data_A1IJY # _chem_comp.id A1IJY _chem_comp.name "(2S)-1-[(2S)-2-[[(1S)-1-[(2S)-1-(4-carboxyphenyl)carbonylpyrrolidin-2-yl]-2-oxidanyl-2-oxidanylidene-ethyl]amino]propanoyl]pyrrolidine-2-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H27 N3 O8" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-08-03 _chem_comp.pdbx_modified_date 2025-01-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 461.465 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1IJY _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9GBL _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1IJY C11 C1 C 0 1 N N N N N N -13.880 -5.221 16.732 1.710 -1.305 2.034 C11 A1IJY 1 A1IJY O01 O1 O 0 1 N N N N N N -11.769 -8.257 21.951 -2.955 -0.891 0.621 O01 A1IJY 2 A1IJY C02 C2 C 0 1 N N N N N N -12.903 -7.981 22.218 -2.581 0.097 0.026 C02 A1IJY 3 A1IJY C03 C3 C 0 1 N N S N N N -14.023 -8.110 21.199 -1.302 0.057 -0.771 C03 A1IJY 4 A1IJY N04 N1 N 0 1 N N N N N N -13.414 -8.154 19.884 -0.702 -1.280 -0.669 N04 A1IJY 5 A1IJY C05 C4 C 0 1 N N S N N N -12.929 -6.915 19.466 0.749 -1.224 -0.892 C05 A1IJY 6 A1IJY C06 C5 C 0 1 N N S N N N -12.618 -6.968 17.925 1.417 -2.413 -0.198 C06 A1IJY 7 A1IJY C07 C6 C 0 1 N N N N N N -11.110 -7.330 17.606 0.744 -3.728 -0.645 C07 A1IJY 8 A1IJY C08 C7 C 0 1 N N N N N N -10.390 -5.909 17.743 0.720 -4.567 0.660 C08 A1IJY 9 A1IJY C09 C8 C 0 1 N N N N N N -11.396 -4.918 17.717 0.474 -3.472 1.729 C09 A1IJY 10 A1IJY N10 N2 N 0 1 N N N N N N -12.734 -5.737 17.454 1.245 -2.303 1.258 N10 A1IJY 11 A1IJY C12 C9 C 0 1 Y N N N N N -13.840 -3.746 16.294 2.580 -0.258 1.452 C12 A1IJY 12 A1IJY C13 C10 C 0 1 Y N N N N N -13.654 -2.724 17.299 3.037 0.792 2.249 C13 A1IJY 13 A1IJY C14 C11 C 0 1 Y N N N N N -13.608 -1.358 16.956 3.847 1.767 1.707 C14 A1IJY 14 A1IJY C15 C12 C 0 1 Y N N N N N -13.791 -1.065 15.553 4.211 1.702 0.361 C15 A1IJY 15 A1IJY C16 C13 C 0 1 N N N N N N -13.878 0.355 14.935 5.081 2.748 -0.221 C16 A1IJY 16 A1IJY O17 O2 O 0 1 N N N N N N -14.206 0.358 13.753 5.478 3.662 0.473 O17 A1IJY 17 A1IJY O18 O3 O 0 1 N N N N N N -13.801 1.470 15.492 5.432 2.686 -1.520 O18 A1IJY 18 A1IJY C19 C14 C 0 1 Y N N N N N -13.998 -2.078 14.565 3.755 0.651 -0.436 C19 A1IJY 19 A1IJY C20 C15 C 0 1 Y N N N N N -13.995 -3.440 14.938 2.949 -0.326 0.108 C20 A1IJY 20 A1IJY O21 O4 O 0 1 N N N N N N -14.853 -5.900 16.507 1.411 -1.261 3.211 O21 A1IJY 21 A1IJY C22 C16 C 0 1 N N N N N N -14.004 -5.881 19.872 1.032 -1.282 -2.371 C22 A1IJY 22 A1IJY O23 O5 O 0 1 N N N N N N -13.667 -4.877 20.580 2.135 -0.698 -2.866 O23 A1IJY 23 A1IJY O24 O6 O 0 1 N N N N N N -15.209 -5.968 19.508 0.266 -1.853 -3.111 O24 A1IJY 24 A1IJY C25 C17 C 0 1 N N N N N N -14.481 -9.572 21.415 -1.606 0.368 -2.238 C25 A1IJY 25 A1IJY N26 N3 N 0 1 N N N N N N -13.265 -7.615 23.526 -3.308 1.230 0.077 N26 A1IJY 26 A1IJY C27 C18 C 0 1 N N N N N N -14.780 -7.311 23.789 -2.971 2.498 -0.595 C27 A1IJY 27 A1IJY C28 C19 C 0 1 N N N N N N -14.803 -6.923 25.162 -3.699 3.590 0.229 C28 A1IJY 28 A1IJY C29 C20 C 0 1 N N N N N N -13.466 -7.336 25.870 -5.020 2.868 0.604 C29 A1IJY 29 A1IJY C30 C21 C 0 1 N N S N N N -12.463 -7.501 24.660 -4.571 1.405 0.808 C30 A1IJY 30 A1IJY C31 C22 C 0 1 N N N N N N -11.698 -8.800 24.992 -5.614 0.465 0.262 C31 A1IJY 31 A1IJY O32 O7 O 0 1 N N N N N N -10.550 -8.888 25.466 -6.850 0.456 0.785 O32 A1IJY 32 A1IJY O33 O8 O 0 1 N N N N N N -12.176 -9.946 24.822 -5.338 -0.280 -0.648 O33 A1IJY 33 A1IJY H1 H1 H 0 1 N N N N N N -14.829 -7.372 21.321 -0.606 0.799 -0.379 H1 A1IJY 34 A1IJY H2 H2 H 0 1 N N N N N N -14.099 -8.466 19.226 -1.142 -1.924 -1.309 H2 A1IJY 35 A1IJY H4 H4 H 0 1 N N N N N N -11.995 -6.670 19.994 1.144 -0.295 -0.482 H4 A1IJY 36 A1IJY H5 H5 H 0 1 N N N N N N -13.284 -7.694 17.436 2.478 -2.437 -0.445 H5 A1IJY 37 A1IJY H6 H6 H 0 1 N N N N N N -11.003 -7.736 16.589 -0.269 -3.541 -1.002 H6 A1IJY 38 A1IJY H7 H7 H 0 1 N N N N N N -10.710 -8.052 18.333 1.339 -4.224 -1.412 H7 A1IJY 39 A1IJY H8 H8 H 0 1 N N N N N N -9.837 -5.858 18.693 -0.097 -5.289 0.645 H8 A1IJY 40 A1IJY H9 H9 H 0 1 N N N N N N -9.693 -5.759 16.905 1.676 -5.064 0.823 H9 A1IJY 41 A1IJY H10 H10 H 0 1 N N N N N N -11.213 -4.196 16.907 -0.587 -3.230 1.786 H10 A1IJY 42 A1IJY H11 H11 H 0 1 N N N N N N -11.446 -4.386 18.678 0.840 -3.802 2.701 H11 A1IJY 43 A1IJY H12 H12 H 0 1 N N N N N N -13.548 -3.013 18.334 2.755 0.842 3.290 H12 A1IJY 44 A1IJY H13 H13 H 0 1 N N N N N N -13.447 -0.583 17.691 4.200 2.580 2.324 H13 A1IJY 45 A1IJY H14 H14 H 0 1 N N N N N N -14.021 2.152 14.868 6.002 3.391 -1.855 H14 A1IJY 46 A1IJY H15 H15 H 0 1 N N N N N N -14.157 -1.801 13.533 4.040 0.599 -1.476 H15 A1IJY 47 A1IJY H16 H16 H 0 1 N N N N N N -14.109 -4.220 14.200 2.596 -1.139 -0.509 H16 A1IJY 48 A1IJY H17 H17 H 0 1 N N N N N N -14.425 -4.324 20.727 2.238 -0.700 -3.828 H17 A1IJY 49 A1IJY H18 H18 H 0 1 N N N N N N -14.966 -9.663 22.398 -2.051 1.361 -2.315 H18 A1IJY 50 A1IJY H19 H19 H 0 1 N N N N N N -15.194 -9.853 20.626 -0.681 0.340 -2.815 H19 A1IJY 51 A1IJY H20 H20 H 0 1 N N N N N N -13.608 -10.240 21.374 -2.302 -0.373 -2.631 H20 A1IJY 52 A1IJY H21 H21 H 0 1 N N N N N N -15.136 -6.495 23.143 -1.894 2.664 -0.577 H21 A1IJY 53 A1IJY H22 H22 H 0 1 N N N N N N -15.396 -8.207 23.622 -3.337 2.492 -1.622 H22 A1IJY 54 A1IJY H23 H23 H 0 1 N N N N N N -14.926 -5.832 25.228 -3.129 3.850 1.121 H23 A1IJY 55 A1IJY H24 H24 H 0 1 N N N N N N -15.647 -7.418 25.664 -3.895 4.473 -0.379 H24 A1IJY 56 A1IJY H25 H25 H 0 1 N N N N N N -13.584 -8.282 26.418 -5.436 3.278 1.524 H25 A1IJY 57 A1IJY H26 H26 H 0 1 N N N N N N -13.126 -6.552 26.562 -5.742 2.938 -0.209 H26 A1IJY 58 A1IJY H27 H27 H 0 1 N N N N N N -11.775 -6.644 24.617 -4.416 1.210 1.869 H27 A1IJY 59 A1IJY H28 H28 H 0 1 N N N N N N -10.323 -9.803 25.580 -7.485 -0.164 0.402 H28 A1IJY 60 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IJY O17 C16 DOUB N N 1 A1IJY C19 C20 DOUB Y N 2 A1IJY C19 C15 SING Y N 3 A1IJY C16 O18 SING N N 4 A1IJY C16 C15 SING N N 5 A1IJY C20 C12 SING Y N 6 A1IJY C15 C14 DOUB Y N 7 A1IJY C12 C11 SING N N 8 A1IJY C12 C13 DOUB Y N 9 A1IJY O21 C11 DOUB N N 10 A1IJY C11 N10 SING N N 11 A1IJY C14 C13 SING Y N 12 A1IJY N10 C09 SING N N 13 A1IJY N10 C06 SING N N 14 A1IJY C07 C08 SING N N 15 A1IJY C07 C06 SING N N 16 A1IJY C09 C08 SING N N 17 A1IJY C06 C05 SING N N 18 A1IJY C05 C22 SING N N 19 A1IJY C05 N04 SING N N 20 A1IJY O24 C22 DOUB N N 21 A1IJY C22 O23 SING N N 22 A1IJY N04 C03 SING N N 23 A1IJY C03 C25 SING N N 24 A1IJY C03 C02 SING N N 25 A1IJY O01 C02 DOUB N N 26 A1IJY C02 N26 SING N N 27 A1IJY N26 C27 SING N N 28 A1IJY N26 C30 SING N N 29 A1IJY C27 C28 SING N N 30 A1IJY C30 C31 SING N N 31 A1IJY C30 C29 SING N N 32 A1IJY O33 C31 DOUB N N 33 A1IJY C31 O32 SING N N 34 A1IJY C28 C29 SING N N 35 A1IJY C03 H1 SING N N 36 A1IJY N04 H2 SING N N 37 A1IJY C05 H4 SING N N 38 A1IJY C06 H5 SING N N 39 A1IJY C07 H6 SING N N 40 A1IJY C07 H7 SING N N 41 A1IJY C08 H8 SING N N 42 A1IJY C08 H9 SING N N 43 A1IJY C09 H10 SING N N 44 A1IJY C09 H11 SING N N 45 A1IJY C13 H12 SING N N 46 A1IJY C14 H13 SING N N 47 A1IJY O18 H14 SING N N 48 A1IJY C19 H15 SING N N 49 A1IJY C20 H16 SING N N 50 A1IJY O23 H17 SING N N 51 A1IJY C25 H18 SING N N 52 A1IJY C25 H19 SING N N 53 A1IJY C25 H20 SING N N 54 A1IJY C27 H21 SING N N 55 A1IJY C27 H22 SING N N 56 A1IJY C28 H23 SING N N 57 A1IJY C28 H24 SING N N 58 A1IJY C29 H25 SING N N 59 A1IJY C29 H26 SING N N 60 A1IJY C30 H27 SING N N 61 A1IJY O32 H28 SING N N 62 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1IJY InChI InChI 1.06 "InChI=1S/C22H27N3O8/c1-12(18(26)25-11-3-5-16(25)21(30)31)23-17(22(32)33)15-4-2-10-24(15)19(27)13-6-8-14(9-7-13)20(28)29/h6-9,12,15-17,23H,2-5,10-11H2,1H3,(H,28,29)(H,30,31)(H,32,33)/t12-,15-,16-,17-/m0/s1" A1IJY InChIKey InChI 1.06 GJBTVPBNLBQCQT-STECZYCISA-N A1IJY SMILES_CANONICAL CACTVS 3.385 "C[C@H](N[C@@H]([C@@H]1CCCN1C(=O)c2ccc(cc2)C(O)=O)C(O)=O)C(=O)N3CCC[C@H]3C(O)=O" A1IJY SMILES CACTVS 3.385 "C[CH](N[CH]([CH]1CCCN1C(=O)c2ccc(cc2)C(O)=O)C(O)=O)C(=O)N3CCC[CH]3C(O)=O" A1IJY SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H](C(=O)N1CCC[C@H]1C(=O)O)N[C@@H]([C@@H]2CCCN2C(=O)c3ccc(cc3)C(=O)O)C(=O)O" A1IJY SMILES "OpenEye OEToolkits" 2.0.7 "CC(C(=O)N1CCCC1C(=O)O)NC(C2CCCN2C(=O)c3ccc(cc3)C(=O)O)C(=O)O" # _pdbx_chem_comp_identifier.comp_id A1IJY _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S})-1-[(2~{S})-2-[[(1~{S})-1-[(2~{S})-1-(4-carboxyphenyl)carbonylpyrrolidin-2-yl]-2-oxidanyl-2-oxidanylidene-ethyl]amino]propanoyl]pyrrolidine-2-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1IJY "Create component" 2024-08-03 PDBE A1IJY "Initial release" 2025-01-22 RCSB #