data_A1IMX # _chem_comp.id A1IMX _chem_comp.name "4-[2-[1-[3-[3-(aminomethyl)phenoxy]propyl]-1,2,3-triazol-4-yl]ethoxy]-8-azanyl-quinoline-2-carboxylic acid" _chem_comp.type "L-peptide linking" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C24 H26 N6 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-08-28 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 462.501 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1IMX _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6Q3O _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1IMX N35 N1 N 0 1 N N N N N N -4.949 -41.284 -28.123 -11.822 0.956 1.843 N35 A1IMX 1 A1IMX C34 C1 C 0 1 N N N N N N -3.548 -41.080 -28.254 -11.476 -0.334 1.233 C34 A1IMX 2 A1IMX C32 C2 C 0 1 Y N N N N N -2.958 -41.946 -29.227 -10.324 -0.147 0.280 C32 A1IMX 3 A1IMX C33 C3 C 0 1 Y N N N N N -1.621 -42.369 -29.041 -9.025 -0.275 0.734 C33 A1IMX 4 A1IMX C31 C4 C 0 1 Y N N N N N -3.603 -42.341 -30.421 -10.567 0.148 -1.048 C31 A1IMX 5 A1IMX C30 C5 C 0 1 Y N N N N N -2.937 -43.151 -31.353 -9.512 0.315 -1.926 C30 A1IMX 6 A1IMX C29 C6 C 0 1 Y N N N N N -1.619 -43.590 -31.132 -8.212 0.188 -1.478 C29 A1IMX 7 A1IMX C28 C7 C 0 1 Y N N N N N -0.962 -43.180 -29.965 -7.965 -0.102 -0.144 C28 A1IMX 8 A1IMX O27 O1 O 0 1 N N N N N N 0.321 -43.487 -29.656 -6.686 -0.227 0.301 O27 A1IMX 9 A1IMX C27 C8 C 0 1 N N N N N N 1.222 -44.238 -30.458 -5.645 -0.047 -0.661 C27 A1IMX 10 A1IMX C26 C9 C 0 1 N N N N N N 2.591 -43.664 -30.141 -4.286 -0.224 0.019 C26 A1IMX 11 A1IMX C25 C10 C 0 1 N N N N N N 2.952 -42.495 -31.061 -3.171 -0.032 -1.011 C25 A1IMX 12 A1IMX N24 N2 N 0 1 Y N N N N N 1.966 -41.439 -30.783 -1.870 -0.201 -0.360 N24 A1IMX 13 A1IMX C20 C11 C 0 1 Y N N N N N 0.993 -41.037 -31.614 -0.896 -1.058 -0.745 C20 A1IMX 14 A1IMX N23 N3 N 0 1 Y N N N N N 1.879 -40.814 -29.672 -1.455 0.443 0.674 N23 A1IMX 15 A1IMX N22 N4 N 0 1 Y N N N N N 0.803 -39.908 -29.737 -0.270 0.055 0.992 N22 A1IMX 16 A1IMX C21 C12 C 0 1 Y N N N N N 0.294 -40.093 -30.979 0.124 -0.887 0.128 C21 A1IMX 17 A1IMX C50 C13 C 0 1 N N N N N N -0.917 -39.344 -31.487 1.444 -1.615 0.126 C50 A1IMX 18 A1IMX C51 C14 C 0 1 N N N N N N -0.759 -39.112 -32.971 2.586 -0.597 0.095 C51 A1IMX 19 A1IMX OB1 O2 O 0 1 N N N N N N -0.954 -40.385 -33.673 3.838 -1.287 0.093 OB1 A1IMX 20 A1IMX C81 C15 C 0 1 Y N N N N N -1.484 -40.396 -34.944 4.960 -0.525 0.066 C81 A1IMX 21 A1IMX C91 C16 C 0 1 Y N N N N N -1.948 -39.255 -35.613 4.883 0.854 0.041 C91 A1IMX 22 A1IMX CA CA C 0 1 Y N N N Y N -2.430 -39.371 -36.925 6.061 1.612 0.014 C1 A1IMX 23 A1IMX C C C 0 1 N N N N Y Y -2.886 -38.236 -37.629 5.970 3.090 -0.012 C11 A1IMX 24 A1IMX O O O 0 1 N N N N Y Y -3.129 -37.164 -37.062 4.883 3.631 -0.009 O1 A1IMX 25 A1IMX N1 N5 N 0 1 Y N N N Y N -2.548 -40.631 -37.479 7.251 1.039 0.011 N1 A1IMX 26 A1IMX C71 C19 C 0 1 Y N N N Y N -2.155 -41.755 -36.836 7.388 -0.285 0.034 C71 A1IMX 27 A1IMX C61 C20 C 0 1 Y N N N N N -1.593 -41.663 -35.553 6.243 -1.120 0.068 C61 A1IMX 28 A1IMX C52 C21 C 0 1 Y N N N N N -1.160 -42.829 -34.888 6.397 -2.513 0.092 C52 A1IMX 29 A1IMX C44 C22 C 0 1 Y N N N N N -1.263 -44.063 -35.519 7.645 -3.060 0.084 C44 A1IMX 30 A1IMX C35 C23 C 0 1 Y N N N N N -1.816 -44.164 -36.805 8.780 -2.256 0.051 C35 A1IMX 31 A1IMX C22 C24 C 0 1 Y N N N Y N -2.254 -43.008 -37.475 8.671 -0.882 0.031 C22 A1IMX 32 A1IMX N N N 0 1 N N N Y Y N -2.875 -42.947 -38.710 9.815 -0.088 0.003 N2 A1IMX 33 A1IMX H1 H1 H 0 1 N N N N N N -5.314 -40.658 -27.434 -12.593 0.857 2.487 H1 A1IMX 34 A1IMX H3 H3 H 0 1 N Y N N N N -5.395 -41.110 -29.001 -11.021 1.367 2.299 H2 A1IMX 35 A1IMX H4 H4 H 0 1 N N N N N N -3.072 -41.267 -27.280 -11.191 -1.040 2.013 H4 A1IMX 36 A1IMX H5 H5 H 0 1 N N N N N N -3.370 -40.037 -28.555 -12.338 -0.722 0.690 H5 A1IMX 37 A1IMX H6 H6 H 0 1 N N N N N N -1.093 -42.053 -28.154 -8.835 -0.509 1.771 H6 A1IMX 38 A1IMX H7 H7 H 0 1 N N N N N N -4.615 -42.017 -30.617 -11.583 0.248 -1.401 H7 A1IMX 39 A1IMX H8 H8 H 0 1 N N N N N N -3.447 -43.444 -32.259 -9.705 0.541 -2.965 H8 A1IMX 40 A1IMX H9 H9 H 0 1 N N N N N N -1.124 -44.230 -31.847 -7.388 0.319 -2.164 H9 A1IMX 41 A1IMX H10 H10 H 0 1 N N N N N N 0.987 -44.114 -31.525 -5.753 -0.785 -1.456 H10 A1IMX 42 A1IMX H11 H11 H 0 1 N N N N N N 1.178 -45.305 -30.195 -5.711 0.955 -1.085 H11 A1IMX 43 A1IMX H12 H12 H 0 1 N N N N N N 3.344 -44.456 -30.262 -4.178 0.514 0.813 H12 A1IMX 44 A1IMX H13 H13 H 0 1 N N N N N N 2.595 -43.310 -29.100 -4.220 -1.226 0.443 H13 A1IMX 45 A1IMX H14 H14 H 0 1 N N N N N N 2.892 -42.806 -32.115 -3.279 -0.770 -1.806 H14 A1IMX 46 A1IMX H15 H15 H 0 1 N N N N N N 3.968 -42.136 -30.842 -3.237 0.970 -1.435 H15 A1IMX 47 A1IMX H16 H16 H 0 1 N N N N N N 0.809 -41.408 -32.611 -0.926 -1.740 -1.582 H16 A1IMX 48 A1IMX H17 H17 H 0 1 N N N N N N -0.998 -38.377 -30.968 1.524 -2.223 1.027 H17 A1IMX 49 A1IMX H18 H18 H 0 1 N N N N N N -1.824 -39.938 -31.300 1.504 -2.256 -0.752 H18 A1IMX 50 A1IMX H19 H19 H 0 1 N N N N N N 0.250 -38.726 -33.179 2.505 0.012 -0.806 H19 A1IMX 51 A1IMX H20 H20 H 0 1 N N N N N N -1.508 -38.383 -33.313 2.526 0.044 0.974 H20 A1IMX 52 A1IMX H21 H21 H 0 1 N N N N N N -1.934 -38.293 -35.122 3.921 1.345 0.043 H21 A1IMX 53 A1IMX H23 H23 H 0 1 N N N N N N -0.750 -42.763 -33.891 5.527 -3.152 0.118 H23 A1IMX 54 A1IMX H24 H24 H 0 1 N N N N N N -0.914 -44.952 -35.015 7.755 -4.134 0.103 H24 A1IMX 55 A1IMX H25 H25 H 0 1 N N N N N N -1.905 -45.130 -37.280 9.758 -2.714 0.045 H25 A1IMX 56 A1IMX H H H 0 1 N N N Y Y N -2.914 -43.863 -39.110 9.734 0.879 -0.014 H26 A1IMX 57 A1IMX H2 H2 H 0 1 N Y N Y Y N -3.803 -42.592 -38.599 10.693 -0.501 0.001 H27 A1IMX 58 A1IMX OXT OXT O 0 1 N Y N N Y Y -2.879 -38.414 -38.975 7.093 3.833 -0.038 O2 A1IMX 59 A1IMX HXT HXT H 0 1 N Y N N Y Y -3.088 -37.593 -39.405 6.983 4.794 -0.054 H3 A1IMX 60 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IMX N C22 SING N N 1 A1IMX C O DOUB N N 2 A1IMX C CA SING N N 3 A1IMX N1 CA DOUB Y N 4 A1IMX N1 C71 SING Y N 5 A1IMX C22 C71 DOUB Y N 6 A1IMX C22 C35 SING Y N 7 A1IMX CA C91 SING Y N 8 A1IMX C71 C61 SING Y N 9 A1IMX C35 C44 DOUB Y N 10 A1IMX C91 C81 DOUB Y N 11 A1IMX C61 C81 SING Y N 12 A1IMX C61 C52 DOUB Y N 13 A1IMX C44 C52 SING Y N 14 A1IMX C81 OB1 SING N N 15 A1IMX OB1 C51 SING N N 16 A1IMX C51 C50 SING N N 17 A1IMX C20 C21 DOUB Y N 18 A1IMX C20 N24 SING Y N 19 A1IMX C50 C21 SING N N 20 A1IMX C30 C29 DOUB Y N 21 A1IMX C30 C31 SING Y N 22 A1IMX C29 C28 SING Y N 23 A1IMX C25 N24 SING N N 24 A1IMX C25 C26 SING N N 25 A1IMX C21 N22 SING Y N 26 A1IMX N24 N23 SING Y N 27 A1IMX C27 C26 SING N N 28 A1IMX C27 O27 SING N N 29 A1IMX C31 C32 DOUB Y N 30 A1IMX C28 O27 SING N N 31 A1IMX C28 C33 DOUB Y N 32 A1IMX N22 N23 DOUB Y N 33 A1IMX C32 C33 SING Y N 34 A1IMX C32 C34 SING N N 35 A1IMX C34 N35 SING N N 36 A1IMX N35 H1 SING N N 37 A1IMX N35 H3 SING N N 38 A1IMX C34 H4 SING N N 39 A1IMX C34 H5 SING N N 40 A1IMX C33 H6 SING N N 41 A1IMX C31 H7 SING N N 42 A1IMX C30 H8 SING N N 43 A1IMX C29 H9 SING N N 44 A1IMX C27 H10 SING N N 45 A1IMX C27 H11 SING N N 46 A1IMX C26 H12 SING N N 47 A1IMX C26 H13 SING N N 48 A1IMX C25 H14 SING N N 49 A1IMX C25 H15 SING N N 50 A1IMX C20 H16 SING N N 51 A1IMX C50 H17 SING N N 52 A1IMX C50 H18 SING N N 53 A1IMX C51 H19 SING N N 54 A1IMX C51 H20 SING N N 55 A1IMX C91 H21 SING N N 56 A1IMX C52 H23 SING N N 57 A1IMX C44 H24 SING N N 58 A1IMX C35 H25 SING N N 59 A1IMX N H SING N N 60 A1IMX N H2 SING N N 61 A1IMX C OXT SING N N 62 A1IMX OXT HXT SING N N 63 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1IMX InChI InChI 1.06 "InChI=1S/C24H26N6O4/c25-14-16-4-1-5-18(12-16)33-10-3-9-30-15-17(28-29-30)8-11-34-22-13-21(24(31)32)27-23-19(22)6-2-7-20(23)26/h1-2,4-7,12-13,15H,3,8-11,14,25-26H2,(H,31,32)" A1IMX InChIKey InChI 1.06 GTWPGQQBIMBTAY-UHFFFAOYSA-N A1IMX SMILES_CANONICAL CACTVS 3.385 "NCc1cccc(OCCCn2cc(CCOc3cc(nc4c(N)cccc34)C(O)=O)nn2)c1" A1IMX SMILES CACTVS 3.385 "NCc1cccc(OCCCn2cc(CCOc3cc(nc4c(N)cccc34)C(O)=O)nn2)c1" A1IMX SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)OCCCn2cc(nn2)CCOc3cc(nc4c3cccc4N)C(=O)O)CN" A1IMX SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)OCCCn2cc(nn2)CCOc3cc(nc4c3cccc4N)C(=O)O)CN" # _pdbx_chem_comp_identifier.comp_id A1IMX _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "4-[2-[1-[3-[3-(aminomethyl)phenoxy]propyl]-1,2,3-triazol-4-yl]ethoxy]-8-azanyl-quinoline-2-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1IMX "Create component" 2024-08-28 PDBE A1IMX "Initial release" 2024-09-04 RCSB A1IMX "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id A1IMX _pdbx_chem_comp_pcm.modified_residue_id ? _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Non-standard residue" _pdbx_chem_comp_pcm.position "Amino-acid side chain and backbone" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom ? _pdbx_chem_comp_pcm.modified_residue_id_linking_atom ? _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #