data_A1IL6 # _chem_comp.id A1IL6 _chem_comp.name "(2~{S},4~{S})-4-hexylsulfanylpyrrolidine-2-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H21 N O2 S" _chem_comp.mon_nstd_parent_comp_id PRO _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-08-20 _chem_comp.pdbx_modified_date 2025-07-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 231.355 _chem_comp.one_letter_code P _chem_comp.three_letter_code A1IL6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9GFK _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1IL6 C17 C1 C 0 1 N N N N N N 9.104 -17.826 41.765 7.730 -0.019 -0.586 C17 A1IL6 1 A1IL6 C18 C2 C 0 1 N N N N N N 8.292 -16.559 41.524 6.477 -0.532 0.125 C18 A1IL6 2 A1IL6 C19 C3 C 0 1 N N N N N N 8.766 -15.734 40.336 5.253 0.233 -0.383 C19 A1IL6 3 A1IL6 C20 C4 C 0 1 N N N N N N 7.817 -15.749 39.136 3.999 -0.281 0.328 C20 A1IL6 4 A1IL6 C21 C5 C 0 1 N N N N N N 8.435 -15.160 37.873 2.775 0.484 -0.180 C21 A1IL6 5 A1IL6 C22 C6 C 0 1 N N N N N N 7.455 -14.880 36.740 1.522 -0.030 0.531 C22 A1IL6 6 A1IL6 CD C7 C 0 1 N N N N N N 8.493 -16.173 34.156 -1.490 -1.332 0.463 C24 A1IL6 7 A1IL6 CA C8 C 0 1 N N S N Y N 7.199 -14.834 32.590 -3.635 -0.338 0.490 C26 A1IL6 8 A1IL6 O O1 O 0 1 N N N N Y Y 6.682 -12.906 31.270 -4.845 -0.344 -1.532 O11 A1IL6 9 A1IL6 N N1 N 0 1 N N N Y Y N 8.511 -15.415 32.905 -2.848 -1.444 -0.112 N5 A1IL6 10 A1IL6 C C9 C 0 1 N N N N Y Y 7.286 -13.349 32.253 -4.821 0.003 -0.375 C27 A1IL6 11 A1IL6 CB C10 C 0 1 N N N N N N 6.372 -15.094 33.857 -2.626 0.838 0.522 C25 A1IL6 12 A1IL6 CG C11 C 0 1 N N S N N N 7.001 -16.368 34.407 -1.292 0.139 0.871 C23 A1IL6 13 A1IL6 S1 S1 S 0 1 N N N N N N 6.716 -16.430 36.168 0.071 0.877 -0.072 S1 A1IL6 14 A1IL6 H1 H1 H 0 1 N N N N N N 8.699 -18.362 42.636 7.627 -0.171 -1.661 H1 A1IL6 15 A1IL6 H2 H2 H 0 1 N N N N N N 9.046 -18.473 40.877 7.855 1.044 -0.380 H2 A1IL6 16 A1IL6 H3 H3 H 0 1 N Y N N N N 10.154 -17.558 41.955 8.602 -0.563 -0.224 H3 A1IL6 17 A1IL6 H4 H4 H 0 1 N N N N N N 8.353 -15.933 42.426 6.352 -1.595 -0.081 H4 A1IL6 18 A1IL6 H5 H5 H 0 1 N N N N N N 7.245 -16.848 41.348 6.580 -0.380 1.199 H5 A1IL6 19 A1IL6 H6 H6 H 0 1 N N N N N N 9.739 -16.129 40.010 5.378 1.296 -0.177 H6 A1IL6 20 A1IL6 H7 H7 H 0 1 N N N N N N 8.885 -14.692 40.667 5.149 0.080 -1.458 H7 A1IL6 21 A1IL6 H8 H8 H 0 1 N N N N N N 6.921 -15.165 39.392 3.874 -1.344 0.122 H8 A1IL6 22 A1IL6 H9 H9 H 0 1 N N N N N N 7.529 -16.791 38.931 4.103 -0.129 1.402 H9 A1IL6 23 A1IL6 H10 H10 H 0 1 N N N N N N 9.191 -15.868 37.502 2.900 1.547 0.025 H10 A1IL6 24 A1IL6 H11 H11 H 0 1 N N N N N N 8.923 -14.212 38.143 2.672 0.332 -1.255 H11 A1IL6 25 A1IL6 H12 H12 H 0 1 N N N N N N 7.989 -14.401 35.906 1.397 -1.093 0.325 H12 A1IL6 26 A1IL6 H13 H13 H 0 1 N N N N N N 6.662 -14.209 37.101 1.625 0.123 1.605 H13 A1IL6 27 A1IL6 HD2 H14 H 0 1 N N N N N N 9.006 -17.139 34.042 -1.403 -1.975 1.339 H14 A1IL6 28 A1IL6 HD3 H15 H 0 1 N N N N N N 8.962 -15.603 34.972 -0.744 -1.615 -0.280 H15 A1IL6 29 A1IL6 HA H16 H 0 1 N N N N Y N 6.743 -15.371 31.746 -3.955 -0.598 1.499 H16 A1IL6 30 A1IL6 H H17 H 0 1 N Y N Y Y N 8.779 -16.027 32.161 -3.259 -2.340 0.104 H17 A1IL6 31 A1IL6 HB2 H20 H 0 1 N N N N N N 6.468 -14.263 34.571 -2.565 1.321 -0.453 H20 A1IL6 32 A1IL6 HB3 H21 H 0 1 N N N N N N 5.310 -15.248 33.614 -2.898 1.558 1.294 H21 A1IL6 33 A1IL6 HG2 H22 H 0 1 N N N N N N 6.603 -17.280 33.939 -1.096 0.212 1.941 H22 A1IL6 34 A1IL6 OXT O2 O 0 1 N Y N N Y Y 8.056 -12.602 33.030 -5.852 0.692 0.140 O1 A1IL6 35 A1IL6 HXT H18 H 0 1 N Y N N Y Y 8.058 -11.708 32.709 -6.590 0.887 -0.453 H18 A1IL6 36 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IL6 O C DOUB N N 1 A1IL6 C CA SING N N 2 A1IL6 CA N SING N N 3 A1IL6 CA CB SING N N 4 A1IL6 N CD SING N N 5 A1IL6 CB CG SING N N 6 A1IL6 CD CG SING N N 7 A1IL6 CG S1 SING N N 8 A1IL6 S1 C22 SING N N 9 A1IL6 C22 C21 SING N N 10 A1IL6 C21 C20 SING N N 11 A1IL6 C20 C19 SING N N 12 A1IL6 C19 C18 SING N N 13 A1IL6 C18 C17 SING N N 14 A1IL6 C17 H1 SING N N 15 A1IL6 C17 H2 SING N N 16 A1IL6 C17 H3 SING N N 17 A1IL6 C18 H4 SING N N 18 A1IL6 C18 H5 SING N N 19 A1IL6 C19 H6 SING N N 20 A1IL6 C19 H7 SING N N 21 A1IL6 C20 H8 SING N N 22 A1IL6 C20 H9 SING N N 23 A1IL6 C21 H10 SING N N 24 A1IL6 C21 H11 SING N N 25 A1IL6 C22 H12 SING N N 26 A1IL6 C22 H13 SING N N 27 A1IL6 CD HD2 SING N N 28 A1IL6 CD HD3 SING N N 29 A1IL6 CA HA SING N N 30 A1IL6 N H SING N N 31 A1IL6 CB HB2 SING N N 32 A1IL6 CB HB3 SING N N 33 A1IL6 CG HG2 SING N N 34 A1IL6 C OXT SING N N 35 A1IL6 OXT HXT SING N N 36 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1IL6 InChI InChI 1.06 "InChI=1S/C11H21NO2S/c1-2-3-4-5-6-15-9-7-10(11(13)14)12-8-9/h9-10,12H,2-8H2,1H3,(H,13,14)/t9-,10-/m0/s1" A1IL6 InChIKey InChI 1.06 QCQBCBKPDHRDPT-UWVGGRQHSA-N A1IL6 SMILES_CANONICAL CACTVS 3.385 "CCCCCCS[C@@H]1CN[C@@H](C1)C(O)=O" A1IL6 SMILES CACTVS 3.385 "CCCCCCS[CH]1CN[CH](C1)C(O)=O" A1IL6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCCCS[C@H]1C[C@H](NC1)C(=O)O" A1IL6 SMILES "OpenEye OEToolkits" 2.0.7 "CCCCCCSC1CC(NC1)C(=O)O" # _pdbx_chem_comp_identifier.comp_id A1IL6 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S},4~{S})-4-hexylsulfanylpyrrolidine-2-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1IL6 "Create component" 2024-08-20 PDBE A1IL6 "Modify PCM" 2024-09-27 PDBE A1IL6 "Initial release" 2025-03-26 RCSB A1IL6 "Modify parent residue" 2025-07-23 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id A1IL6 _pdbx_chem_comp_pcm.modified_residue_id PRO _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Non-standard residue" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom ? _pdbx_chem_comp_pcm.modified_residue_id_linking_atom ? _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #