10 H10 H 0 1 N N N N N N 33.036 -13.849 24.637 -0.636 3.076 1.942 H10 A1IIY 46 A1IIY H11 H11 H 0 1 N N N N N N 31.264 -13.574 24.523 0.418 4.485 2.219 H11 A1IIY 47 A1IIY H12 H12 H 0 1 N N N N N N 32.710 -15.576 26.317 2.217 3.455 0.921 H12 A1IIY 48 A1IIY H13 H13 H 0 1 N N N N N N 31.849 -14.085 26.829 1.673 2.294 2.156 H13 A1IIY 49 A1IIY H14 H14 H 0 1 N N N N N N 28.535 -15.934 32.247 6.179 1.122 -2.277 H14 A1IIY 50 A1IIY H15 H15 H 0 1 N N N N N N 29.264 -16.998 30.997 5.967 -0.297 -3.331 H15 A1IIY 51 A1IIY H16 H16 H 0 1 N N N N N N 29.964 -15.374 31.313 4.625 0.849 -3.100 H16 A1IIY 52 A1IIY H17 H17 H 0 1 N N N N N N 28.814 -14.314 24.797 1.140 0.303 2.486 H17 A1IIY 53 A1IIY H18 H18 H 0 1 N N N N N N 27.537 -13.346 25.609 2.130 -1.170 2.629 H18 A1IIY 54 A1IIY H19 H19 H 0 1 N N N N N N 23.915 -13.453 23.233 -3.225 0.117 0.509 H19 A1IIY 55 A1IIY H20 H20 H 0 1 N N N N N N 34.824 -15.185 22.251 0.223 6.072 1.952 H20 A1IIY 56 A1IIY H21 H21 H 0 1 N N N N N N 34.206 -14.274 23.589 -0.443 7.364 1.110 H21 A1IIY 57 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IIY CL2 C10 SING N N 1 A1IIY C10 C11 DOUB Y N 2 A1IIY C10 C9 SING Y N 3 A1IIY C11 C12 SING Y N 4 A1IIY CL1 C9 SING N N 5 A1IIY O3 C18 DOUB N N 6 A1IIY C9 C8 DOUB Y N 7 A1IIY C12 C7 DOUB Y N 8 A1IIY C18 N7 SING N N 9 A1IIY C18 N6 SING N N 10 A1IIY C8 C7 SING Y N 11 A1IIY C7 C6 SING N N 12 A1IIY N6 C15 SING N N 13 A1IIY N6 C16 SING N N 14 A1IIY C15 C14 SING N N 15 A1IIY C6 N3 DOUB Y N 16 A1IIY C6 O2 SING Y N 17 A1IIY N3 N4 SING Y N 18 A1IIY O2 C5 SING Y N 19 A1IIY C16 C17 SING N N 20 A1IIY C5 N4 DOUB Y N 21 A1IIY C5 C4 SING N N 22 A1IIY C14 N5 SING N N 23 A1IIY C4 N2 SING N N 24 A1IIY C17 N5 SING N N 25 A1IIY N5 C13 SING N N 26 A1IIY N2 C13 SING Y N 27 A1IIY N2 C3 SING Y N 28 A1IIY C13 N10 DOUB Y N 29 A1IIY O1 C2 DOUB N N 30 A1IIY C3 C2 SING N N 31 A1IIY C3 C29 DOUB Y N 32 A1IIY C2 N1 SING N N 33 A1IIY N10 C29 SING Y N 34 A1IIY C29 N11 SING N N 35 A1IIY N1 C1 SING N N 36 A1IIY N1 C31 SING N N 37 A1IIY N11 C31 SING N N 38 A1IIY N11 C30 SING N N 39 A1IIY C31 O4 DOUB N N 40 A1IIY C1 H1 SING N N 41 A1IIY C1 H2 SING N N 42 A1IIY C1 H3 SING N N 43 A1IIY C11 H4 SING N N 44 A1IIY C12 H5 SING N N 45 A1IIY C14 H6 SING N N 46 A1IIY C14 H7 SING N N 47 A1IIY C15 H8 SING N N 48 A1IIY C15 H9 SING N N 49 A1IIY C16 H10 SING N N 50 A1IIY C16 H11 SING N N 51 A1IIY C17 H12 SING N N 52 A1IIY C17 H13 SING N N 53 A1IIY C30 H14 SING N N 54 A1IIY C30 H15 SING N N 55 A1IIY C30 H16 SING N N 56 A1IIY C4 H17 SING N N 57 A1IIY C4 H18 SING N N 58 A1IIY C8 H19 SING N N 59 A1IIY N7 H20 SING N N 60 A1IIY N7 H21 SING N N 61 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1IIY InChI InChI 1.06 "InChI=1S/C21H21Cl2N9O4/c1-28-16-15(18(33)29(2)21(28)35)32(20(25-16)31-7-5-30(6-8-31)19(24)34)10-14-26-27-17(36-14)11-3-4-12(22)13(23)9-11/h3-4,9H,5-8,10H2,1-2H3,(H2,24,34)" A1IIY InChIKey InChI 1.06 PWPMEZCTVWVTFP-UHFFFAOYSA-N A1IIY SMILES_CANONICAL CACTVS 3.385 "CN1C(=O)N(C)c2nc(N3CCN(CC3)C(N)=O)n(Cc4oc(nn4)c5ccc(Cl)c(Cl)c5)c2C1=O" A1IIY SMILES CACTVS 3.385 "CN1C(=O)N(C)c2nc(N3CCN(CC3)C(N)=O)n(Cc4oc(nn4)c5ccc(Cl)c(Cl)c5)c2C1=O" A1IIY SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN1c2c(n(c(n2)N3CCN(CC3)C(=O)N)Cc4nnc(o4)c5ccc(c(c5)Cl)Cl)C(=O)N(C1=O)C" A1IIY SMILES "OpenEye OEToolkits" 2.0.7 "CN1c2c(n(c(n2)N3CCN(CC3)C(=O)N)Cc4nnc(o4)c5ccc(c(c5)Cl)Cl)C(=O)N(C1=O)C" # _pdbx_chem_comp_identifier.comp_id A1IIY _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "4-[7-[[5-(3,4-dichlorophenyl)-1,3,4-oxadiazol-2-yl]methyl]-1,3-dimethyl-2,6-bis(oxidanylidene)purin-8-yl]piperazine-1-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1IIY "Create component" 2024-07-24 PDBE A1IIY "Initial release" 2026-02-04 RCSB #