data_A1IL9 # _chem_comp.id A1IL9 _chem_comp.name "2-chloranyl-4-[[4-[(9S)-4,5,13-trimethyl-9-[2-[(2-methylpropan-2-yl)oxy]-2-oxidanylidene-ethyl]-3-thia-1,8,11,12-tetrazatricyclo[8.3.0.0^{2,6}]trideca-2(6),4,7,10,12-pentaen-7-yl]phenyl]carbamoyl]benzenesulfinic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C30 H30 Cl N5 O5 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-08-20 _chem_comp.pdbx_modified_date 2026-04-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 640.173 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1IL9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9RSD _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1IL9 C8 C1 C 0 1 Y N N N N N 164.743 104.505 154.567 -1.272 -0.035 0.731 C8 A1IL9 1 A1IL9 O1 O1 O 0 1 N N N N N N 169.008 106.432 156.164 -5.477 2.981 -0.969 O1 A1IL9 2 A1IL9 C11 C2 C 0 1 Y N N N N N 167.329 102.074 153.465 -4.299 -2.025 -0.206 C11 A1IL9 3 A1IL9 C10 C3 C 0 1 Y N N N N N 166.701 103.344 153.398 -3.256 -1.138 -0.367 C10 A1IL9 4 A1IL9 C1 C4 C 0 1 Y N N N N N 156.004 106.265 154.711 7.316 -0.463 -0.732 C1 A1IL9 5 A1IL9 C2 C5 C 0 1 Y N N N N N 157.167 105.662 154.294 5.944 -0.573 -0.848 C2 A1IL9 6 A1IL9 C3 C6 C 0 1 Y N N N N N 158.392 106.269 154.540 5.116 0.060 0.080 C3 A1IL9 7 A1IL9 C4 C7 C 0 1 N N N N N N 159.653 105.599 154.079 3.647 -0.054 -0.038 C4 A1IL9 8 A1IL9 C5 C8 C 0 1 Y N N N N N 162.098 105.418 154.663 1.469 0.360 0.817 C5 A1IL9 9 A1IL9 C6 C9 C 0 1 Y N N N N N 162.480 104.453 153.732 0.607 1.399 1.151 C6 A1IL9 10 A1IL9 C7 C10 C 0 1 Y N N N N N 163.784 104.007 153.688 -0.756 1.206 1.108 C7 A1IL9 11 A1IL9 C12 C11 C 0 1 Y N N N N N 167.142 102.861 151.133 -3.276 -2.098 -2.487 C12 A1IL9 12 A1IL9 C13 C12 C 0 1 N N N N N N 167.215 102.920 149.637 -2.890 -2.364 -3.919 C13 A1IL9 13 A1IL9 C14 C13 C 0 1 Y N N N N N 166.775 103.811 152.015 -2.707 -1.190 -1.711 C14 A1IL9 14 A1IL9 C15 C14 C 0 1 N N N N N N 166.469 105.211 151.605 -1.595 -0.289 -2.181 C15 A1IL9 15 A1IL9 C16 C15 C 0 1 Y N N N N N 167.828 100.134 155.006 -5.626 -3.247 1.501 C16 A1IL9 16 A1IL9 C17 C16 C 0 1 N N N N N N 167.426 98.993 154.148 -5.564 -4.649 0.952 C17 A1IL9 17 A1IL9 C18 C17 C 0 1 Y N N N N N 168.204 102.194 155.700 -5.355 -1.109 1.792 C18 A1IL9 18 A1IL9 C19 C18 C 0 1 N N S N N N 168.269 103.684 155.655 -4.908 0.316 1.597 C19 A1IL9 19 A1IL9 C20 C19 C 0 1 N N N N N N 168.933 104.221 156.925 -5.446 0.843 0.266 C20 A1IL9 20 A1IL9 C21 C20 C 0 1 N N N N N N 168.598 105.663 157.180 -5.103 2.304 0.128 C21 A1IL9 21 A1IL9 C22 C21 C 0 1 N N N N N N 169.020 107.911 156.232 -5.112 4.385 -1.033 C22 A1IL9 22 A1IL9 C23 C22 C 0 1 N N N N N N 169.828 108.337 157.437 -5.620 4.984 -2.346 C23 A1IL9 23 A1IL9 C24 C23 C 0 1 N N N N N N 169.676 108.380 154.954 -5.742 5.131 0.145 C24 A1IL9 24 A1IL9 C25 C24 C 0 1 N N N N N N 167.590 108.395 156.316 -3.590 4.520 -0.967 C25 A1IL9 25 A1IL9 C26 C25 C 0 1 Y N N N N N 164.354 105.470 155.490 -0.405 -1.077 0.398 C26 A1IL9 26 A1IL9 C27 C26 C 0 1 Y N N N N N 163.053 105.922 155.543 0.958 -0.878 0.441 C27 A1IL9 27 A1IL9 C28 C27 C 0 1 Y N N N N N 158.427 107.489 155.202 5.681 0.801 1.120 C28 A1IL9 28 A1IL9 C29 C28 C 0 1 Y N N N N N 157.259 108.097 155.620 7.052 0.904 1.224 C29 A1IL9 29 A1IL9 C30 C29 C 0 1 Y N N N N N 156.030 107.486 155.374 7.869 0.273 0.302 C30 A1IL9 30 A1IL9 C9 C30 C 0 1 N N N N N N 166.153 104.028 154.521 -2.736 -0.248 0.691 C9 A1IL9 31 A1IL9 N1 N1 N 0 1 N N N N N N 160.776 105.923 154.764 2.849 0.559 0.860 N1 A1IL9 32 A1IL9 N2 N2 N 0 1 Y N N N N N 167.753 101.461 154.639 -5.053 -2.142 0.964 N2 A1IL9 33 A1IL9 N3 N3 N 0 1 Y N N N N N 168.297 100.057 156.221 -6.243 -2.860 2.589 N3 A1IL9 34 A1IL9 N4 N4 N 0 1 Y N N N N N 168.544 101.358 156.678 -6.082 -1.593 2.758 N4 A1IL9 35 A1IL9 N5 N5 N 0 1 N N N N N N 166.929 104.257 155.532 -3.444 0.363 1.587 N5 A1IL9 36 A1IL9 O2 O2 O 0 1 N N N N N N 168.027 106.026 158.177 -4.490 2.866 1.005 O2 A1IL9 37 A1IL9 O3 O3 O 0 1 N N N N N N 159.636 104.817 153.136 3.158 -0.700 -0.944 O3 A1IL9 38 A1IL9 O4 O4 O 0 1 N N N N N N 154.126 109.080 154.631 9.926 -0.491 1.500 O4 A1IL9 39 A1IL9 O5 O5 O 0 1 N N N N N N 154.857 109.231 156.927 9.806 1.773 1.092 O5 A1IL9 40 A1IL9 S1 S1 S 0 1 Y N N N N N 167.595 101.384 151.904 -4.534 -2.954 -1.617 S1 A1IL9 41 A1IL9 S2 S2 S 0 1 N N N N N N 154.495 108.252 155.911 9.620 0.409 0.444 S2 A1IL9 42 A1IL9 CL1 CL1 CL 0 0 N N N N N N 154.490 105.489 154.400 8.349 -1.257 -1.879 CL1 A1IL9 43 A1IL9 H1 H1 H 0 1 N N N N N N 157.128 104.716 153.775 5.514 -1.148 -1.655 H1 A1IL9 44 A1IL9 H2 H2 H 0 1 N N N N N N 161.751 104.053 153.042 1.007 2.359 1.442 H2 A1IL9 45 A1IL9 H3 H3 H 0 1 N N N N N N 164.066 103.260 152.961 -1.425 2.013 1.367 H3 A1IL9 46 A1IL9 H4 H4 H 0 1 N N N N N N 167.567 101.953 149.248 -3.512 -3.165 -4.320 H4 A1IL9 47 A1IL9 H5 H5 H 0 1 N N N N N N 166.217 103.137 149.230 -3.037 -1.460 -4.509 H5 A1IL9 48 A1IL9 H6 H6 H 0 1 N N N N N N 167.915 103.713 149.335 -1.842 -2.661 -3.964 H6 A1IL9 49 A1IL9 H7 H7 H 0 1 N N N N N N 165.399 105.298 151.365 -2.019 0.581 -2.683 H7 A1IL9 50 A1IL9 H8 H8 H 0 1 N N N N N N 166.717 105.897 152.429 -1.006 0.038 -1.324 H8 A1IL9 51 A1IL9 H9 H9 H 0 1 N N N N N N 167.065 105.472 150.718 -0.955 -0.833 -2.875 H9 A1IL9 52 A1IL9 H10 H10 H 0 1 N N N N N N 167.583 98.051 154.693 -6.402 -4.810 0.274 H10 A1IL9 53 A1IL9 H11 H11 H 0 1 N N N N N N 166.363 99.091 153.883 -4.628 -4.787 0.412 H11 A1IL9 54 A1IL9 H12 H12 H 0 1 N N N N N N 168.034 98.992 153.231 -5.619 -5.363 1.773 H12 A1IL9 55 A1IL9 H13 H13 H 0 1 N N N N N N 168.876 103.989 154.790 -5.287 0.932 2.413 H13 A1IL9 56 A1IL9 H14 H14 H 0 1 N N N N N N 168.592 103.622 157.782 -4.996 0.285 -0.555 H14 A1IL9 57 A1IL9 H15 H15 H 0 1 N N N N N N 170.024 104.125 156.821 -6.529 0.720 0.237 H15 A1IL9 58 A1IL9 H16 H16 H 0 1 N N N N N N 169.333 107.986 158.354 -6.705 4.888 -2.394 H16 A1IL9 59 A1IL9 H17 H17 H 0 1 N N N N N N 170.836 107.901 157.375 -5.346 6.038 -2.395 H17 A1IL9 60 A1IL9 H18 H18 H 0 1 N N N N N N 169.903 109.434 157.459 -5.172 4.453 -3.186 H18 A1IL9 61 A1IL9 H19 H19 H 0 1 N N N N N N 169.716 109.479 154.944 -5.380 4.704 1.080 H19 A1IL9 62 A1IL9 H20 H20 H 0 1 N N N N N N 170.697 107.976 154.897 -5.468 6.184 0.097 H20 A1IL9 63 A1IL9 H21 H21 H 0 1 N N N N N N 169.093 108.026 154.091 -6.827 5.035 0.098 H21 A1IL9 64 A1IL9 H22 H22 H 0 1 N N N N N N 167.137 108.041 157.254 -3.141 3.989 -1.806 H22 A1IL9 65 A1IL9 H23 H23 H 0 1 N N N N N N 167.573 109.495 156.294 -3.316 5.574 -1.015 H23 A1IL9 66 A1IL9 H24 H24 H 0 1 N N N N N N 167.019 108.002 155.462 -3.227 4.093 -0.032 H24 A1IL9 67 A1IL9 H25 H25 H 0 1 N N N N N N 165.084 105.872 156.177 -0.802 -2.038 0.106 H25 A1IL9 68 A1IL9 H26 H26 H 0 1 N N N N N N 162.773 106.670 156.270 1.629 -1.683 0.183 H26 A1IL9 69 A1IL9 H27 H27 H 0 1 N N N N N N 159.376 107.967 155.392 5.045 1.294 1.840 H27 A1IL9 70 A1IL9 H28 H28 H 0 1 N N N N N N 157.298 109.045 156.137 7.490 1.477 2.028 H28 A1IL9 71 A1IL9 H29 H29 H 0 1 N N N N N N 160.653 106.636 155.455 3.235 1.138 1.535 H29 A1IL9 72 A1IL9 H31 H31 H 0 1 N N N N N N 154.780 110.106 156.566 10.731 2.013 1.245 H31 A1IL9 73 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IL9 C13 C12 SING N N 1 A1IL9 C12 S1 SING Y N 2 A1IL9 C12 C14 DOUB Y N 3 A1IL9 C15 C14 SING N N 4 A1IL9 S1 C11 SING Y N 5 A1IL9 C14 C10 SING Y N 6 A1IL9 O3 C4 DOUB N N 7 A1IL9 C10 C11 DOUB Y N 8 A1IL9 C10 C9 SING N N 9 A1IL9 C11 N2 SING N N 10 A1IL9 C7 C6 DOUB Y N 11 A1IL9 C7 C8 SING Y N 12 A1IL9 C6 C5 SING Y N 13 A1IL9 C4 C3 SING N N 14 A1IL9 C4 N1 SING N N 15 A1IL9 C17 C16 SING N N 16 A1IL9 C2 C3 DOUB Y N 17 A1IL9 C2 C1 SING Y N 18 A1IL9 CL1 C1 SING N N 19 A1IL9 C9 C8 SING N N 20 A1IL9 C9 N5 DOUB N N 21 A1IL9 C3 C28 SING Y N 22 A1IL9 C8 C26 DOUB Y N 23 A1IL9 O4 S2 DOUB N N 24 A1IL9 N2 C16 SING Y N 25 A1IL9 N2 C18 SING Y N 26 A1IL9 C5 N1 SING N N 27 A1IL9 C5 C27 DOUB Y N 28 A1IL9 C1 C30 DOUB Y N 29 A1IL9 C24 C22 SING N N 30 A1IL9 C16 N3 DOUB Y N 31 A1IL9 C28 C29 DOUB Y N 32 A1IL9 C30 C29 SING Y N 33 A1IL9 C30 S2 SING N N 34 A1IL9 C26 C27 SING Y N 35 A1IL9 N5 C19 SING N N 36 A1IL9 C19 C18 SING N N 37 A1IL9 C19 C20 SING N N 38 A1IL9 C18 N4 DOUB Y N 39 A1IL9 S2 O5 SING N N 40 A1IL9 O1 C22 SING N N 41 A1IL9 O1 C21 SING N N 42 A1IL9 N3 N4 SING Y N 43 A1IL9 C22 C25 SING N N 44 A1IL9 C22 C23 SING N N 45 A1IL9 C20 C21 SING N N 46 A1IL9 C21 O2 DOUB N N 47 A1IL9 C2 H1 SING N N 48 A1IL9 C6 H2 SING N N 49 A1IL9 C7 H3 SING N N 50 A1IL9 C13 H4 SING N N 51 A1IL9 C13 H5 SING N N 52 A1IL9 C13 H6 SING N N 53 A1IL9 C15 H7 SING N N 54 A1IL9 C15 H8 SING N N 55 A1IL9 C15 H9 SING N N 56 A1IL9 C17 H10 SING N N 57 A1IL9 C17 H11 SING N N 58 A1IL9 C17 H12 SING N N 59 A1IL9 C19 H13 SING N N 60 A1IL9 C20 H14 SING N N 61 A1IL9 C20 H15 SING N N 62 A1IL9 C23 H16 SING N N 63 A1IL9 C23 H17 SING N N 64 A1IL9 C23 H18 SING N N 65 A1IL9 C24 H19 SING N N 66 A1IL9 C24 H20 SING N N 67 A1IL9 C24 H21 SING N N 68 A1IL9 C25 H22 SING N N 69 A1IL9 C25 H23 SING N N 70 A1IL9 C25 H24 SING N N 71 A1IL9 C26 H25 SING N N 72 A1IL9 C27 H26 SING N N 73 A1IL9 C28 H27 SING N N 74 A1IL9 C29 H28 SING N N 75 A1IL9 N1 H29 SING N N 76 A1IL9 O5 H31 SING N N 77 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1IL9 InChI InChI 1.06 "InChI=1S/C30H30ClN5O5S2/c1-15-16(2)42-29-25(15)26(33-22(14-24(37)41-30(4,5)6)27-35-34-17(3)36(27)29)18-7-10-20(11-8-18)32-28(38)19-9-12-23(43(39)40)21(31)13-19/h7-13,22H,14H2,1-6H3,(H,32,38)(H,39,40)/t22-/m0/s1" A1IL9 InChIKey InChI 1.06 HUHIHKHTLHUPGQ-QFIPXVFZSA-N A1IL9 SMILES_CANONICAL CACTVS 3.385 "Cc1sc2n3c(C)nnc3[C@H](CC(=O)OC(C)(C)C)N=C(c4ccc(NC(=O)c5ccc(c(Cl)c5)[S](O)=O)cc4)c2c1C" A1IL9 SMILES CACTVS 3.385 "Cc1sc2n3c(C)nnc3[CH](CC(=O)OC(C)(C)C)N=C(c4ccc(NC(=O)c5ccc(c(Cl)c5)[S](O)=O)cc4)c2c1C" A1IL9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(sc-2c1C(=N[C@H](c3n2c(nn3)C)CC(=O)OC(C)(C)C)c4ccc(cc4)NC(=O)c5ccc(c(c5)Cl)S(=O)O)C" A1IL9 SMILES "OpenEye OEToolkits" 2.0.7 "Cc1c(sc-2c1C(=NC(c3n2c(nn3)C)CC(=O)OC(C)(C)C)c4ccc(cc4)NC(=O)c5ccc(c(c5)Cl)S(=O)O)C" # _pdbx_chem_comp_identifier.comp_id A1IL9 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-chloranyl-4-[[4-[(9~{S})-4,5,13-trimethyl-9-[2-[(2-methylpropan-2-yl)oxy]-2-oxidanylidene-ethyl]-3-thia-1,8,11,12-tetrazatricyclo[8.3.0.0^{2,6}]trideca-2(6),4,7,10,12-pentaen-7-yl]phenyl]carbamoyl]benzenesulfinic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1IL9 "Create component" 2024-08-20 PDBE A1IL9 "Modify model coordinates code" 2025-07-07 PDBE A1IL9 "Modify parent residue" 2026-01-28 PDBE A1IL9 "Initial release" 2026-04-08 RCSB #