data_A1INB # _chem_comp.id A1INB _chem_comp.name "[(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-dodecanoyloxy-propan-2-yl]-tridecnoate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C30 H60 N O8 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-09-03 _chem_comp.pdbx_modified_date 2026-03-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 593.773 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1INB _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9HFK _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1INB C01 C1 C 0 1 N N R N N N 92.712 86.096 100.354 0.602 2.231 2.168 C01 A1INB 1 A1INB C02 C2 C 0 1 N N N N N N 91.536 85.917 99.397 -0.720 1.709 2.735 C02 A1INB 2 A1INB C04 C3 C 0 1 N N N N N N 91.196 85.291 97.172 -2.761 0.738 1.980 C04 A1INB 3 A1INB C06 C4 C 0 1 N N N N N N 91.816 85.000 95.808 -3.686 0.225 0.906 C06 A1INB 4 A1INB C07 C5 C 0 1 N N N N N N 92.067 86.279 95.012 -4.981 -0.278 1.546 C07 A1INB 5 A1INB C08 C6 C 0 1 N N N N N N 92.705 86.013 93.652 -5.920 -0.799 0.456 C08 A1INB 6 A1INB C09 C7 C 0 1 N N N N N N 91.791 85.199 92.741 -7.215 -1.302 1.096 C09 A1INB 7 A1INB C10 C8 C 0 1 N N N N N N 91.427 85.956 91.466 -8.154 -1.823 0.006 C10 A1INB 8 A1INB C11 C9 C 0 1 N N N N N N 92.250 85.516 90.260 -9.449 -2.326 0.646 C11 A1INB 9 A1INB C12 C10 C 0 1 N N N N N N 92.687 86.703 89.404 -10.388 -2.847 -0.444 C12 A1INB 10 A1INB C13 C11 C 0 1 N N N N N N 91.823 86.873 88.155 -11.683 -3.351 0.197 C13 A1INB 11 A1INB C14 C12 C 0 1 N N N N N N 92.433 86.213 86.922 -12.622 -3.872 -0.893 C14 A1INB 12 A1INB C15 C13 C 0 1 N N N N N N 92.388 87.128 85.699 -13.917 -4.375 -0.253 C15 A1INB 13 A1INB C16 C14 C 0 1 N N N N N N 91.416 86.626 84.633 -14.856 -4.896 -1.343 C16 A1INB 14 A1INB C21 C15 C 0 1 N N N N N N 92.624 85.060 101.471 0.316 3.295 1.106 C21 A1INB 15 A1INB C27 C16 C 0 1 N N N N N N 92.993 85.975 106.334 -2.425 3.068 -3.399 C27 A1INB 16 A1INB C28 C17 C 0 1 N N N N N N 93.037 87.040 107.430 -3.188 1.917 -4.059 C28 A1INB 17 A1INB C31 C18 C 0 1 N N N N N N 93.656 88.239 100.395 2.678 1.217 1.584 C31 A1INB 18 A1INB C33 C19 C 0 1 N N N N N N 94.627 87.726 99.330 3.510 0.115 0.979 C33 A1INB 19 A1INB C34 C20 C 0 1 N N N N N N 94.956 88.777 98.269 4.994 0.455 1.129 C34 A1INB 20 A1INB C35 C21 C 0 1 N N N N N N 95.091 88.156 96.877 5.838 -0.663 0.515 C35 A1INB 21 A1INB C36 C22 C 0 1 N N N N N N 95.332 89.198 95.785 7.322 -0.323 0.664 C36 A1INB 22 A1INB C37 C23 C 0 1 N N N N N N 95.261 88.588 94.382 8.166 -1.442 0.050 C37 A1INB 23 A1INB C38 C24 C 0 1 N N N N N N 95.402 89.643 93.284 9.650 -1.102 0.200 C38 A1INB 24 A1INB C39 C25 C 0 1 N N N N N N 95.732 89.028 91.919 10.494 -2.220 -0.414 C39 A1INB 25 A1INB C40 C26 C 0 1 N N N N N N 95.203 89.940 90.813 11.978 -1.880 -0.264 C40 A1INB 26 A1INB C41 C27 C 0 1 N N N N N N 95.489 89.684 89.550 12.822 -2.999 -0.878 C41 A1INB 27 A1INB C42 C28 C 0 1 N N N N N N 94.952 90.604 88.451 14.307 -2.659 -0.729 C42 A1INB 28 A1INB C43 C29 C 0 1 N N N N N N 95.369 90.067 87.079 15.151 -3.778 -1.343 C43 A1INB 29 A1INB C44 C30 C 0 1 N N N N N N 94.768 90.886 85.934 16.635 -3.438 -1.193 C44 A1INB 30 A1INB N29 N1 N 0 1 N N N N N N 92.288 88.215 107.023 -4.375 1.593 -3.257 N29 A1INB 31 A1INB O03 O1 O 0 1 N N N N N N 91.928 85.084 98.346 -1.558 1.233 1.649 O03 A1INB 32 A1INB O05 O2 O 0 1 N N N N N N 90.084 85.687 97.238 -3.103 0.705 3.138 O05 A1INB 33 A1INB O22 O3 O 0 1 N N N N N N 92.186 85.694 102.637 -0.556 2.754 0.112 O22 A1INB 34 A1INB O24 O4 O 0 1 N N N N N N 94.281 85.052 103.997 -1.992 4.817 -0.658 O24 A1INB 35 A1INB O25 O5 O 0 1 N N N N N N 94.058 87.377 103.212 0.099 4.135 -1.896 O25 A1INB 36 A1INB O26 O6 O 0 1 N N N N N N 92.560 86.583 105.151 -1.921 2.641 -2.132 O26 A1INB 37 A1INB O30 O7 O 0 1 N N N N N N 92.671 87.383 100.905 1.339 1.133 1.567 O30 A1INB 38 A1INB O32 O8 O 0 1 N N N N N N 93.741 89.352 100.794 3.217 2.176 2.083 O32 A1INB 39 A1INB P23 P1 P 0 1 N N N N N N 93.309 86.178 103.741 -1.067 3.598 -1.160 P23 A1INB 40 A1INB H1 H1 H 0 1 N N N N N N 93.649 85.942 99.799 1.194 2.669 2.971 H1 A1INB 41 A1INB H2 H2 H 0 1 N N N N N N 91.233 86.896 98.998 -0.520 0.890 3.426 H2 A1INB 42 A1INB H3 H3 H 0 1 N N N N N N 90.690 85.461 99.933 -1.232 2.513 3.263 H3 A1INB 43 A1INB H4 H4 H 0 1 N N N N N N 91.133 84.354 95.237 -3.914 1.031 0.208 H4 A1INB 44 A1INB H5 H5 H 0 1 N N N N N N 92.774 84.480 95.956 -3.203 -0.592 0.371 H5 A1INB 45 A1INB H6 H6 H 0 1 N N N N N N 92.737 86.929 95.594 -4.752 -1.084 2.244 H6 A1INB 46 A1INB H7 H7 H 0 1 N N N N N N 91.106 86.790 94.855 -5.464 0.540 2.081 H7 A1INB 47 A1INB H8 H8 H 0 1 N N N N N N 93.643 85.458 93.802 -6.149 0.007 -0.242 H8 A1INB 48 A1INB H9 H9 H 0 1 N N N N N N 92.923 86.976 93.167 -5.437 -1.617 -0.079 H9 A1INB 49 A1INB H10 H10 H 0 1 N N N N N N 90.867 84.960 93.288 -6.986 -2.108 1.794 H10 A1INB 50 A1INB H11 H11 H 0 1 N N N N N N 92.305 84.266 92.465 -7.698 -0.484 1.631 H11 A1INB 51 A1INB H12 H12 H 0 1 N N N N N N 91.597 87.030 91.634 -8.383 -1.018 -0.691 H12 A1INB 52 A1INB H13 H13 H 0 1 N N N N N N 90.363 85.783 91.247 -7.671 -2.641 -0.529 H13 A1INB 53 A1INB H14 H14 H 0 1 N N N N N N 91.642 84.838 89.643 -9.220 -3.132 1.344 H14 A1INB 54 A1INB H15 H15 H 0 1 N N N N N N 93.146 84.985 90.615 -9.932 -1.509 1.181 H15 A1INB 55 A1INB H16 H16 H 0 1 N N N N N N 93.731 86.548 89.093 -10.617 -2.042 -1.141 H16 A1INB 56 A1INB H17 H17 H 0 1 N N N N N N 92.617 87.619 90.009 -9.905 -3.665 -0.979 H17 A1INB 57 A1INB H18 H18 H 0 1 N N N N N N 91.702 87.948 87.955 -11.454 -4.156 0.894 H18 A1INB 58 A1INB H19 H19 H 0 1 N N N N N N 90.838 86.422 88.345 -12.166 -2.533 0.732 H19 A1INB 59 A1INB H20 H20 H 0 1 N N N N N N 91.872 85.293 86.698 -12.851 -3.066 -1.591 H20 A1INB 60 A1INB H21 H21 H 0 1 N N N N N N 93.482 85.960 87.137 -12.139 -4.689 -1.428 H21 A1INB 61 A1INB H22 H22 H 0 1 N N N N N N 93.396 87.182 85.261 -13.688 -5.181 0.444 H22 A1INB 62 A1INB H23 H23 H 0 1 N N N N N N 92.073 88.132 86.020 -14.400 -3.557 0.282 H23 A1INB 63 A1INB H24 H24 H 0 1 N N N N N N 91.421 87.317 83.777 -14.373 -5.714 -1.878 H24 A1INB 64 A1INB H25 H25 H 0 1 N N N N N N 91.725 85.625 84.298 -15.779 -5.254 -0.887 H25 A1INB 65 A1INB H26 H26 H 0 1 N N N N N N 90.402 86.574 85.057 -15.085 -4.090 -2.041 H26 A1INB 66 A1INB H27 H27 H 0 1 N N N N N N 91.911 84.271 101.189 -0.157 4.158 1.575 H27 A1INB 67 A1INB H28 H28 H 0 1 N N N N N N 93.615 84.615 101.642 1.252 3.603 0.640 H28 A1INB 68 A1INB H29 H29 H 0 1 N N N N N N 92.293 85.176 106.619 -1.595 3.367 -4.038 H29 A1INB 69 A1INB H30 H30 H 0 1 N N N N N N 93.997 85.549 106.188 -3.097 3.914 -3.256 H30 A1INB 70 A1INB H31 H31 H 0 1 N N N N N N 92.597 86.631 108.351 -3.496 2.213 -5.062 H31 A1INB 71 A1INB H32 H32 H 0 1 N N N N N N 94.083 87.324 107.618 -2.541 1.041 -4.121 H32 A1INB 72 A1INB H33 H33 H 0 1 N N N N N N 94.175 86.855 98.833 3.298 -0.823 1.492 H33 A1INB 73 A1INB H34 H34 H 0 1 N N N N N N 95.561 87.422 99.824 3.265 0.014 -0.079 H34 A1INB 74 A1INB H35 H35 H 0 1 N N N N N N 95.905 89.266 98.534 5.205 1.393 0.615 H35 A1INB 75 A1INB H36 H36 H 0 1 N N N N N N 94.151 89.526 98.248 5.238 0.556 2.186 H36 A1INB 76 A1INB H37 H37 H 0 1 N N N N N N 94.165 87.610 96.644 5.626 -1.601 1.028 H37 A1INB 77 A1INB H38 H38 H 0 1 N N N N N N 95.938 87.454 96.886 5.593 -0.764 -0.543 H38 A1INB 78 A1INB H39 H39 H 0 1 N N N N N N 96.329 89.640 95.930 7.533 0.615 0.151 H39 A1INB 79 A1INB H40 H40 H 0 1 N N N N N N 94.567 89.984 95.869 7.567 -0.222 1.722 H40 A1INB 80 A1INB H41 H41 H 0 1 N N N N N N 94.291 88.082 94.265 7.955 -2.380 0.563 H41 A1INB 81 A1INB H42 H42 H 0 1 N N N N N N 96.073 87.854 94.274 7.921 -1.543 -1.007 H42 A1INB 82 A1INB H43 H43 H 0 1 N N N N N N 96.209 90.337 93.563 9.861 -0.164 -0.313 H43 A1INB 83 A1INB H44 H44 H 0 1 N N N N N N 94.455 90.196 93.202 9.895 -1.001 1.257 H44 A1INB 84 A1INB H45 H45 H 0 1 N N N N N N 95.258 88.039 91.837 10.283 -3.159 0.099 H45 A1INB 85 A1INB H46 H46 H 0 1 N N N N N N 96.822 88.922 91.818 10.249 -2.322 -1.471 H46 A1INB 86 A1INB H47 H47 H 0 1 N N N N N N 95.584 90.950 91.026 12.190 -0.942 -0.777 H47 A1INB 87 A1INB H48 H48 H 0 1 N N N N N N 95.109 88.674 89.335 12.611 -3.937 -0.365 H48 A1INB 88 A1INB H49 H49 H 0 1 N N N N N N 95.362 91.615 88.588 14.518 -1.721 -1.242 H49 A1INB 89 A1INB H50 H50 H 0 1 N N N N N N 93.854 90.643 88.510 14.551 -2.558 0.329 H50 A1INB 90 A1INB H51 H51 H 0 1 N N N N N N 95.028 89.025 86.987 14.939 -4.716 -0.830 H51 A1INB 91 A1INB H52 H52 H 0 1 N N N N N N 96.466 90.102 87.003 14.906 -3.879 -2.400 H52 A1INB 92 A1INB H53 H53 H 0 1 N N N N N N 95.094 90.465 84.971 17.236 -4.235 -1.630 H53 A1INB 93 A1INB H54 H54 H 0 1 N N N N N N 93.670 90.852 85.996 16.846 -2.500 -1.706 H54 A1INB 94 A1INB H55 H55 H 0 1 N N N N N N 95.108 91.929 86.012 16.879 -3.337 -0.135 H55 A1INB 95 A1INB H56 H56 H 0 1 N N N N N N 92.325 88.902 107.748 -4.896 0.835 -3.673 H56 A1INB 96 A1INB H57 H57 H 0 1 N N N N N N 92.687 88.591 106.187 -4.121 1.378 -2.305 H57 A1INB 97 A1INB H59 H59 H 0 1 N N N N N N 95.160 85.334 103.772 -2.777 4.538 -0.166 H59 A1INB 98 A1INB H58 H58 H 0 1 N N N N N N 94.106 89.936 90.897 12.223 -1.779 0.793 H58 A1INB 99 A1INB H60 H60 H 0 1 N N N N N N 96.586 89.689 89.463 12.578 -3.100 -1.936 H60 A1INB 100 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1INB C16 C15 SING N N 1 A1INB C15 C14 SING N N 2 A1INB C44 C43 SING N N 3 A1INB C14 C13 SING N N 4 A1INB C43 C42 SING N N 5 A1INB C13 C12 SING N N 6 A1INB C42 C41 SING N N 7 A1INB C12 C11 SING N N 8 A1INB C41 C40 SING N N 9 A1INB C11 C10 SING N N 10 A1INB C40 C39 SING N N 11 A1INB C10 C09 SING N N 12 A1INB C39 C38 SING N N 13 A1INB C09 C08 SING N N 14 A1INB C38 C37 SING N N 15 A1INB C08 C07 SING N N 16 A1INB C37 C36 SING N N 17 A1INB C07 C06 SING N N 18 A1INB C36 C35 SING N N 19 A1INB C06 C04 SING N N 20 A1INB C35 C34 SING N N 21 A1INB C04 O05 DOUB N N 22 A1INB C04 O03 SING N N 23 A1INB C34 C33 SING N N 24 A1INB O03 C02 SING N N 25 A1INB C33 C31 SING N N 26 A1INB C02 C01 SING N N 27 A1INB C01 O30 SING N N 28 A1INB C01 C21 SING N N 29 A1INB C31 O32 DOUB N N 30 A1INB C31 O30 SING N N 31 A1INB C21 O22 SING N N 32 A1INB O22 P23 SING N N 33 A1INB O25 P23 DOUB N N 34 A1INB P23 O24 SING N N 35 A1INB P23 O26 SING N N 36 A1INB O26 C27 SING N N 37 A1INB C27 C28 SING N N 38 A1INB N29 C28 SING N N 39 A1INB C01 H1 SING N N 40 A1INB C02 H2 SING N N 41 A1INB C02 H3 SING N N 42 A1INB C06 H4 SING N N 43 A1INB C06 H5 SING N N 44 A1INB C07 H6 SING N N 45 A1INB C07 H7 SING N N 46 A1INB C08 H8 SING N N 47 A1INB C08 H9 SING N N 48 A1INB C09 H10 SING N N 49 A1INB C09 H11 SING N N 50 A1INB C10 H12 SING N N 51 A1INB C10 H13 SING N N 52 A1INB C11 H14 SING N N 53 A1INB C11 H15 SING N N 54 A1INB C12 H16 SING N N 55 A1INB C12 H17 SING N N 56 A1INB C13 H18 SING N N 57 A1INB C13 H19 SING N N 58 A1INB C14 H20 SING N N 59 A1INB C14 H21 SING N N 60 A1INB C15 H22 SING N N 61 A1INB C15 H23 SING N N 62 A1INB C16 H24 SING N N 63 A1INB C16 H25 SING N N 64 A1INB C16 H26 SING N N 65 A1INB C21 H27 SING N N 66 A1INB C21 H28 SING N N 67 A1INB C27 H29 SING N N 68 A1INB C27 H30 SING N N 69 A1INB C28 H31 SING N N 70 A1INB C28 H32 SING N N 71 A1INB C33 H33 SING N N 72 A1INB C33 H34 SING N N 73 A1INB C34 H35 SING N N 74 A1INB C34 H36 SING N N 75 A1INB C35 H37 SING N N 76 A1INB C35 H38 SING N N 77 A1INB C36 H39 SING N N 78 A1INB C36 H40 SING N N 79 A1INB C37 H41 SING N N 80 A1INB C37 H42 SING N N 81 A1INB C38 H43 SING N N 82 A1INB C38 H44 SING N N 83 A1INB C39 H45 SING N N 84 A1INB C39 H46 SING N N 85 A1INB C40 H47 SING N N 86 A1INB C41 H48 SING N N 87 A1INB C42 H49 SING N N 88 A1INB C42 H50 SING N N 89 A1INB C43 H51 SING N N 90 A1INB C43 H52 SING N N 91 A1INB C44 H53 SING N N 92 A1INB C44 H54 SING N N 93 A1INB C44 H55 SING N N 94 A1INB N29 H56 SING N N 95 A1INB N29 H57 SING N N 96 A1INB O24 H59 SING N N 97 A1INB C40 H58 SING N N 98 A1INB C41 H60 SING N N 99 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1INB InChI InChI 1.06 "InChI=1S/C30H60NO8P/c1-3-5-7-9-11-13-15-17-19-21-23-30(33)39-28(27-38-40(34,35)37-25-24-31)26-36-29(32)22-20-18-16-14-12-10-8-6-4-2/h28H,3-27,31H2,1-2H3,(H,34,35)/t28-/m1/s1" A1INB InChIKey InChI 1.06 PGDKJXWZRREZOX-MUUNZHRXSA-N A1INB SMILES_CANONICAL CACTVS 3.385 "CCCCCCCCCCCCC(=O)O[C@H](COC(=O)CCCCCCCCCCC)CO[P](O)(=O)OCCN" A1INB SMILES CACTVS 3.385 "CCCCCCCCCCCCC(=O)O[CH](COC(=O)CCCCCCCCCCC)CO[P](O)(=O)OCCN" A1INB SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCCCCCCCCCC(=O)O[C@H](COC(=O)CCCCCCCCCCC)COP(=O)(O)OCCN" A1INB SMILES "OpenEye OEToolkits" 2.0.7 "CCCCCCCCCCCCC(=O)OC(COC(=O)CCCCCCCCCCC)COP(=O)(O)OCCN" # _pdbx_chem_comp_identifier.comp_id A1INB _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-dodecanoyloxy-propan-2-yl] tridecanoate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1INB "Create component" 2024-09-03 PDBE A1INB "Modify coordinates" 2024-12-03 PDBE A1INB "Modify name" 2025-02-25 PDBE A1INB "Initial release" 2026-03-18 RCSB #