data_A1IJ1 # _chem_comp.id A1IJ1 _chem_comp.name "3-[(1S)-1-[4-azanyl-3-(3-fluoranyl-5-oxidanyl-phenyl)pyrazolo[3,4-d]pyrimidin-1-yl]ethyl]-4-(1-methyl-3,6-dihydro-2H-pyridin-4-yl)isochromen-1-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H25 F N6 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-08-03 _chem_comp.pdbx_modified_date 2024-12-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 512.535 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1IJ1 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9GDI _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1IJ1 C2 C1 C 0 1 Y N N N N N 33.126 10.929 29.811 -5.745 -1.144 1.059 C2 A1IJ1 1 A1IJ1 C3 C2 C 0 1 Y N N N N N 34.017 11.658 30.571 -4.468 -0.640 1.231 C3 A1IJ1 2 A1IJ1 C4 C3 C 0 1 Y N N N N N 33.562 12.535 31.565 -3.799 -0.058 0.156 C4 A1IJ1 3 A1IJ1 C5 C4 C 0 1 Y N N N N N 32.193 12.688 31.786 -4.419 0.013 -1.090 C5 A1IJ1 4 A1IJ1 C6 C5 C 0 1 Y N N N N N 31.295 11.939 31.019 -5.697 -0.495 -1.254 C6 A1IJ1 5 A1IJ1 C8 C6 C 0 1 Y N N N N N 31.766 11.061 30.044 -6.359 -1.072 -0.179 C8 A1IJ1 6 A1IJ1 N10 N1 N 0 1 Y N N N N N 35.618 12.604 32.866 -1.442 -0.099 0.974 N10 A1IJ1 7 A1IJ1 C12 C7 C 0 1 Y N N N N N 36.063 14.753 33.296 -0.590 1.857 0.246 C12 A1IJ1 8 A1IJ1 N13 N2 N 0 1 Y N N N N N 36.523 15.948 33.651 0.105 2.946 -0.085 N13 A1IJ1 9 A1IJ1 C16 C8 C 0 1 Y N N N N N 34.187 15.864 32.213 -2.486 2.826 -0.898 C16 A1IJ1 10 A1IJ1 C18 C9 C 0 1 Y N N N N N 34.854 14.668 32.548 -1.934 1.766 -0.161 C18 A1IJ1 11 A1IJ1 C19 C10 C 0 1 N N S N N N 37.729 13.090 34.169 0.988 0.393 1.540 C19 A1IJ1 12 A1IJ1 C21 C11 C 0 1 N N N N N N 38.729 12.919 33.038 1.523 -0.879 0.934 C21 A1IJ1 13 A1IJ1 C23 C12 C 0 1 N N N N N N 38.999 11.883 30.888 0.950 -2.957 0.096 C23 A1IJ1 14 A1IJ1 C27 C13 C 0 1 Y N N N N N 42.456 12.696 29.606 4.012 -4.500 -1.456 C27 A1IJ1 15 A1IJ1 C30 C14 C 0 1 Y N N N N N 40.878 13.198 31.870 3.213 -2.096 -0.329 C30 A1IJ1 16 A1IJ1 C31 C15 C 0 1 N N N N N N 40.002 13.431 33.055 2.716 -0.852 0.285 C31 A1IJ1 17 A1IJ1 C32 C16 C 0 1 N N N N N N 40.550 14.186 34.205 3.498 0.398 0.197 C32 A1IJ1 18 A1IJ1 C33 C17 C 0 1 N N N N N N 41.320 13.547 35.068 3.898 0.973 1.312 C33 A1IJ1 19 A1IJ1 C34 C18 C 0 1 N N N N N N 41.937 14.241 36.254 4.691 2.247 1.337 C34 A1IJ1 20 A1IJ1 C36 C19 C 0 1 N N N N N N 42.580 16.409 37.168 5.952 3.811 -0.015 C36 A1IJ1 21 A1IJ1 C37 C20 C 0 1 N N N N N N 40.664 16.223 35.685 4.248 2.419 -1.030 C37 A1IJ1 22 A1IJ1 C38 C21 C 0 1 N N N N N N 40.251 15.659 34.317 3.811 0.958 -1.162 C38 A1IJ1 23 A1IJ1 F1 F1 F 0 1 N N N N N N 33.592 10.081 28.860 -6.391 -1.713 2.101 F1 A1IJ1 24 A1IJ1 O7 O1 O 0 1 N N N N N N 29.954 12.055 31.209 -6.304 -0.426 -2.468 O7 A1IJ1 25 A1IJ1 C9 C22 C 0 1 Y N N N N N 34.622 13.242 32.313 -2.431 0.484 0.338 C9 A1IJ1 26 A1IJ1 N11 N3 N 0 1 Y N N N N N 36.502 13.488 33.487 -0.306 0.716 0.935 N11 A1IJ1 27 A1IJ1 C14 C23 C 0 1 Y N N N N N 35.860 17.041 33.311 -0.454 3.914 -0.777 C14 A1IJ1 28 A1IJ1 N15 N4 N 0 1 Y N N N N N 34.723 17.021 32.611 -1.712 3.870 -1.179 N15 A1IJ1 29 A1IJ1 N17 N5 N 0 1 N N N N N N 33.015 15.830 31.495 -3.801 2.786 -1.321 N17 A1IJ1 30 A1IJ1 C20 C24 C 0 1 N N N N N N 37.509 11.769 34.913 0.813 0.205 3.049 C20 A1IJ1 31 A1IJ1 O22 O2 O 0 1 N N N N N N 38.260 12.227 31.970 0.808 -2.013 1.055 O22 A1IJ1 32 A1IJ1 O24 O3 O 0 1 N N N N N N 38.517 11.155 30.032 -0.001 -3.594 -0.316 O24 A1IJ1 33 A1IJ1 C25 C25 C 0 1 Y N N N N N 40.374 12.418 30.782 2.309 -3.179 -0.425 C25 A1IJ1 34 A1IJ1 C26 C26 C 0 1 Y N N N N N 41.176 12.185 29.660 2.717 -4.379 -0.996 C26 A1IJ1 35 A1IJ1 C28 C27 C 0 1 Y N N N N N 42.950 13.460 30.650 4.898 -3.440 -1.363 C28 A1IJ1 36 A1IJ1 C29 C28 C 0 1 Y N N N N N 42.180 13.712 31.771 4.513 -2.242 -0.797 C29 A1IJ1 37 A1IJ1 N35 N6 N 0 1 N N N N N N 42.002 15.697 36.022 5.279 2.506 0.016 N35 A1IJ1 38 A1IJ1 H1 H1 H 0 1 N N N N N N 35.078 11.552 30.398 -3.991 -0.696 2.199 H1 A1IJ1 39 A1IJ1 H2 H2 H 0 1 N N N N N N 31.832 13.374 32.538 -3.904 0.463 -1.926 H2 A1IJ1 40 A1IJ1 H3 H3 H 0 1 N N N N N N 31.065 10.478 29.465 -7.355 -1.468 -0.310 H3 A1IJ1 41 A1IJ1 H4 H4 H 0 1 N N N N N N 38.069 13.869 34.868 1.689 1.206 1.355 H4 A1IJ1 42 A1IJ1 H5 H5 H 0 1 N N N N N N 43.077 12.499 28.744 4.335 -5.430 -1.900 H5 A1IJ1 43 A1IJ1 H6 H6 H 0 1 N N N N N N 41.513 12.495 34.918 3.642 0.506 2.252 H6 A1IJ1 44 A1IJ1 H7 H7 H 0 1 N N N N N N 41.327 14.043 37.147 4.036 3.075 1.609 H7 A1IJ1 45 A1IJ1 H8 H8 H 0 1 N N N N N N 42.954 13.853 36.412 5.489 2.161 2.074 H8 A1IJ1 46 A1IJ1 H9 H9 H 0 1 N N N N N N 43.574 15.995 37.394 5.219 4.602 0.150 H9 A1IJ1 47 A1IJ1 H10 H10 H 0 1 N N N N N N 42.674 17.478 36.926 6.709 3.849 0.768 H10 A1IJ1 48 A1IJ1 H11 H11 H 0 1 N N N N N N 41.925 16.288 38.043 6.426 3.952 -0.986 H11 A1IJ1 49 A1IJ1 H12 H12 H 0 1 N N N N N N 40.698 17.322 35.639 4.658 2.768 -1.978 H12 A1IJ1 50 A1IJ1 H13 H13 H 0 1 N N N N N N 39.938 15.910 36.450 3.392 3.035 -0.753 H13 A1IJ1 51 A1IJ1 H14 H14 H 0 1 N N N N N N 40.802 16.195 33.530 4.614 0.379 -1.617 H14 A1IJ1 52 A1IJ1 H15 H15 H 0 1 N N N N N N 39.171 15.814 34.179 2.922 0.901 -1.791 H15 A1IJ1 53 A1IJ1 H16 H16 H 0 1 N N N N N N 29.785 12.685 31.900 -6.140 -1.194 -3.033 H16 A1IJ1 54 A1IJ1 H17 H17 H 0 1 N N N N N N 36.258 17.998 33.615 0.139 4.781 -1.027 H17 A1IJ1 55 A1IJ1 H18 H18 H 0 1 N N N N N N 32.685 16.763 31.350 -4.418 2.151 -0.925 H18 A1IJ1 56 A1IJ1 H19 H19 H 0 1 N N N N N N 33.179 15.394 30.610 -4.107 3.393 -2.013 H19 A1IJ1 57 A1IJ1 H20 H20 H 0 1 N N N N N N 36.782 11.921 35.725 0.112 -0.609 3.234 H20 A1IJ1 58 A1IJ1 H21 H21 H 0 1 N N N N N N 37.123 11.014 34.213 1.776 -0.036 3.499 H21 A1IJ1 59 A1IJ1 H22 H22 H 0 1 N N N N N N 38.464 11.423 35.336 0.426 1.125 3.487 H22 A1IJ1 60 A1IJ1 H23 H23 H 0 1 N N N N N N 40.792 11.604 28.834 2.028 -5.206 -1.079 H23 A1IJ1 61 A1IJ1 H24 H24 H 0 1 N N N N N N 43.950 13.864 30.588 5.908 -3.555 -1.728 H24 A1IJ1 62 A1IJ1 H25 H25 H 0 1 N N N N N N 42.584 14.309 32.576 5.211 -1.421 -0.731 H25 A1IJ1 63 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IJ1 F1 C2 SING N N 1 A1IJ1 C27 C26 DOUB Y N 2 A1IJ1 C27 C28 SING Y N 3 A1IJ1 C26 C25 SING Y N 4 A1IJ1 C2 C8 DOUB Y N 5 A1IJ1 C2 C3 SING Y N 6 A1IJ1 O24 C23 DOUB N N 7 A1IJ1 C8 C6 SING Y N 8 A1IJ1 C3 C4 DOUB Y N 9 A1IJ1 C28 C29 DOUB Y N 10 A1IJ1 C25 C23 SING N N 11 A1IJ1 C25 C30 DOUB Y N 12 A1IJ1 C23 O22 SING N N 13 A1IJ1 C6 O7 SING N N 14 A1IJ1 C6 C5 DOUB Y N 15 A1IJ1 N17 C16 SING N N 16 A1IJ1 C4 C5 SING Y N 17 A1IJ1 C4 C9 SING N N 18 A1IJ1 C29 C30 SING Y N 19 A1IJ1 C30 C31 SING N N 20 A1IJ1 O22 C21 SING N N 21 A1IJ1 C16 C18 SING Y N 22 A1IJ1 C16 N15 DOUB Y N 23 A1IJ1 C9 C18 SING Y N 24 A1IJ1 C9 N10 DOUB Y N 25 A1IJ1 C18 C12 DOUB Y N 26 A1IJ1 N15 C14 SING Y N 27 A1IJ1 N10 N11 SING Y N 28 A1IJ1 C21 C31 DOUB N N 29 A1IJ1 C21 C19 SING N N 30 A1IJ1 C31 C32 SING N N 31 A1IJ1 C12 N11 SING Y N 32 A1IJ1 C12 N13 SING Y N 33 A1IJ1 C14 N13 DOUB Y N 34 A1IJ1 N11 C19 SING N N 35 A1IJ1 C19 C20 SING N N 36 A1IJ1 C32 C38 SING N N 37 A1IJ1 C32 C33 DOUB N N 38 A1IJ1 C38 C37 SING N N 39 A1IJ1 C33 C34 SING N N 40 A1IJ1 C37 N35 SING N N 41 A1IJ1 N35 C34 SING N N 42 A1IJ1 N35 C36 SING N N 43 A1IJ1 C3 H1 SING N N 44 A1IJ1 C5 H2 SING N N 45 A1IJ1 C8 H3 SING N N 46 A1IJ1 C19 H4 SING N N 47 A1IJ1 C27 H5 SING N N 48 A1IJ1 C33 H6 SING N N 49 A1IJ1 C34 H7 SING N N 50 A1IJ1 C34 H8 SING N N 51 A1IJ1 C36 H9 SING N N 52 A1IJ1 C36 H10 SING N N 53 A1IJ1 C36 H11 SING N N 54 A1IJ1 C37 H12 SING N N 55 A1IJ1 C37 H13 SING N N 56 A1IJ1 C38 H14 SING N N 57 A1IJ1 C38 H15 SING N N 58 A1IJ1 O7 H16 SING N N 59 A1IJ1 C14 H17 SING N N 60 A1IJ1 N17 H18 SING N N 61 A1IJ1 N17 H19 SING N N 62 A1IJ1 C20 H20 SING N N 63 A1IJ1 C20 H21 SING N N 64 A1IJ1 C20 H22 SING N N 65 A1IJ1 C26 H23 SING N N 66 A1IJ1 C28 H24 SING N N 67 A1IJ1 C29 H25 SING N N 68 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1IJ1 InChI InChI 1.06 "InChI=1S/C28H25FN6O3/c1-15(25-22(16-7-9-34(2)10-8-16)20-5-3-4-6-21(20)28(37)38-25)35-27-23(26(30)31-14-32-27)24(33-35)17-11-18(29)13-19(36)12-17/h3-7,11-15,36H,8-10H2,1-2H3,(H2,30,31,32)/t15-/m0/s1" A1IJ1 InChIKey InChI 1.06 QKJLXHNKHNDHAP-HNNXBMFYSA-N A1IJ1 SMILES_CANONICAL CACTVS 3.385 "C[C@H](n1nc(c2cc(O)cc(F)c2)c3c(N)ncnc13)C4=C(C5=CCN(C)CC5)c6ccccc6C(=O)O4" A1IJ1 SMILES CACTVS 3.385 "C[CH](n1nc(c2cc(O)cc(F)c2)c3c(N)ncnc13)C4=C(C5=CCN(C)CC5)c6ccccc6C(=O)O4" A1IJ1 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H](C1=C(c2ccccc2C(=O)O1)C3=CCN(CC3)C)n4c5c(c(n4)c6cc(cc(c6)F)O)c(ncn5)N" A1IJ1 SMILES "OpenEye OEToolkits" 2.0.7 "CC(C1=C(c2ccccc2C(=O)O1)C3=CCN(CC3)C)n4c5c(c(n4)c6cc(cc(c6)F)O)c(ncn5)N" # _pdbx_chem_comp_identifier.comp_id A1IJ1 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "3-[(1~{S})-1-[4-azanyl-3-(3-fluoranyl-5-oxidanyl-phenyl)pyrazolo[3,4-d]pyrimidin-1-yl]ethyl]-4-(1-methyl-3,6-dihydro-2~{H}-pyridin-4-yl)isochromen-1-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1IJ1 "Create component" 2024-08-06 PDBE A1IJ1 "Initial release" 2024-12-18 RCSB #