data_A1IKD # _chem_comp.id A1IKD _chem_comp.name "N',N'-dimethyl-N-(6-naphthalen-1-yl-5-pyridin-4-yl-pyridazin-3-yl)ethane-1,2-diamine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H23 N5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "N1,N1-dimethyl-N2-(6-(naphthalen-1-yl)-5-(pyridin-4-yl)pyridazin-3-yl)ethane-1,2-diamine" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-08-06 _chem_comp.pdbx_modified_date 2025-08-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 369.462 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1IKD _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9GCR _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1IKD C01 C1 C 0 1 N N N N N N -19.634 -36.106 -24.189 -6.766 -0.815 0.457 C01 A1IKD 1 A1IKD C03 C2 C 0 1 N N N N N N -21.254 -37.487 -25.274 -7.931 0.947 -0.726 C03 A1IKD 2 A1IKD C04 C3 C 0 1 N N N N N N -21.578 -36.767 -22.901 -5.622 1.254 -0.067 C04 A1IKD 3 A1IKD C05 C4 C 0 1 N N N N N N -22.436 -38.032 -22.979 -4.243 0.591 -0.087 C05 A1IKD 4 A1IKD C07 C5 C 0 1 Y N N N N N -20.632 -39.805 -22.673 -1.894 1.178 0.413 C07 A1IKD 5 A1IKD C08 C6 C 0 1 Y N N N N N -20.448 -41.219 -22.609 -1.518 -0.118 0.065 C08 A1IKD 6 A1IKD C09 C7 C 0 1 Y N N N N N -19.205 -41.778 -22.890 -0.166 -0.449 0.145 C09 A1IKD 7 A1IKD C10 C8 C 0 1 Y N N N N N -19.037 -43.249 -22.843 0.314 -1.807 -0.208 C10 A1IKD 8 A1IKD C11 C9 C 0 1 Y N N N N N -19.692 -44.076 -23.766 1.304 -1.989 -1.179 C11 A1IKD 9 A1IKD C12 C10 C 0 1 Y N N N N N -19.485 -45.454 -23.697 1.720 -3.270 -1.477 C12 A1IKD 10 A1IKD C14 C11 C 0 1 Y N N N N N -18.054 -45.233 -21.895 0.267 -4.184 0.065 C14 A1IKD 11 A1IKD C15 C12 C 0 1 Y N N N N N -18.199 -43.835 -21.894 -0.208 -2.940 0.424 C15 A1IKD 12 A1IKD C16 C13 C 0 1 Y N N N N N -18.113 -40.895 -23.267 0.731 0.553 0.572 C16 A1IKD 13 A1IKD C17 C14 C 0 1 Y N N N N N -16.721 -41.399 -23.568 2.177 0.262 0.675 C17 A1IKD 14 A1IKD C18 C15 C 0 1 Y N N N N N -16.475 -42.434 -24.450 2.621 -0.836 1.393 C18 A1IKD 15 A1IKD C19 C16 C 0 1 Y N N N N N -15.150 -42.901 -24.695 3.979 -1.115 1.495 C19 A1IKD 16 A1IKD C20 C17 C 0 1 Y N N N N N -14.071 -42.335 -24.066 4.908 -0.322 0.894 C20 A1IKD 17 A1IKD C21 C18 C 0 1 Y N N N N N -14.273 -41.256 -23.141 4.503 0.803 0.155 C21 A1IKD 18 A1IKD C22 C19 C 0 1 Y N N N N N -13.168 -40.627 -22.454 5.443 1.638 -0.474 C22 A1IKD 19 A1IKD C23 C20 C 0 1 Y N N N N N -13.348 -39.584 -21.563 5.016 2.719 -1.183 C23 A1IKD 20 A1IKD C24 C21 C 0 1 Y N N N N N -14.643 -39.100 -21.300 3.658 3.013 -1.293 C24 A1IKD 21 A1IKD C25 C22 C 0 1 Y N N N N N -15.724 -39.685 -21.939 2.721 2.225 -0.696 C25 A1IKD 22 A1IKD C26 C23 C 0 1 Y N N N N N -15.570 -40.794 -22.888 3.124 1.100 0.037 C26 A1IKD 23 A1IKD N02 N1 N 0 1 N N N N N N -21.091 -36.369 -24.281 -6.637 0.287 -0.505 N02 A1IKD 24 A1IKD N06 N2 N 0 1 N N N N N N -21.858 -39.205 -22.375 -3.231 1.555 0.350 N06 A1IKD 25 A1IKD N13 N3 N 0 1 Y N N N N N -18.678 -46.051 -22.777 1.198 -4.313 -0.860 N13 A1IKD 26 A1IKD N27 N4 N 0 1 Y N N N N N -18.371 -39.517 -23.297 0.269 1.758 0.880 N27 A1IKD 27 A1IKD N28 N5 N 0 1 Y N N N N N -19.500 -39.009 -23.029 -0.978 2.051 0.809 N28 A1IKD 28 A1IKD H012 H1 H 0 0 N N N N N N -19.452 -35.292 -23.472 -7.472 -1.551 0.074 H012 A1IKD 29 A1IKD H013 H2 H 0 0 N N N N N N -19.118 -37.016 -23.849 -5.793 -1.286 0.602 H013 A1IKD 30 A1IKD H011 H3 H 0 0 N N N N N N -19.251 -35.816 -25.178 -7.126 -0.426 1.409 H011 A1IKD 31 A1IKD H031 H4 H 0 0 N N N N N N -22.322 -37.727 -25.384 -7.823 1.713 -1.494 H031 A1IKD 32 A1IKD H033 H5 H 0 0 N N N N N N -20.846 -37.176 -26.247 -8.665 0.209 -1.050 H033 A1IKD 33 A1IKD H032 H6 H 0 0 N N N N N N -20.713 -38.376 -24.917 -8.267 1.409 0.203 H032 A1IKD 34 A1IKD H041 H7 H 0 0 N N N N N N -20.710 -36.958 -22.252 -5.850 1.586 0.946 H041 A1IKD 35 A1IKD H042 H8 H 0 0 N N N N N N -22.179 -35.948 -22.479 -5.622 2.112 -0.739 H042 A1IKD 36 A1IKD H052 H9 H 0 0 N N N N N N -23.392 -37.826 -22.475 -4.243 -0.267 0.585 H052 A1IKD 37 A1IKD H051 H10 H 0 0 N N N N N N -22.621 -38.252 -24.041 -4.015 0.259 -1.100 H051 A1IKD 38 A1IKD H081 H11 H 0 0 N N N N N N -21.277 -41.858 -22.341 -2.252 -0.844 -0.255 H081 A1IKD 39 A1IKD H111 H12 H 0 0 N N N N N N -20.345 -43.654 -24.516 1.735 -1.140 -1.688 H111 A1IKD 40 A1IKD H121 H13 H 0 0 N N N N N N -19.993 -46.082 -24.413 2.484 -3.421 -2.226 H121 A1IKD 41 A1IKD H141 H14 H 0 0 N N N N N N -17.410 -45.680 -21.152 -0.133 -5.066 0.544 H141 A1IKD 42 A1IKD H151 H15 H 0 0 N N N N N N -17.672 -43.227 -21.173 -0.970 -2.842 1.183 H151 A1IKD 43 A1IKD H181 H16 H 0 0 N N N N N N -17.303 -42.899 -24.964 1.904 -1.482 1.879 H181 A1IKD 44 A1IKD H191 H17 H 0 0 N N N N N N -14.994 -43.715 -25.388 4.302 -1.977 2.060 H191 A1IKD 45 A1IKD H201 H18 H 0 0 N N N N N N -13.074 -42.699 -24.266 5.958 -0.557 0.986 H201 A1IKD 46 A1IKD H221 H19 H 0 0 N N N N N N -12.166 -40.984 -22.643 6.498 1.423 -0.396 H221 A1IKD 47 A1IKD H231 H20 H 0 0 N N N N N N -12.495 -39.142 -21.070 5.740 3.359 -1.665 H231 A1IKD 48 A1IKD H241 H21 H 0 0 N N N N N N -14.792 -38.283 -20.609 3.345 3.877 -1.860 H241 A1IKD 49 A1IKD H251 H22 H 0 0 N N N N N N -16.716 -39.312 -21.731 1.672 2.465 -0.790 H251 A1IKD 50 A1IKD H061 H24 H 0 0 N N N N N N -21.805 -38.989 -21.400 -3.493 2.456 0.596 H061 A1IKD 51 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IKD N02 C01 SING N N 1 A1IKD C03 N02 SING N N 2 A1IKD C04 N02 SING N N 3 A1IKD C05 C04 SING N N 4 A1IKD N06 C05 SING N N 5 A1IKD C07 N06 SING N N 6 A1IKD C08 C07 SING Y N 7 A1IKD C09 C08 DOUB Y N 8 A1IKD C11 C10 DOUB Y N 9 A1IKD C12 C11 SING Y N 10 A1IKD N13 C12 DOUB Y N 11 A1IKD C14 N13 SING Y N 12 A1IKD C15 C14 DOUB Y N 13 A1IKD C10 C09 SING N N 14 A1IKD C16 C09 SING Y N 15 A1IKD C18 C17 DOUB Y N 16 A1IKD C19 C18 SING Y N 17 A1IKD C20 C19 DOUB Y N 18 A1IKD C21 C20 SING Y N 19 A1IKD C22 C21 SING Y N 20 A1IKD C23 C22 DOUB Y N 21 A1IKD C24 C23 SING Y N 22 A1IKD C25 C24 DOUB Y N 23 A1IKD C26 C25 SING Y N 24 A1IKD C17 C16 SING N N 25 A1IKD N27 C16 DOUB Y N 26 A1IKD N28 N27 SING Y N 27 A1IKD C07 N28 DOUB Y N 28 A1IKD C10 C15 SING Y N 29 A1IKD C17 C26 SING Y N 30 A1IKD C21 C26 DOUB Y N 31 A1IKD C01 H012 SING N N 32 A1IKD C01 H013 SING N N 33 A1IKD C01 H011 SING N N 34 A1IKD C03 H031 SING N N 35 A1IKD C03 H033 SING N N 36 A1IKD C03 H032 SING N N 37 A1IKD C04 H041 SING N N 38 A1IKD C04 H042 SING N N 39 A1IKD C05 H052 SING N N 40 A1IKD C05 H051 SING N N 41 A1IKD C08 H081 SING N N 42 A1IKD C11 H111 SING N N 43 A1IKD C12 H121 SING N N 44 A1IKD C14 H141 SING N N 45 A1IKD C15 H151 SING N N 46 A1IKD C18 H181 SING N N 47 A1IKD C19 H191 SING N N 48 A1IKD C20 H201 SING N N 49 A1IKD C22 H221 SING N N 50 A1IKD C23 H231 SING N N 51 A1IKD C24 H241 SING N N 52 A1IKD C25 H251 SING N N 53 A1IKD N06 H061 SING N N 54 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1IKD InChI InChI 1.06 "InChI=1S/C23H23N5/c1-28(2)15-14-25-22-16-21(18-10-12-24-13-11-18)23(27-26-22)20-9-5-7-17-6-3-4-8-19(17)20/h3-13,16H,14-15H2,1-2H3,(H,25,26)" A1IKD InChIKey InChI 1.06 UMAGLYLWSTVWQA-UHFFFAOYSA-N A1IKD SMILES_CANONICAL CACTVS 3.385 "CN(C)CCNc1cc(c2ccncc2)c(nn1)c3cccc4ccccc34" A1IKD SMILES CACTVS 3.385 "CN(C)CCNc1cc(c2ccncc2)c(nn1)c3cccc4ccccc34" A1IKD SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN(C)CCNc1cc(c(nn1)c2cccc3c2cccc3)c4ccncc4" A1IKD SMILES "OpenEye OEToolkits" 2.0.7 "CN(C)CCNc1cc(c(nn1)c2cccc3c2cccc3)c4ccncc4" # _pdbx_chem_comp_identifier.comp_id A1IKD _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}',~{N}'-dimethyl-~{N}-(6-naphthalen-1-yl-5-pyridin-4-yl-pyridazin-3-yl)ethane-1,2-diamine" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id A1IKD _pdbx_chem_comp_synonyms.name "N1,N1-dimethyl-N2-(6-(naphthalen-1-yl)-5-(pyridin-4-yl)pyridazin-3-yl)ethane-1,2-diamine" _pdbx_chem_comp_synonyms.provenance AUTHOR _pdbx_chem_comp_synonyms.type ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1IKD "Create component" 2024-08-06 PDBE A1IKD "Initial release" 2025-08-13 RCSB #