data_A1IJZ # _chem_comp.id A1IJZ _chem_comp.name "(2S)-1-[(2S)-2-[[(1S)-1-[(2S)-1-[(2S)-2-azanyl-3-phenyl-propanoyl]pyrrolidin-2-yl]-2-oxidanyl-2-oxidanylidene-ethyl]amino]propanoyl]pyrrolidine-2-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H32 N4 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-08-03 _chem_comp.pdbx_modified_date 2025-01-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 460.523 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1IJZ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9GBN _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1IJZ O01 O1 O 0 1 N N N N N N -11.935 -8.593 21.431 1.326 0.978 -1.069 O01 A1IJZ 1 A1IJZ C02 C1 C 0 1 N N N N N N -13.100 -8.388 21.652 2.001 0.754 -0.086 C02 A1IJZ 2 A1IJZ C03 C2 C 0 1 N N S N N N -14.177 -8.555 20.558 2.116 -0.652 0.444 C03 A1IJZ 3 A1IJZ N04 N1 N 0 1 N N N N N N -13.660 -8.581 19.126 1.325 -1.559 -0.398 N04 A1IJZ 4 A1IJZ C05 C3 C 0 1 N N S N N N -13.303 -7.243 18.664 0.917 -2.753 0.354 C05 A1IJZ 5 A1IJZ C06 C4 C 0 1 N N S N N N -12.794 -7.400 17.227 -0.350 -3.341 -0.271 C06 A1IJZ 6 A1IJZ C07 C5 C 0 1 N N N N N N -11.498 -7.749 17.319 -0.086 -3.706 -1.747 C07 A1IJZ 7 A1IJZ C08 C6 C 0 1 N N N N N N -10.856 -6.402 17.776 -1.414 -3.311 -2.446 C08 A1IJZ 8 A1IJZ C09 C7 C 0 1 N N N N N N -11.487 -5.454 16.735 -1.823 -2.049 -1.645 C09 A1IJZ 9 A1IJZ N10 N2 N 0 1 N N N N N N -12.726 -5.958 16.520 -1.426 -2.340 -0.255 N10 A1IJZ 10 A1IJZ C11 C8 C 0 1 N N N N N N -13.732 -5.342 15.691 -1.962 -1.780 0.848 C11 A1IJZ 11 A1IJZ C12 C9 C 0 1 N N S N N N -13.417 -3.949 15.030 -3.134 -0.841 0.723 C12 A1IJZ 12 A1IJZ N13 N3 N 0 1 N N N N N N -13.631 -4.019 13.545 -3.826 -0.747 2.015 N13 A1IJZ 13 A1IJZ C14 C10 C 0 1 N N N N N N -14.252 -3.022 15.871 -2.635 0.545 0.309 C14 A1IJZ 14 A1IJZ C15 C11 C 0 1 Y N N N N N -13.951 -1.558 15.536 -3.813 1.452 0.065 C15 A1IJZ 15 A1IJZ C16 C12 C 0 1 Y N N N N N -15.023 -0.753 15.182 -4.378 1.527 -1.194 C16 A1IJZ 16 A1IJZ C17 C13 C 0 1 Y N N N N N -14.761 0.577 14.771 -5.462 2.355 -1.417 C17 A1IJZ 17 A1IJZ C18 C14 C 0 1 Y N N N N N -13.436 1.080 14.735 -5.983 3.107 -0.380 C18 A1IJZ 18 A1IJZ C19 C15 C 0 1 Y N N N N N -12.325 0.253 15.127 -5.419 3.030 0.879 C19 A1IJZ 19 A1IJZ C20 C16 C 0 1 Y N N N N N -12.598 -1.098 15.538 -4.334 2.203 1.102 C20 A1IJZ 20 A1IJZ O21 O2 O 0 1 N N N N N N -14.813 -5.898 15.574 -1.502 -2.033 1.941 O21 A1IJZ 21 A1IJZ C22 C17 C 0 1 N N N N N N -14.413 -6.218 18.712 2.021 -3.778 0.308 C22 A1IJZ 22 A1IJZ O23 O3 O 0 1 N N N N N N -15.563 -6.283 18.284 2.784 -3.802 -0.629 O23 A1IJZ 23 A1IJZ O24 O4 O 0 1 N N N N N N -14.093 -5.176 19.191 2.157 -4.663 1.307 O24 A1IJZ 24 A1IJZ C25 C18 C 0 1 N N N N N N -14.756 -9.951 20.552 3.583 -1.086 0.423 C25 A1IJZ 25 A1IJZ N26 N4 N 0 1 N N N N N N -13.548 -8.016 23.036 2.652 1.761 0.528 N26 A1IJZ 26 A1IJZ C27 C19 C 0 1 N N N N N N -14.872 -7.755 23.437 3.503 1.631 1.725 C27 A1IJZ 27 A1IJZ C28 C20 C 0 1 N N N N N N -14.837 -7.276 24.940 3.492 3.037 2.375 C28 A1IJZ 28 A1IJZ C29 C21 C 0 1 N N N N N N -13.361 -7.691 25.392 3.495 3.957 1.125 C29 A1IJZ 29 A1IJZ C30 C22 C 0 1 N N S N N N -12.510 -7.866 24.297 2.636 3.171 0.112 C30 A1IJZ 30 A1IJZ C31 C23 C 0 1 N N N N N N -11.675 -9.133 24.413 3.221 3.304 -1.271 C31 A1IJZ 31 A1IJZ O32 O5 O 0 1 N N N N N N -12.141 -10.180 23.935 3.613 2.324 -1.858 O32 A1IJZ 32 A1IJZ O33 O6 O 0 1 N N N N N N -10.534 -9.271 24.989 3.305 4.512 -1.851 O33 A1IJZ 33 A1IJZ H1 H1 H 0 1 N N N N N N -14.968 -7.800 20.676 1.741 -0.686 1.467 H1 A1IJZ 34 A1IJZ H2 H2 H 0 1 N N N N N N -14.372 -8.952 18.530 1.833 -1.813 -1.232 H2 A1IJZ 35 A1IJZ H4 H4 H 0 1 N N N N N N -12.469 -6.870 19.276 0.718 -2.480 1.390 H4 A1IJZ 36 A1IJZ H5 H5 H 0 1 N N N N N N -13.422 -8.090 16.644 -0.658 -4.229 0.281 H5 A1IJZ 37 A1IJZ H6 H6 H 0 1 N N N N N N -11.346 -8.542 18.066 0.746 -3.127 -2.145 H6 A1IJZ 38 A1IJZ H7 H7 H 0 1 N N N N N N -11.099 -8.078 16.348 0.101 -4.775 -1.853 H7 A1IJZ 39 A1IJZ H8 H8 H 0 1 N N N N N N -9.759 -6.423 17.700 -1.247 -3.070 -3.496 H8 A1IJZ 40 A1IJZ H9 H9 H 0 1 N N N N N N -11.147 -6.136 18.803 -2.160 -4.099 -2.342 H9 A1IJZ 41 A1IJZ H10 H10 H 0 1 N N N N N N -10.901 -5.454 15.804 -1.289 -1.174 -2.017 H10 A1IJZ 42 A1IJZ H11 H11 H 0 1 N N N N N N -11.548 -4.429 17.130 -2.899 -1.891 -1.709 H11 A1IJZ 43 A1IJZ H12 H12 H 0 1 N N N N N N -12.356 -3.726 15.218 -3.824 -1.219 -0.032 H12 A1IJZ 44 A1IJZ H13 H13 H 0 1 N N N N N N -13.428 -3.129 13.136 -3.207 -0.398 2.732 H13 A1IJZ 45 A1IJZ H14 H14 H 0 1 N N N N N N -13.025 -4.712 13.153 -4.653 -0.173 1.942 H14 A1IJZ 46 A1IJZ H16 H16 H 0 1 N N N N N N -15.316 -3.223 15.680 -2.016 0.960 1.105 H16 A1IJZ 47 A1IJZ H17 H17 H 0 1 N N N N N N -14.030 -3.201 16.933 -2.045 0.461 -0.604 H17 A1IJZ 48 A1IJZ H18 H18 H 0 1 N N N N N N -16.034 -1.131 15.219 -3.971 0.940 -2.005 H18 A1IJZ 49 A1IJZ H19 H19 H 0 1 N N N N N N -15.582 1.216 14.481 -5.903 2.415 -2.402 H19 A1IJZ 50 A1IJZ H20 H20 H 0 1 N N N N N N -13.258 2.094 14.410 -6.830 3.754 -0.555 H20 A1IJZ 51 A1IJZ H21 H21 H 0 1 N N N N N N -11.315 0.636 15.113 -5.825 3.618 1.689 H21 A1IJZ 52 A1IJZ H22 H22 H 0 1 N N N N N N -11.795 -1.753 15.843 -3.896 2.140 2.087 H22 A1IJZ 53 A1IJZ H23 H23 H 0 1 N N N N N N -14.823 -4.569 19.147 2.836 -5.344 1.201 H23 A1IJZ 54 A1IJZ H24 H24 H 0 1 N N N N N N -15.207 -10.166 21.532 3.958 -1.052 -0.600 H24 A1IJZ 55 A1IJZ H25 H25 H 0 1 N N N N N N -15.526 -10.025 19.770 4.170 -0.413 1.048 H25 A1IJZ 56 A1IJZ H26 H26 H 0 1 N N N N N N -13.956 -10.679 20.349 3.667 -2.103 0.807 H26 A1IJZ 57 A1IJZ H27 H27 H 0 1 N N N N N N -15.306 -6.967 22.804 3.084 0.893 2.409 H27 A1IJZ 58 A1IJZ H28 H28 H 0 1 N N N N N N -15.476 -8.670 23.350 4.518 1.352 1.440 H28 A1IJZ 59 A1IJZ H29 H29 H 0 1 N N N N N N -14.987 -6.189 25.016 2.589 3.187 2.967 H29 A1IJZ 60 A1IJZ H30 H30 H 0 1 N N N N N N -15.599 -7.794 25.541 4.385 3.195 2.979 H30 A1IJZ 61 A1IJZ H31 H31 H 0 1 N N N N N N -13.414 -8.634 25.956 3.040 4.921 1.355 H31 A1IJZ 62 A1IJZ H32 H32 H 0 1 N N N N N N -12.951 -6.900 26.038 4.509 4.092 0.748 H32 A1IJZ 63 A1IJZ H33 H33 H 0 1 N N N N N N -11.863 -6.993 24.125 1.614 3.549 0.120 H33 A1IJZ 64 A1IJZ H34 H34 H 0 1 N N N N N N -10.259 -10.179 24.935 3.687 4.547 -2.738 H34 A1IJZ 65 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IJZ N13 C12 SING N N 1 A1IJZ C18 C17 DOUB Y N 2 A1IJZ C18 C19 SING Y N 3 A1IJZ C17 C16 SING Y N 4 A1IJZ C12 C11 SING N N 5 A1IJZ C12 C14 SING N N 6 A1IJZ C19 C20 DOUB Y N 7 A1IJZ C16 C15 DOUB Y N 8 A1IJZ C15 C20 SING Y N 9 A1IJZ C15 C14 SING N N 10 A1IJZ O21 C11 DOUB N N 11 A1IJZ C11 N10 SING N N 12 A1IJZ N10 C09 SING N N 13 A1IJZ N10 C06 SING N N 14 A1IJZ C09 C08 SING N N 15 A1IJZ C06 C07 SING N N 16 A1IJZ C06 C05 SING N N 17 A1IJZ C07 C08 SING N N 18 A1IJZ O23 C22 DOUB N N 19 A1IJZ C05 C22 SING N N 20 A1IJZ C05 N04 SING N N 21 A1IJZ C22 O24 SING N N 22 A1IJZ N04 C03 SING N N 23 A1IJZ C25 C03 SING N N 24 A1IJZ C03 C02 SING N N 25 A1IJZ O01 C02 DOUB N N 26 A1IJZ C02 N26 SING N N 27 A1IJZ N26 C27 SING N N 28 A1IJZ N26 C30 SING N N 29 A1IJZ C27 C28 SING N N 30 A1IJZ O32 C31 DOUB N N 31 A1IJZ C30 C31 SING N N 32 A1IJZ C30 C29 SING N N 33 A1IJZ C31 O33 SING N N 34 A1IJZ C28 C29 SING N N 35 A1IJZ C03 H1 SING N N 36 A1IJZ N04 H2 SING N N 37 A1IJZ C05 H4 SING N N 38 A1IJZ C06 H5 SING N N 39 A1IJZ C07 H6 SING N N 40 A1IJZ C07 H7 SING N N 41 A1IJZ C08 H8 SING N N 42 A1IJZ C08 H9 SING N N 43 A1IJZ C09 H10 SING N N 44 A1IJZ C09 H11 SING N N 45 A1IJZ C12 H12 SING N N 46 A1IJZ N13 H13 SING N N 47 A1IJZ N13 H14 SING N N 48 A1IJZ C14 H16 SING N N 49 A1IJZ C14 H17 SING N N 50 A1IJZ C16 H18 SING N N 51 A1IJZ C17 H19 SING N N 52 A1IJZ C18 H20 SING N N 53 A1IJZ C19 H21 SING N N 54 A1IJZ C20 H22 SING N N 55 A1IJZ O24 H23 SING N N 56 A1IJZ C25 H24 SING N N 57 A1IJZ C25 H25 SING N N 58 A1IJZ C25 H26 SING N N 59 A1IJZ C27 H27 SING N N 60 A1IJZ C27 H28 SING N N 61 A1IJZ C28 H29 SING N N 62 A1IJZ C28 H30 SING N N 63 A1IJZ C29 H31 SING N N 64 A1IJZ C29 H32 SING N N 65 A1IJZ C30 H33 SING N N 66 A1IJZ O33 H34 SING N N 67 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1IJZ InChI InChI 1.06 "InChI=1S/C23H32N4O6/c1-14(20(28)27-12-6-10-18(27)22(30)31)25-19(23(32)33)17-9-5-11-26(17)21(29)16(24)13-15-7-3-2-4-8-15/h2-4,7-8,14,16-19,25H,5-6,9-13,24H2,1H3,(H,30,31)(H,32,33)/t14-,16-,17-,18-,19-/m0/s1" A1IJZ InChIKey InChI 1.06 NUJBMBAZXCRUTK-GBBGEASQSA-N A1IJZ SMILES_CANONICAL CACTVS 3.385 "C[C@H](N[C@@H]([C@@H]1CCCN1C(=O)[C@@H](N)Cc2ccccc2)C(O)=O)C(=O)N3CCC[C@H]3C(O)=O" A1IJZ SMILES CACTVS 3.385 "C[CH](N[CH]([CH]1CCCN1C(=O)[CH](N)Cc2ccccc2)C(O)=O)C(=O)N3CCC[CH]3C(O)=O" A1IJZ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H](C(=O)N1CCC[C@H]1C(=O)O)N[C@@H]([C@@H]2CCCN2C(=O)[C@H](Cc3ccccc3)N)C(=O)O" A1IJZ SMILES "OpenEye OEToolkits" 2.0.7 "CC(C(=O)N1CCCC1C(=O)O)NC(C2CCCN2C(=O)C(Cc3ccccc3)N)C(=O)O" # _pdbx_chem_comp_identifier.comp_id A1IJZ _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S})-1-[(2~{S})-2-[[(1~{S})-1-[(2~{S})-1-[(2~{S})-2-azanyl-3-phenyl-propanoyl]pyrrolidin-2-yl]-2-oxidanyl-2-oxidanylidene-ethyl]amino]propanoyl]pyrrolidine-2-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1IJZ "Create component" 2024-08-03 PDBE A1IJZ "Initial release" 2025-01-22 RCSB #