data_A1IMP # _chem_comp.id A1IMP _chem_comp.name "7-[(4-chlorophenyl)methyl]-3-methyl-1-(3-oxidanylpropyl)-8-(1,1,3,3-tetramethyl-2-oxidanyl-isoindol-5-yl)oxy-purine-2,6-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H32 Cl N5 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-08-27 _chem_comp.pdbx_modified_date 2025-09-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 554.037 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1IMP _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9GL6 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1IMP C02 C1 C 0 1 N N N N N N 181.611 174.113 118.664 3.505 0.601 -0.187 C02 A1IMP 1 A1IMP C03 C2 C 0 1 Y N N N N N 181.950 174.092 120.075 2.124 0.574 -0.452 C03 A1IMP 2 A1IMP C04 C3 C 0 1 Y N N N N N 181.409 175.017 121.011 1.302 1.533 0.131 C04 A1IMP 3 A1IMP C06 C4 C 0 1 Y N N N N N 182.749 173.684 122.144 0.039 0.243 -1.073 C06 A1IMP 4 A1IMP C08 C5 C 0 1 Y N N N N N 184.379 173.869 123.857 -2.269 0.265 -1.340 C08 A1IMP 5 A1IMP C09 C6 C 0 1 Y N N N N N 185.406 174.485 123.152 -2.655 1.482 -1.883 C09 A1IMP 6 A1IMP C10 C7 C 0 1 Y N N N N N 186.344 175.263 123.828 -3.883 2.023 -1.559 C10 A1IMP 7 A1IMP C11 C8 C 0 1 Y N N N N N 186.231 175.410 125.195 -4.729 1.355 -0.694 C11 A1IMP 8 A1IMP C12 C9 C 0 1 N N N N N N 187.145 176.203 126.081 -6.105 1.696 -0.167 C12 A1IMP 9 A1IMP C13 C10 C 0 1 N N N N N N 188.611 175.873 125.835 -6.167 3.172 0.231 C13 A1IMP 10 A1IMP C14 C11 C 0 1 N N N N N N 186.912 177.713 125.928 -7.167 1.388 -1.225 C14 A1IMP 11 A1IMP C17 C12 C 0 1 N N N N N N 185.303 175.112 127.381 -5.460 -0.349 0.748 C17 A1IMP 12 A1IMP C18 C13 C 0 1 N N N N N N 184.268 176.165 127.797 -6.279 -1.426 0.034 C18 A1IMP 13 A1IMP C19 C14 C 0 1 N N N N N N 185.212 173.910 128.309 -4.885 -0.902 2.053 C19 A1IMP 14 A1IMP C20 C15 C 0 1 Y N N N N N 185.196 174.789 125.909 -4.346 0.140 -0.150 C20 A1IMP 15 A1IMP C21 C16 C 0 1 Y N N N N N 184.254 174.009 125.251 -3.119 -0.405 -0.472 C21 A1IMP 16 A1IMP C23 C17 C 0 1 N N N N N N 183.613 172.106 120.299 1.705 -1.389 -2.020 C23 A1IMP 17 A1IMP C24 C18 C 0 1 Y N N N N N 184.968 172.519 119.783 1.646 -2.637 -1.176 C24 A1IMP 18 A1IMP C25 C19 C 0 1 Y N N N N N 185.121 172.955 118.467 2.756 -3.034 -0.453 C25 A1IMP 19 A1IMP C26 C20 C 0 1 Y N N N N N 186.375 173.336 117.997 2.703 -4.178 0.321 C26 A1IMP 20 A1IMP C27 C21 C 0 1 Y N N N N N 187.454 173.271 118.863 1.540 -4.925 0.371 C27 A1IMP 21 A1IMP C29 C22 C 0 1 Y N N N N N 187.335 172.842 120.172 0.430 -4.527 -0.353 C29 A1IMP 22 A1IMP C30 C23 C 0 1 Y N N N N N 186.075 172.462 120.624 0.482 -3.380 -1.122 C30 A1IMP 23 A1IMP C32 C24 C 0 1 N N N N N N 180.007 176.926 121.680 1.029 3.507 1.587 C32 A1IMP 24 A1IMP C33 C25 C 0 1 N N N N N N 180.130 176.091 119.221 3.199 2.476 1.186 C33 A1IMP 25 A1IMP C35 C26 C 0 1 N N N N N N 180.309 175.211 116.838 5.440 1.588 0.907 C35 A1IMP 26 A1IMP C36 C27 C 0 1 N N N N N N 181.138 176.231 116.048 6.143 2.463 -0.132 C36 A1IMP 27 A1IMP C37 C28 C 0 1 N N N N N N 180.592 176.309 114.622 7.644 2.497 0.160 C37 A1IMP 28 A1IMP N05 N1 N 0 1 Y N N N N N 181.924 174.746 122.311 0.054 1.289 -0.275 N05 A1IMP 29 A1IMP N15 N2 N 0 1 N N N N N N 186.680 175.790 127.483 -6.303 0.837 1.022 N15 A1IMP 30 A1IMP N22 N3 N 0 1 Y N N N N N 182.824 173.224 120.825 1.296 -0.236 -1.215 N22 A1IMP 31 A1IMP N31 N4 N 0 1 N N N N N N 180.532 175.998 120.662 1.872 2.487 0.959 N31 A1IMP 32 A1IMP N34 N5 N 0 1 N N N N N N 180.709 175.109 118.264 4.003 1.555 0.627 N34 A1IMP 33 A1IMP O01 O1 O 0 1 N N N N N N 182.083 173.302 117.842 4.244 -0.231 -0.683 O01 A1IMP 34 A1IMP O07 O2 O 0 1 N N N N N N 183.458 173.097 123.160 -1.063 -0.273 -1.662 O07 A1IMP 35 A1IMP O16 O3 O 0 1 N N N N N N 187.477 175.501 128.362 -5.867 1.519 2.240 O16 A1IMP 36 A1IMP O38 O4 O 0 1 N N N N N N 180.058 175.055 114.290 8.300 3.315 -0.811 O38 A1IMP 37 A1IMP O39 O5 O 0 1 N N N N N N 179.348 176.947 118.847 3.682 3.322 1.915 O39 A1IMP 38 A1IMP CL28 CL1 CL 0 0 N N N N N N 189.040 173.754 118.271 1.473 -6.363 1.343 CL28 A1IMP 39 A1IMP H1 H1 H 0 1 N N N N N N 185.477 174.361 122.082 -1.995 2.006 -2.559 H1 A1IMP 40 A1IMP H2 H2 H 0 1 N N N N N N 187.147 175.744 123.290 -4.183 2.971 -1.981 H2 A1IMP 41 A1IMP H3 H3 H 0 1 N N N N N N 189.241 176.477 126.505 -5.954 3.792 -0.640 H3 A1IMP 42 A1IMP H4 H4 H 0 1 N N N N N N 188.784 174.805 126.033 -7.163 3.405 0.608 H4 A1IMP 43 A1IMP H5 H5 H 0 1 N N N N N N 188.867 176.099 124.789 -5.429 3.370 1.008 H5 A1IMP 44 A1IMP H6 H6 H 0 1 N N N N N N 187.598 178.260 126.591 -7.050 0.359 -1.567 H6 A1IMP 45 A1IMP H7 H7 H 0 1 N N N N N N 187.097 178.009 124.885 -8.159 1.516 -0.792 H7 A1IMP 46 A1IMP H8 H8 H 0 1 N N N N N N 185.873 177.953 126.198 -7.047 2.067 -2.069 H8 A1IMP 47 A1IMP H9 H9 H 0 1 N N N N N N 184.372 176.378 128.871 -6.543 -1.080 -0.965 H9 A1IMP 48 A1IMP H10 H10 H 0 1 N N N N N N 184.434 177.089 127.223 -5.690 -2.340 -0.042 H10 A1IMP 49 A1IMP H11 H11 H 0 1 N N N N N N 183.256 175.784 127.595 -7.189 -1.626 0.601 H11 A1IMP 50 A1IMP H12 H12 H 0 1 N N N N N N 185.300 174.245 129.353 -5.700 -1.214 2.706 H12 A1IMP 51 A1IMP H13 H13 H 0 1 N N N N N N 184.244 173.408 128.165 -4.247 -1.758 1.835 H13 A1IMP 52 A1IMP H14 H14 H 0 1 N N N N N N 186.027 173.207 128.080 -4.299 -0.128 2.548 H14 A1IMP 53 A1IMP H15 H15 H 0 1 N N N N N N 183.453 173.526 125.791 -2.820 -1.352 -0.047 H15 A1IMP 54 A1IMP H16 H16 H 0 1 N N N N N N 183.053 171.642 119.474 2.723 -1.240 -2.378 H16 A1IMP 55 A1IMP H17 H17 H 0 1 N N N N N N 183.756 171.371 121.105 1.032 -1.495 -2.872 H17 A1IMP 56 A1IMP H18 H18 H 0 1 N N N N N N 184.264 172.997 117.811 3.664 -2.451 -0.493 H18 A1IMP 57 A1IMP H19 H19 H 0 1 N N N N N N 186.504 173.675 116.980 3.569 -4.489 0.885 H19 A1IMP 58 A1IMP H20 H20 H 0 1 N N N N N N 188.195 172.803 120.824 -0.478 -5.110 -0.313 H20 A1IMP 59 A1IMP H21 H21 H 0 1 N N N N N N 185.955 172.118 121.641 -0.386 -3.066 -1.683 H21 A1IMP 60 A1IMP H22 H22 H 0 1 N N N N N N 180.434 176.674 122.662 1.649 4.164 2.198 H22 A1IMP 61 A1IMP H23 H23 H 0 1 N N N N N N 180.283 177.957 121.414 0.530 4.093 0.815 H23 A1IMP 62 A1IMP H24 H24 H 0 1 N N N N N N 178.911 176.840 121.724 0.282 3.024 2.216 H24 A1IMP 63 A1IMP H25 H25 H 0 1 N N N N N N 179.251 175.510 116.792 5.842 0.575 0.861 H25 A1IMP 64 A1IMP H26 H26 H 0 1 N N N N N N 180.431 174.223 116.369 5.608 2.000 1.902 H26 A1IMP 65 A1IMP H27 H27 H 0 1 N N N N N N 182.191 175.913 116.024 5.975 2.051 -1.128 H27 A1IMP 66 A1IMP H28 H28 H 0 1 N N N N N N 181.064 177.218 116.527 5.741 3.476 -0.086 H28 A1IMP 67 A1IMP H29 H29 H 0 1 N N N N N N 181.404 176.565 113.925 7.811 2.909 1.155 H29 A1IMP 68 A1IMP H30 H30 H 0 1 N N N N N N 179.805 177.076 114.565 8.046 1.485 0.113 H30 A1IMP 69 A1IMP H31 H31 H 0 1 N N N N N N 187.006 175.273 129.155 -6.338 2.345 2.418 H31 A1IMP 70 A1IMP H32 H32 H 0 1 N N N N N N 179.712 175.082 113.406 9.257 3.382 -0.687 H32 A1IMP 71 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IMP O38 C37 SING N N 1 A1IMP C37 C36 SING N N 2 A1IMP C36 C35 SING N N 3 A1IMP C35 N34 SING N N 4 A1IMP O01 C02 DOUB N N 5 A1IMP C26 C25 DOUB Y N 6 A1IMP C26 C27 SING Y N 7 A1IMP N34 C02 SING N N 8 A1IMP N34 C33 SING N N 9 A1IMP CL28 C27 SING N N 10 A1IMP C25 C24 SING Y N 11 A1IMP C02 C03 SING N N 12 A1IMP O39 C33 DOUB N N 13 A1IMP C27 C29 DOUB Y N 14 A1IMP C33 N31 SING N N 15 A1IMP C24 C23 SING N N 16 A1IMP C24 C30 DOUB Y N 17 A1IMP C03 N22 SING Y N 18 A1IMP C03 C04 DOUB Y N 19 A1IMP C29 C30 SING Y N 20 A1IMP C23 N22 SING N N 21 A1IMP N31 C04 SING N N 22 A1IMP N31 C32 SING N N 23 A1IMP N22 C06 SING Y N 24 A1IMP C04 N05 SING Y N 25 A1IMP C06 N05 DOUB Y N 26 A1IMP C06 O07 SING N N 27 A1IMP C09 C10 DOUB Y N 28 A1IMP C09 C08 SING Y N 29 A1IMP O07 C08 SING N N 30 A1IMP C10 C11 SING Y N 31 A1IMP C08 C21 DOUB Y N 32 A1IMP C11 C20 DOUB Y N 33 A1IMP C11 C12 SING N N 34 A1IMP C21 C20 SING Y N 35 A1IMP C13 C12 SING N N 36 A1IMP C20 C17 SING N N 37 A1IMP C14 C12 SING N N 38 A1IMP C12 N15 SING N N 39 A1IMP C17 N15 SING N N 40 A1IMP C17 C18 SING N N 41 A1IMP C17 C19 SING N N 42 A1IMP N15 O16 SING N N 43 A1IMP C09 H1 SING N N 44 A1IMP C10 H2 SING N N 45 A1IMP C13 H3 SING N N 46 A1IMP C13 H4 SING N N 47 A1IMP C13 H5 SING N N 48 A1IMP C14 H6 SING N N 49 A1IMP C14 H7 SING N N 50 A1IMP C14 H8 SING N N 51 A1IMP C18 H9 SING N N 52 A1IMP C18 H10 SING N N 53 A1IMP C18 H11 SING N N 54 A1IMP C19 H12 SING N N 55 A1IMP C19 H13 SING N N 56 A1IMP C19 H14 SING N N 57 A1IMP C21 H15 SING N N 58 A1IMP C23 H16 SING N N 59 A1IMP C23 H17 SING N N 60 A1IMP C25 H18 SING N N 61 A1IMP C26 H19 SING N N 62 A1IMP C29 H20 SING N N 63 A1IMP C30 H21 SING N N 64 A1IMP C32 H22 SING N N 65 A1IMP C32 H23 SING N N 66 A1IMP C32 H24 SING N N 67 A1IMP C35 H25 SING N N 68 A1IMP C35 H26 SING N N 69 A1IMP C36 H27 SING N N 70 A1IMP C36 H28 SING N N 71 A1IMP C37 H29 SING N N 72 A1IMP C37 H30 SING N N 73 A1IMP O16 H31 SING N N 74 A1IMP O38 H32 SING N N 75 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1IMP InChI InChI 1.06 "InChI=1S/C28H32ClN5O5/c1-27(2)20-12-11-19(15-21(20)28(3,4)34(27)38)39-25-30-23-22(33(25)16-17-7-9-18(29)10-8-17)24(36)32(13-6-14-35)26(37)31(23)5/h7-12,15,35,38H,6,13-14,16H2,1-5H3" A1IMP InChIKey InChI 1.06 KVWONESNCHOGAF-UHFFFAOYSA-N A1IMP SMILES_CANONICAL CACTVS 3.385 "CN1C(=O)N(CCCO)C(=O)c2n(Cc3ccc(Cl)cc3)c(Oc4ccc5c(c4)C(C)(C)N(O)C5(C)C)nc12" A1IMP SMILES CACTVS 3.385 "CN1C(=O)N(CCCO)C(=O)c2n(Cc3ccc(Cl)cc3)c(Oc4ccc5c(c4)C(C)(C)N(O)C5(C)C)nc12" A1IMP SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1(c2ccc(cc2C(N1O)(C)C)Oc3nc4c(n3Cc5ccc(cc5)Cl)C(=O)N(C(=O)N4C)CCCO)C" A1IMP SMILES "OpenEye OEToolkits" 2.0.7 "CC1(c2ccc(cc2C(N1O)(C)C)Oc3nc4c(n3Cc5ccc(cc5)Cl)C(=O)N(C(=O)N4C)CCCO)C" # _pdbx_chem_comp_identifier.comp_id A1IMP _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "7-[(4-chlorophenyl)methyl]-3-methyl-1-(3-oxidanylpropyl)-8-(1,1,3,3-tetramethyl-2-oxidanyl-isoindol-5-yl)oxy-purine-2,6-dione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1IMP "Create component" 2024-08-27 PDBE A1IMP "Initial release" 2025-09-10 RCSB #