data_A1IMR # _chem_comp.id A1IMR _chem_comp.name "(9R)-12-[4-(dimethylamino)phenyl]-5-methyl-9-oxidanyl-4-thia-2,12-diazatricyclo[7.3.0.0^{3,7}]dodeca-1,3(7),5-trien-8-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H19 N3 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-08-27 _chem_comp.pdbx_modified_date 2026-10-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 341.427 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1IMR _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9GK3 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1IMR N9 N1 N 0 1 N N N N N N 28.033 -22.604 -37.369 0.960 0.540 0.228 N9 A1IMR 1 A1IMR C8 C1 C 0 1 Y N N N N N 27.248 -23.059 -36.354 2.276 0.852 0.141 C8 A1IMR 2 A1IMR C5 C2 C 0 1 Y N N N N N 25.400 -23.464 -34.733 4.641 1.768 0.105 C5 A1IMR 3 A1IMR C6 C3 C 0 1 N N N N N N 24.112 -23.426 -33.968 5.910 2.580 0.143 C6 A1IMR 4 A1IMR C4 C4 C 0 1 Y N N N N N 26.455 -24.290 -34.554 4.600 0.460 -0.040 C4 A1IMR 5 A1IMR C2 C5 C 0 1 N N N N N N 28.835 -24.730 -35.568 2.890 -1.479 -0.235 C2 A1IMR 6 A1IMR C18 C6 C 0 1 Y N N N N N 30.312 -21.610 -41.902 -4.363 -0.771 0.396 C18 A1IMR 7 A1IMR C14 C7 C 0 1 N N R N N N 29.856 -23.949 -36.356 1.417 -1.768 -0.355 C14 A1IMR 8 A1IMR C12 C8 C 0 1 N N N N N N 31.154 -24.052 -38.415 -0.482 -2.644 0.788 C12 A1IMR 9 A1IMR N11 N2 N 0 1 N N N N N N 30.093 -23.036 -38.483 -0.718 -1.255 0.354 N11 A1IMR 10 A1IMR C16 C9 C 0 1 Y N N N N N 30.079 -22.096 -39.558 -1.974 -0.649 0.227 C16 A1IMR 11 A1IMR C24 C10 C 0 1 Y N N N N N 29.738 -20.776 -39.329 -2.068 0.675 -0.182 C24 A1IMR 12 A1IMR C22 C11 C 0 1 N N N N N N 29.231 -18.094 -42.602 -5.813 2.546 -0.596 C22 A1IMR 13 A1IMR O1 O1 O 0 1 N N N N N N 29.081 -25.813 -35.059 3.721 -2.364 -0.287 O1 A1IMR 14 A1IMR C3 C12 C 0 1 Y N N N N N 27.529 -24.081 -35.468 3.262 -0.110 -0.057 C3 A1IMR 15 A1IMR S7 S1 S 0 1 Y N N N N N 25.681 -22.373 -36.052 3.032 2.444 0.250 S7 A1IMR 16 A1IMR C10 C13 C 0 1 N N N N N N 29.209 -23.133 -37.440 0.478 -0.650 0.094 C10 A1IMR 17 A1IMR C13 C14 C 0 1 N N N N N N 30.828 -24.836 -37.149 1.042 -2.890 0.638 C13 A1IMR 18 A1IMR O15 O2 O 0 1 N N N N N N 30.548 -23.059 -35.482 1.111 -2.177 -1.690 O15 A1IMR 19 A1IMR C17 C15 C 0 1 Y N N N N N 30.371 -22.507 -40.850 -3.124 -1.369 0.521 C17 A1IMR 20 A1IMR C19 C16 C 0 1 Y N N N N N 29.961 -20.277 -41.687 -4.458 0.549 -0.023 C19 A1IMR 21 A1IMR N20 N3 N 0 1 N N N N N N 29.922 -19.367 -42.735 -5.713 1.153 -0.154 N20 A1IMR 22 A1IMR C21 C17 C 0 1 N N N N N N 30.545 -19.657 -44.012 -6.927 0.392 0.151 C21 A1IMR 23 A1IMR C23 C18 C 0 1 Y N N N N N 29.673 -19.879 -40.379 -3.307 1.271 -0.311 C23 A1IMR 24 A1IMR H6B H1 H 0 1 N N N N N N 23.461 -22.642 -34.383 5.664 3.634 0.272 H6B A1IMR 25 A1IMR H6C H2 H 0 1 N N N N N N 23.609 -24.401 -34.049 6.530 2.247 0.975 H6C A1IMR 26 A1IMR H6A H3 H 0 1 N N N N N N 24.320 -23.207 -32.910 6.455 2.446 -0.792 H6A A1IMR 27 A1IMR H4 H4 H 0 1 N N N N N N 26.482 -25.045 -33.783 5.490 -0.143 -0.140 H4 A1IMR 28 A1IMR H18 H5 H 0 1 N N N N N N 30.541 -21.946 -42.903 -5.258 -1.333 0.621 H18 A1IMR 29 A1IMR H12A H6 H 0 0 N N N N N N 31.127 -24.706 -39.299 -0.781 -2.767 1.829 H12A A1IMR 30 A1IMR H12B H7 H 0 0 N N N N N N 32.144 -23.579 -38.339 -1.038 -3.336 0.154 H12B A1IMR 31 A1IMR H24 H8 H 0 1 N N N N N N 29.521 -20.444 -38.325 -1.173 1.237 -0.402 H24 A1IMR 32 A1IMR H22A H9 H 0 0 N N N N N N 29.321 -17.528 -43.541 -5.887 2.578 -1.683 H22A A1IMR 33 A1IMR H22B H10 H 0 0 N N N N N N 28.168 -18.275 -42.383 -6.700 3.003 -0.158 H22B A1IMR 34 A1IMR H22C H11 H 0 0 N N N N N N 29.681 -17.517 -41.781 -4.927 3.094 -0.276 H22C A1IMR 35 A1IMR H13A H12 H 0 0 N N N N N N 30.353 -25.795 -37.402 1.242 -3.874 0.213 H13A A1IMR 36 A1IMR H13B H13 H 0 0 N N N N N N 31.742 -25.022 -36.566 1.557 -2.762 1.590 H13B A1IMR 37 A1IMR H15 H14 H 0 1 N N N N N N 29.919 -22.527 -35.008 1.334 -1.520 -2.364 H15 A1IMR 38 A1IMR H17 H15 H 0 1 N N N N N N 30.646 -23.535 -41.036 -3.050 -2.396 0.847 H17 A1IMR 39 A1IMR H21C H16 H 0 0 N N N N N N 30.396 -18.807 -44.694 -7.179 0.517 1.204 H21C A1IMR 40 A1IMR H21B H17 H 0 0 N N N N N N 31.622 -19.825 -43.865 -7.749 0.757 -0.465 H21B A1IMR 41 A1IMR H21A H18 H 0 0 N N N N N N 30.089 -20.559 -44.446 -6.757 -0.664 -0.058 H21A A1IMR 42 A1IMR H23 H19 H 0 1 N N N N N N 29.395 -18.854 -40.185 -3.380 2.298 -0.637 H23 A1IMR 43 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IMR O1 C2 DOUB N N 1 A1IMR C2 C3 SING N N 2 A1IMR C3 C4 SING Y N 3 A1IMR C4 C5 DOUB Y N 4 A1IMR C5 C6 SING N N 5 A1IMR C5 S7 SING Y N 6 A1IMR C3 C8 DOUB Y N 7 A1IMR C8 N9 SING N N 8 A1IMR N9 C10 DOUB N N 9 A1IMR C10 N11 SING N N 10 A1IMR N11 C12 SING N N 11 A1IMR C12 C13 SING N N 12 A1IMR C13 C14 SING N N 13 A1IMR C14 O15 SING N N 14 A1IMR N11 C16 SING N N 15 A1IMR C16 C17 DOUB Y N 16 A1IMR C17 C18 SING Y N 17 A1IMR C18 C19 DOUB Y N 18 A1IMR C19 N20 SING N N 19 A1IMR N20 C21 SING N N 20 A1IMR N20 C22 SING N N 21 A1IMR C19 C23 SING Y N 22 A1IMR C23 C24 DOUB Y N 23 A1IMR C14 C2 SING N N 24 A1IMR C8 S7 SING Y N 25 A1IMR C14 C10 SING N N 26 A1IMR C24 C16 SING Y N 27 A1IMR C6 H6B SING N N 28 A1IMR C6 H6C SING N N 29 A1IMR C6 H6A SING N N 30 A1IMR C4 H4 SING N N 31 A1IMR C18 H18 SING N N 32 A1IMR C12 H12A SING N N 33 A1IMR C12 H12B SING N N 34 A1IMR C24 H24 SING N N 35 A1IMR C22 H22A SING N N 36 A1IMR C22 H22B SING N N 37 A1IMR C22 H22C SING N N 38 A1IMR C13 H13A SING N N 39 A1IMR C13 H13B SING N N 40 A1IMR O15 H15 SING N N 41 A1IMR C17 H17 SING N N 42 A1IMR C21 H21C SING N N 43 A1IMR C21 H21B SING N N 44 A1IMR C21 H21A SING N N 45 A1IMR C23 H23 SING N N 46 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1IMR InChI InChI 1.06 "InChI=1S/C18H19N3O2S/c1-11-10-14-15(22)18(23)8-9-21(17(18)19-16(14)24-11)13-6-4-12(5-7-13)20(2)3/h4-7,10,23H,8-9H2,1-3H3/t18-/m0/s1" A1IMR InChIKey InChI 1.06 UYMINPUMBJLDGI-SFHVURJKSA-N A1IMR SMILES_CANONICAL CACTVS 3.385 "CN(C)c1ccc(cc1)N2CC[C@]3(O)C(=O)c4cc(C)sc4N=C23" A1IMR SMILES CACTVS 3.385 "CN(C)c1ccc(cc1)N2CC[C]3(O)C(=O)c4cc(C)sc4N=C23" A1IMR SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cc2c(s1)N=C3[C@@](C2=O)(CCN3c4ccc(cc4)N(C)C)O" A1IMR SMILES "OpenEye OEToolkits" 2.0.7 "Cc1cc2c(s1)N=C3C(C2=O)(CCN3c4ccc(cc4)N(C)C)O" # _pdbx_chem_comp_identifier.comp_id A1IMR _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(9~{R})-12-[4-(dimethylamino)phenyl]-5-methyl-9-oxidanyl-4-thia-2,12-diazatricyclo[7.3.0.0^{3,7}]dodeca-1,3(7),5-trien-8-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1IMR "Create component" 2024-08-27 PDBE A1IMR "Initial release" 2026-10-14 RCSB #