data_A1IJW # _chem_comp.id A1IJW _chem_comp.name "(2S)-1-[(2S)-2-[[(1S)-1-[(2S)-1-(4-aminophenyl)carbonylpyrrolidin-2-yl]-2-oxidanyl-2-oxidanylidene-ethyl]amino]propanoyl]pyrrolidine-2-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H28 N4 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-08-03 _chem_comp.pdbx_modified_date 2025-01-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 432.470 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1IJW _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9GBP _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1IJW C12 C1 C 0 1 Y N N N N N 0.981 13.442 26.557 -2.683 0.906 -1.262 C12 A1IJW 1 A1IJW O01 O1 O 0 1 N N N N N N 2.329 16.764 19.812 2.207 -1.009 -0.893 O01 A1IJW 2 A1IJW C02 C2 C 0 1 N N N N N N 1.461 17.440 20.243 2.099 -0.158 -0.036 C02 A1IJW 3 A1IJW C03 C3 C 0 1 N N S N N N 1.503 18.121 21.631 0.885 -0.138 0.857 C03 A1IJW 4 A1IJW N04 N1 N 0 1 N N N N N N 2.475 17.370 22.378 -0.010 -1.244 0.491 N04 A1IJW 5 A1IJW C05 C4 C 0 1 N N S N N N 1.966 16.013 22.764 -1.397 -0.947 0.873 C05 A1IJW 6 A1IJW C06 C5 C 0 1 N N S N N N 2.892 15.519 23.972 -2.353 -1.743 -0.019 C06 A1IJW 7 A1IJW C07 C6 C 0 1 N N N N N N 4.212 14.848 23.424 -2.133 -3.255 0.194 C07 A1IJW 8 A1IJW C08 C7 C 0 1 N N N N N N 3.634 13.408 23.109 -2.290 -3.834 -1.237 C08 A1IJW 9 A1IJW C09 C8 C 0 1 N N N N N N 2.412 13.104 23.827 -1.667 -2.707 -2.098 C09 A1IJW 10 A1IJW N10 N2 N 0 1 N N N N N N 2.292 14.520 24.580 -2.073 -1.456 -1.433 N10 A1IJW 11 A1IJW C11 C9 C 0 1 N N N N N N 1.746 14.604 25.938 -2.172 -0.248 -2.024 C11 A1IJW 12 A1IJW C13 C10 C 0 1 Y N N N N N 1.246 12.894 27.833 -2.696 2.178 -1.842 C13 A1IJW 13 A1IJW C14 C11 C 0 1 Y N N N N N 0.388 11.872 28.295 -3.174 3.253 -1.128 C14 A1IJW 14 A1IJW C15 C12 C 0 1 Y N N N N N -0.698 11.439 27.560 -3.644 3.076 0.170 C15 A1IJW 15 A1IJW N16 N3 N 0 1 N N N N N N -1.464 10.368 28.151 -4.126 4.164 0.889 N16 A1IJW 16 A1IJW C17 C13 C 0 1 Y N N N N N -0.979 11.948 26.254 -3.632 1.810 0.751 C17 A1IJW 17 A1IJW C18 C14 C 0 1 Y N N N N N -0.100 12.940 25.797 -3.160 0.730 0.041 C18 A1IJW 18 A1IJW O19 O2 O 0 1 N N N N N N 1.840 15.681 26.409 -1.839 -0.111 -3.185 O19 A1IJW 19 A1IJW C20 C15 C 0 1 N N N N N N 0.486 16.019 23.168 -1.615 -1.334 2.313 C20 A1IJW 20 A1IJW O21 O3 O 0 1 N N N N N N -0.112 16.748 24.054 -2.839 -1.236 2.856 O21 A1IJW 21 A1IJW O22 O4 O 0 1 N N N N N N -0.288 15.261 22.636 -0.688 -1.731 2.979 O22 A1IJW 22 A1IJW C23 C16 C 0 1 N N N N N N 2.006 19.538 21.383 1.322 -0.297 2.315 C23 A1IJW 23 A1IJW N24 N4 N 0 1 N N N N N N 0.341 17.703 19.371 3.063 0.771 0.118 N24 A1IJW 24 A1IJW C25 C17 C 0 1 N N N N N N -0.929 18.549 19.637 3.060 1.857 1.115 C25 A1IJW 25 A1IJW C26 C18 C 0 1 N N N N N N -1.867 18.184 18.633 3.978 2.950 0.514 C26 A1IJW 26 A1IJW C27 C19 C 0 1 N N N N N N -0.872 17.729 17.374 5.079 2.093 -0.166 C27 A1IJW 27 A1IJW C28 C20 C 0 1 N N S N N N 0.270 17.115 17.965 4.297 0.865 -0.677 C28 A1IJW 28 A1IJW C29 C21 C 0 1 N N N N N N 1.522 17.569 17.236 5.126 -0.381 -0.498 C29 A1IJW 29 A1IJW O30 O5 O 0 1 N N N N N N 2.092 16.823 16.394 4.730 -1.273 0.213 O30 A1IJW 30 A1IJW O31 O6 O 0 1 N N N N N N 1.935 18.725 17.439 6.305 -0.499 -1.130 O31 A1IJW 31 A1IJW H1 H1 H 0 1 N N N N N N 0.509 18.123 22.103 0.360 0.809 0.736 H1 A1IJW 32 A1IJW H2 H2 H 0 1 N N N N N N 3.296 17.259 21.818 0.057 -1.453 -0.494 H2 A1IJW 33 A1IJW H4 H4 H 0 1 N N N N N N 2.103 15.319 21.922 -1.588 0.119 0.750 H4 A1IJW 34 A1IJW H5 H5 H 0 1 N N N N N N 3.140 16.368 24.626 -3.384 -1.479 0.216 H5 A1IJW 35 A1IJW H6 H6 H 0 1 N N N N N N 5.007 14.818 24.184 -1.132 -3.449 0.581 H6 A1IJW 36 A1IJW H7 H7 H 0 1 N N N N N N 4.587 15.350 22.520 -2.889 -3.665 0.864 H7 A1IJW 37 A1IJW H8 H8 H 0 1 N N N N N N 3.429 13.344 22.030 -1.731 -4.764 -1.346 H8 A1IJW 38 A1IJW H9 H9 H 0 1 N N N N N N 4.393 12.661 23.383 -3.341 -3.980 -1.486 H9 A1IJW 39 A1IJW H10 H10 H 0 1 N N N N N N 1.563 12.908 23.155 -0.581 -2.795 -2.110 H10 A1IJW 40 A1IJW H11 H11 H 0 1 N N N N N N 2.529 12.262 24.525 -2.063 -2.743 -3.113 H11 A1IJW 41 A1IJW H12 H12 H 0 1 N N N N N N 2.074 13.244 28.432 -2.332 2.317 -2.849 H12 A1IJW 42 A1IJW H13 H13 H 0 1 N N N N N N 0.587 11.415 29.253 -3.185 4.236 -1.576 H13 A1IJW 43 A1IJW H14 H14 H 0 1 N N N N N N -1.106 10.165 29.062 -4.135 5.046 0.486 H14 A1IJW 44 A1IJW H15 H15 H 0 1 N N N N N N -2.422 10.644 28.223 -4.453 4.041 1.794 H15 A1IJW 45 A1IJW H16 H16 H 0 1 N N N N N N -1.809 11.594 25.661 -3.997 1.676 1.758 H16 A1IJW 46 A1IJW H17 H17 H 0 1 N N N N N N -0.258 13.344 24.808 -3.151 -0.251 0.491 H17 A1IJW 47 A1IJW H18 H18 H 0 1 N N N N N N -1.033 16.518 24.084 -2.915 -1.424 3.802 H18 A1IJW 48 A1IJW H19 H19 H 0 1 N N N N N N 2.060 20.081 22.338 1.847 -1.245 2.435 H19 A1IJW 49 A1IJW H20 H20 H 0 1 N N N N N N 3.007 19.497 20.928 1.986 0.523 2.586 H20 A1IJW 50 A1IJW H21 H21 H 0 1 N N N N N N 1.315 20.059 20.704 0.444 -0.283 2.961 H21 A1IJW 51 A1IJW H22 H22 H 0 1 N N N N N N -0.694 19.621 19.567 2.049 2.243 1.251 H22 A1IJW 52 A1IJW H23 H23 H 0 1 N N N N N N -1.333 18.326 20.635 3.461 1.502 2.064 H23 A1IJW 53 A1IJW H24 H24 H 0 1 N N N N N N -2.503 19.037 18.352 3.441 3.551 -0.221 H24 A1IJW 54 A1IJW H25 H25 H 0 1 N N N N N N -2.501 17.348 18.964 4.400 3.580 1.297 H25 A1IJW 55 A1IJW H26 H26 H 0 1 N N N N N N -0.570 18.611 16.790 5.535 2.632 -0.996 H26 A1IJW 56 A1IJW H27 H27 H 0 1 N N N N N N -1.391 17.015 16.718 5.832 1.795 0.563 H27 A1IJW 57 A1IJW H28 H28 H 0 1 N N N N N N 0.198 16.018 17.994 4.045 0.997 -1.729 H28 A1IJW 58 A1IJW H29 H29 H 0 1 N N N N N N 2.686 18.896 16.883 6.801 -1.316 -0.984 H29 A1IJW 59 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IJW O30 C29 DOUB N N 1 A1IJW C29 O31 SING N N 2 A1IJW C29 C28 SING N N 3 A1IJW C27 C28 SING N N 4 A1IJW C27 C26 SING N N 5 A1IJW C28 N24 SING N N 6 A1IJW C26 C25 SING N N 7 A1IJW N24 C25 SING N N 8 A1IJW N24 C02 SING N N 9 A1IJW O01 C02 DOUB N N 10 A1IJW C02 C03 SING N N 11 A1IJW C23 C03 SING N N 12 A1IJW C03 N04 SING N N 13 A1IJW N04 C05 SING N N 14 A1IJW O22 C20 DOUB N N 15 A1IJW C05 C20 SING N N 16 A1IJW C05 C06 SING N N 17 A1IJW C08 C07 SING N N 18 A1IJW C08 C09 SING N N 19 A1IJW C20 O21 SING N N 20 A1IJW C07 C06 SING N N 21 A1IJW C09 N10 SING N N 22 A1IJW C06 N10 SING N N 23 A1IJW N10 C11 SING N N 24 A1IJW C18 C17 DOUB Y N 25 A1IJW C18 C12 SING Y N 26 A1IJW C11 O19 DOUB N N 27 A1IJW C11 C12 SING N N 28 A1IJW C17 C15 SING Y N 29 A1IJW C12 C13 DOUB Y N 30 A1IJW C15 N16 SING N N 31 A1IJW C15 C14 DOUB Y N 32 A1IJW C13 C14 SING Y N 33 A1IJW C03 H1 SING N N 34 A1IJW N04 H2 SING N N 35 A1IJW C05 H4 SING N N 36 A1IJW C06 H5 SING N N 37 A1IJW C07 H6 SING N N 38 A1IJW C07 H7 SING N N 39 A1IJW C08 H8 SING N N 40 A1IJW C08 H9 SING N N 41 A1IJW C09 H10 SING N N 42 A1IJW C09 H11 SING N N 43 A1IJW C13 H12 SING N N 44 A1IJW C14 H13 SING N N 45 A1IJW N16 H14 SING N N 46 A1IJW N16 H15 SING N N 47 A1IJW C17 H16 SING N N 48 A1IJW C18 H17 SING N N 49 A1IJW O21 H18 SING N N 50 A1IJW C23 H19 SING N N 51 A1IJW C23 H20 SING N N 52 A1IJW C23 H21 SING N N 53 A1IJW C25 H22 SING N N 54 A1IJW C25 H23 SING N N 55 A1IJW C26 H24 SING N N 56 A1IJW C26 H25 SING N N 57 A1IJW C27 H26 SING N N 58 A1IJW C27 H27 SING N N 59 A1IJW C28 H28 SING N N 60 A1IJW O31 H29 SING N N 61 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1IJW InChI InChI 1.06 "InChI=1S/C21H28N4O6/c1-12(18(26)25-11-3-5-16(25)20(28)29)23-17(21(30)31)15-4-2-10-24(15)19(27)13-6-8-14(22)9-7-13/h6-9,12,15-17,23H,2-5,10-11,22H2,1H3,(H,28,29)(H,30,31)/t12-,15-,16-,17-/m0/s1" A1IJW InChIKey InChI 1.06 ISIYJLZCUJDFPZ-STECZYCISA-N A1IJW SMILES_CANONICAL CACTVS 3.385 "C[C@H](N[C@@H]([C@@H]1CCCN1C(=O)c2ccc(N)cc2)C(O)=O)C(=O)N3CCC[C@H]3C(O)=O" A1IJW SMILES CACTVS 3.385 "C[CH](N[CH]([CH]1CCCN1C(=O)c2ccc(N)cc2)C(O)=O)C(=O)N3CCC[CH]3C(O)=O" A1IJW SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H](C(=O)N1CCC[C@H]1C(=O)O)N[C@@H]([C@@H]2CCCN2C(=O)c3ccc(cc3)N)C(=O)O" A1IJW SMILES "OpenEye OEToolkits" 2.0.7 "CC(C(=O)N1CCCC1C(=O)O)NC(C2CCCN2C(=O)c3ccc(cc3)N)C(=O)O" # _pdbx_chem_comp_identifier.comp_id A1IJW _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S})-1-[(2~{S})-2-[[(1~{S})-1-[(2~{S})-1-(4-aminophenyl)carbonylpyrrolidin-2-yl]-2-oxidanyl-2-oxidanylidene-ethyl]amino]propanoyl]pyrrolidine-2-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1IJW "Create component" 2024-08-03 PDBE A1IJW "Initial release" 2025-01-22 RCSB #