data_A1IJC # _chem_comp.id A1IJC _chem_comp.name "(2~{S})-4-methyl-~{N}-(2-oxidanylidenepropyl)-2-[[(1~{S})-2,2,2-tris(fluoranyl)-1-[4-(4-methylsulfonylphenyl)phenyl]ethyl]amino]pentanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H29 F3 N2 O4 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-07-29 _chem_comp.pdbx_modified_date 2025-07-25 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 498.558 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1IJC _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9G6A _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1IJC C12 C1 C 0 1 Y N N N N N -23.178 18.156 -4.481 -0.497 0.751 0.596 C12 A1IJC 1 A1IJC C13 C2 C 0 1 Y N N N N N -22.053 17.382 -4.200 0.188 0.007 1.540 C13 A1IJC 2 A1IJC C14 C3 C 0 1 Y N N N N N -21.774 16.982 -2.904 1.538 -0.237 1.384 C14 A1IJC 3 A1IJC C16 C4 C 0 1 Y N N N N N -22.290 16.889 -0.460 3.661 0.009 0.100 C16 A1IJC 4 A1IJC C17 C5 C 0 1 Y N N N N N -22.531 17.717 0.636 4.354 -0.744 1.045 C17 A1IJC 5 A1IJC C19 C6 C 0 1 Y N N N N N -21.609 16.068 2.110 6.365 -0.483 -0.229 C19 A1IJC 6 A1IJC C20 C7 C 0 1 N N N N N N -22.655 15.521 4.579 8.904 0.589 0.401 C20 A1IJC 7 A1IJC C21 C8 C 0 1 Y N N N N N -21.364 15.232 1.031 5.682 0.265 -1.170 C21 A1IJC 8 A1IJC C22 C9 C 0 1 Y N N N N N -21.702 15.638 -0.246 4.333 0.514 -1.011 C22 A1IJC 9 A1IJC C23 C10 C 0 1 Y N N N N N -23.741 18.124 -2.122 1.515 1.016 -0.675 C23 A1IJC 10 A1IJC C24 C11 C 0 1 Y N N N N N -24.022 18.529 -3.434 0.166 1.254 -0.509 C24 A1IJC 11 A1IJC C25 C12 C 0 1 N N N N N N -24.435 17.664 -6.627 -2.181 2.413 1.337 C25 A1IJC 12 A1IJC C2 C13 C 0 1 N N N N N N -20.435 22.781 -9.623 -6.475 -5.424 0.360 C2 A1IJC 13 A1IJC C3 C14 C 0 1 N N N N N N -19.644 22.221 -9.013 -6.298 -3.936 0.198 C3 A1IJC 14 A1IJC O O1 O 0 1 N N N N N N -18.525 22.674 -9.040 -7.262 -3.210 0.190 O A1IJC 15 A1IJC C4 C15 C 0 1 N N N N N N -20.040 20.998 -8.223 -4.916 -3.355 0.047 C4 A1IJC 16 A1IJC N N1 N 0 1 N N N N N N -21.484 20.869 -8.174 -5.011 -1.900 -0.093 N A1IJC 17 A1IJC C5 C16 C 0 1 N N N N N N -22.136 21.006 -7.033 -3.892 -1.162 -0.242 C5 A1IJC 18 A1IJC O2 O2 O 0 1 N N N N N N -21.572 21.333 -5.984 -2.807 -1.704 -0.260 O2 A1IJC 19 A1IJC C6 C17 C 0 1 N N S N N N -23.643 20.860 -7.099 -3.990 0.335 -0.386 C6 A1IJC 20 A1IJC C7 C18 C 0 1 N N N N N N -24.398 22.195 -6.950 -4.824 0.674 -1.623 C7 A1IJC 21 A1IJC C8 C19 C 0 1 N N N N N N -25.896 21.980 -6.800 -5.042 2.187 -1.692 C8 A1IJC 22 A1IJC C9 C20 C 0 1 N N N N N N -26.411 23.349 -6.526 -5.736 2.543 -3.008 C9 A1IJC 23 A1IJC C10 C21 C 0 1 N N N N N N -26.600 21.305 -7.992 -5.917 2.630 -0.518 C10 A1IJC 24 A1IJC N2 N2 N 0 1 N N N N N N -23.929 19.984 -5.952 -2.643 0.901 -0.534 N2 A1IJC 25 A1IJC C11 C22 C 0 1 N N S N N N -23.465 18.587 -5.910 -1.972 1.008 0.769 C11 A1IJC 26 A1IJC C15 C23 C 0 1 Y N N N N N -22.613 17.352 -1.848 2.210 0.268 0.273 C15 A1IJC 27 A1IJC C18 C24 C 0 1 Y N N N N N -22.192 17.312 1.916 5.703 -0.986 0.876 C18 A1IJC 28 A1IJC S2 S1 S 0 1 N N N N N N -21.168 15.547 3.735 8.087 -0.796 -0.438 S2 A1IJC 29 A1IJC O3 O3 O 0 1 N N N N N N -20.664 14.206 3.650 8.310 -2.009 0.268 O3 A1IJC 30 A1IJC O4 O4 O 0 1 N N N N N N -20.350 16.568 4.315 8.289 -0.718 -1.842 O4 A1IJC 31 A1IJC F F1 F 0 1 N N N N N N -24.716 18.074 -7.898 -1.441 2.555 2.516 F A1IJC 32 A1IJC F2 F2 F 0 1 N N N N N N -24.005 16.445 -6.627 -1.754 3.363 0.402 F2 A1IJC 33 A1IJC F3 F3 F 0 1 N N N N N N -25.548 17.590 -5.995 -3.539 2.607 1.612 F3 A1IJC 34 A1IJC H1 H1 H 0 1 N N N N N N -21.391 17.091 -5.002 -0.334 -0.383 2.401 H1 A1IJC 35 A1IJC H2 H2 H 0 1 N N N N N N -20.900 16.379 -2.707 2.071 -0.817 2.122 H2 A1IJC 36 A1IJC H3 H3 H 0 1 N N N N N N -22.987 18.684 0.485 3.838 -1.137 1.908 H3 A1IJC 37 A1IJC H4 H4 H 0 1 N N N N N N -22.482 15.203 5.618 8.617 0.597 1.453 H4 A1IJC 38 A1IJC H5 H5 H 0 1 N N N N N N -23.098 16.528 4.572 9.985 0.475 0.321 H5 A1IJC 39 A1IJC H6 H6 H 0 1 N N N N N N -23.342 14.815 4.089 8.601 1.526 -0.066 H6 A1IJC 40 A1IJC H7 H7 H 0 1 N N N N N N -20.910 14.265 1.188 6.204 0.656 -2.030 H7 A1IJC 41 A1IJC H8 H8 H 0 1 N N N N N N -21.511 14.985 -1.085 3.801 1.098 -1.747 H8 A1IJC 42 A1IJC H9 H9 H 0 1 N N N N N N -24.402 18.412 -1.318 2.032 1.410 -1.538 H9 A1IJC 43 A1IJC H10 H10 H 0 1 N N N N N N -24.895 19.132 -3.636 -0.374 1.834 -1.243 H10 A1IJC 44 A1IJC H11 H11 H 0 1 N N N N N N -19.971 23.647 -10.119 -6.450 -5.680 1.419 H11 A1IJC 45 A1IJC H12 H12 H 0 1 N N N N N N -20.857 22.107 -10.382 -7.434 -5.723 -0.063 H12 A1IJC 46 A1IJC H13 H13 H 0 1 N N N N N N -21.236 23.128 -8.954 -5.671 -5.945 -0.159 H13 A1IJC 47 A1IJC H14 H14 H 0 1 N N N N N N -19.613 20.104 -8.702 -4.321 -3.597 0.929 H14 A1IJC 48 A1IJC H15 H15 H 0 1 N N N N N N -19.650 21.087 -7.198 -4.439 -3.775 -0.839 H15 A1IJC 49 A1IJC H16 H16 H 0 1 N N N N N N -21.992 20.674 -9.013 -5.879 -1.467 -0.079 H16 A1IJC 50 A1IJC H17 H17 H 0 1 N N N N N N -23.934 20.373 -8.042 -4.466 0.755 0.500 H17 A1IJC 51 A1IJC H18 H18 H 0 1 N N N N N N -24.022 22.720 -6.059 -4.299 0.342 -2.519 H18 A1IJC 52 A1IJC H19 H19 H 0 1 N N N N N N -24.214 22.810 -7.843 -5.789 0.171 -1.560 H19 A1IJC 53 A1IJC H20 H20 H 0 1 N N N N N N -26.066 21.357 -5.909 -4.079 2.695 -1.640 H20 A1IJC 54 A1IJC H21 H21 H 0 1 N N N N N N -25.873 23.779 -5.668 -6.699 2.035 -3.061 H21 A1IJC 55 A1IJC H22 H22 H 0 1 N N N N N N -26.255 23.983 -7.411 -5.891 3.621 -3.057 H22 A1IJC 56 A1IJC H23 H23 H 0 1 N N N N N N -27.486 23.297 -6.296 -5.112 2.227 -3.845 H23 A1IJC 57 A1IJC H24 H24 H 0 1 N N N N N N -27.673 21.201 -7.774 -5.383 2.462 0.417 H24 A1IJC 58 A1IJC H25 H25 H 0 1 N N N N N N -26.467 21.922 -8.893 -6.150 3.690 -0.618 H25 A1IJC 59 A1IJC H26 H26 H 0 1 N N N N N N -26.162 20.310 -8.161 -6.842 2.053 -0.516 H26 A1IJC 60 A1IJC H27 H27 H 0 1 N N N N N N -23.537 20.435 -5.150 -2.091 0.359 -1.181 H27 A1IJC 61 A1IJC H29 H29 H 0 1 N N N N N N -22.512 18.538 -6.457 -2.391 0.273 1.455 H29 A1IJC 62 A1IJC H30 H30 H 0 1 N N N N N N -22.380 17.961 2.759 6.241 -1.570 1.608 H30 A1IJC 63 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IJC C2 C3 SING N N 1 A1IJC O C3 DOUB N N 2 A1IJC C3 C4 SING N N 3 A1IJC C4 N SING N N 4 A1IJC N C5 SING N N 5 A1IJC C10 C8 SING N N 6 A1IJC F C25 SING N N 7 A1IJC C6 C5 SING N N 8 A1IJC C6 C7 SING N N 9 A1IJC C6 N2 SING N N 10 A1IJC C5 O2 DOUB N N 11 A1IJC C7 C8 SING N N 12 A1IJC C8 C9 SING N N 13 A1IJC F2 C25 SING N N 14 A1IJC C25 F3 SING N N 15 A1IJC C25 C11 SING N N 16 A1IJC N2 C11 SING N N 17 A1IJC C11 C12 SING N N 18 A1IJC C12 C13 DOUB Y N 19 A1IJC C12 C24 SING Y N 20 A1IJC C13 C14 SING Y N 21 A1IJC C24 C23 DOUB Y N 22 A1IJC C14 C15 DOUB Y N 23 A1IJC C23 C15 SING Y N 24 A1IJC C15 C16 SING N N 25 A1IJC C16 C22 DOUB Y N 26 A1IJC C16 C17 SING Y N 27 A1IJC C22 C21 SING Y N 28 A1IJC C17 C18 DOUB Y N 29 A1IJC C21 C19 DOUB Y N 30 A1IJC C18 C19 SING Y N 31 A1IJC C19 S2 SING N N 32 A1IJC O3 S2 DOUB N N 33 A1IJC S2 O4 DOUB N N 34 A1IJC S2 C20 SING N N 35 A1IJC C13 H1 SING N N 36 A1IJC C14 H2 SING N N 37 A1IJC C17 H3 SING N N 38 A1IJC C20 H4 SING N N 39 A1IJC C20 H5 SING N N 40 A1IJC C20 H6 SING N N 41 A1IJC C21 H7 SING N N 42 A1IJC C22 H8 SING N N 43 A1IJC C23 H9 SING N N 44 A1IJC C24 H10 SING N N 45 A1IJC C2 H11 SING N N 46 A1IJC C2 H12 SING N N 47 A1IJC C2 H13 SING N N 48 A1IJC C4 H14 SING N N 49 A1IJC C4 H15 SING N N 50 A1IJC N H16 SING N N 51 A1IJC C6 H17 SING N N 52 A1IJC C7 H18 SING N N 53 A1IJC C7 H19 SING N N 54 A1IJC C8 H20 SING N N 55 A1IJC C9 H21 SING N N 56 A1IJC C9 H22 SING N N 57 A1IJC C9 H23 SING N N 58 A1IJC C10 H24 SING N N 59 A1IJC C10 H25 SING N N 60 A1IJC C10 H26 SING N N 61 A1IJC N2 H27 SING N N 62 A1IJC C11 H29 SING N N 63 A1IJC C18 H30 SING N N 64 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1IJC InChI InChI 1.06 "InChI=1S/C24H29F3N2O4S/c1-15(2)13-21(23(31)28-14-16(3)30)29-22(24(25,26)27)19-7-5-17(6-8-19)18-9-11-20(12-10-18)34(4,32)33/h5-12,15,21-22,29H,13-14H2,1-4H3,(H,28,31)/t21-,22-/m0/s1" A1IJC InChIKey InChI 1.06 NZWQSEGBYPEJET-VXKWHMMOSA-N A1IJC SMILES_CANONICAL CACTVS 3.385 "CC(C)C[C@H](N[C@@H](c1ccc(cc1)c2ccc(cc2)[S](C)(=O)=O)C(F)(F)F)C(=O)NCC(C)=O" A1IJC SMILES CACTVS 3.385 "CC(C)C[CH](N[CH](c1ccc(cc1)c2ccc(cc2)[S](C)(=O)=O)C(F)(F)F)C(=O)NCC(C)=O" A1IJC SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@@H](C(=O)NCC(=O)C)N[C@@H](c1ccc(cc1)c2ccc(cc2)S(=O)(=O)C)C(F)(F)F" A1IJC SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)CC(C(=O)NCC(=O)C)NC(c1ccc(cc1)c2ccc(cc2)S(=O)(=O)C)C(F)(F)F" # _pdbx_chem_comp_identifier.comp_id A1IJC _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S})-4-methyl-~{N}-(2-oxidanylidenepropyl)-2-[[(1~{S})-2,2,2-tris(fluoranyl)-1-[4-(4-methylsulfonylphenyl)phenyl]ethyl]amino]pentanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1IJC "Create component" 2024-07-29 PDBE A1IJC "Modify PCM" 2024-09-27 PDBE A1IJC "Initial release" 2025-07-30 RCSB # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id A1IJC _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C2 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #