data_A1INM # _chem_comp.id A1INM _chem_comp.name "3-cyclohexyl-17,18-dimethoxy-11,15-dioxa-1,18lambda4-dithia-5-aza-17lambda4-polonapentacyclo[15.4.0.04,9.013,18.018,23]henicosane-2,12-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H40 N4 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-09-11 _chem_comp.pdbx_modified_date 2025-01-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 540.651 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1INM _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9GPM _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1INM C4 C1 C 0 1 Y N N N N N -5.725 -18.093 -19.571 -1.377 1.201 -0.274 C4 A1INM 1 A1INM C14 C2 C 0 1 N N N N N N -10.603 -15.356 -18.427 3.672 -2.722 0.859 C14 A1INM 2 A1INM C5 C3 C 0 1 Y N N N N N -5.983 -19.317 -18.977 -0.876 1.573 0.960 C5 A1INM 3 A1INM C6 C4 C 0 1 Y N N N N N -6.035 -19.419 -17.589 0.332 2.250 1.044 C6 A1INM 4 A1INM C11 C5 C 0 1 Y N N N N N -9.538 -17.401 -16.428 4.369 -0.012 0.104 C11 A1INM 5 A1INM C7 C6 C 0 1 N N N N N N -6.749 -21.667 -17.652 0.055 2.253 3.407 C7 A1INM 6 A1INM C8 C7 C 0 1 Y N N N N N -5.905 -18.301 -16.790 1.032 2.563 -0.115 C8 A1INM 7 A1INM C9 C8 C 0 1 N N N N N N -6.999 -17.960 -14.571 3.230 2.523 0.773 C9 A1INM 8 A1INM C10 C9 C 0 1 N N N N N N -8.248 -18.768 -14.762 4.558 2.494 0.014 C10 A1INM 9 A1INM C12 C10 C 0 1 Y N N N N N -10.154 -17.705 -17.612 5.253 -1.030 -0.023 C12 A1INM 10 A1INM C13 C11 C 0 1 N N N N N N -10.932 -16.841 -18.552 4.949 -2.503 0.045 C13 A1INM 11 A1INM N1 N1 N 0 1 Y N N N N N -9.036 -18.556 -15.965 5.082 1.128 -0.031 N1 A1INM 12 A1INM N2 N2 N 0 1 Y N N N N N -9.964 -19.036 -17.838 6.453 -0.468 -0.217 N2 A1INM 13 A1INM C3 C12 C 0 1 Y N N N N N -5.552 -16.967 -18.765 -0.714 1.554 -1.430 C3 A1INM 14 A1INM N3 N3 N 0 1 Y N N N N N -9.279 -19.567 -16.841 6.319 0.811 -0.214 N3 A1INM 15 A1INM C1 C13 C 0 1 N N N N N N -5.215 -14.773 -17.020 0.544 2.204 -3.732 C1 A1INM 16 A1INM O1 O1 O 0 1 N N N N N N -5.496 -16.050 -16.504 1.154 2.574 -2.494 O1 A1INM 17 A1INM C2 C14 C 0 1 Y N N N N N -5.658 -17.075 -17.378 0.495 2.232 -1.355 C2 A1INM 18 A1INM O2 O2 O 0 1 N N N N N N -6.264 -20.557 -16.901 0.829 2.607 2.259 O2 A1INM 19 A1INM O3 O3 O 0 1 N N N N N N -5.940 -18.486 -15.413 2.240 3.182 -0.025 O3 A1INM 20 A1INM C15 C15 C 0 1 N N N N N N -9.185 -14.978 -18.786 2.481 -2.891 -0.088 C15 A1INM 21 A1INM O4 O4 O 0 1 N N N N N N -8.703 -15.694 -19.960 1.242 -2.716 0.652 O4 A1INM 22 A1INM C16 C16 C 0 1 N N N N N N -9.089 -15.134 -21.113 0.116 -3.159 0.082 C16 A1INM 23 A1INM O5 O5 O 0 1 N N N N N N -9.782 -14.157 -21.201 0.165 -3.697 -0.998 O5 A1INM 24 A1INM C17 C17 C 0 1 N N S N N N -8.501 -15.880 -22.315 -1.216 -2.995 0.773 C17 A1INM 25 A1INM C18 C18 C 0 1 N N N N N N -9.595 -16.224 -23.320 -1.918 -4.350 0.847 C18 A1INM 26 A1INM C19 C19 C 0 1 N N N N N N -10.434 -17.376 -22.879 -2.280 -4.817 -0.565 C19 A1INM 27 A1INM C20 C20 C 0 1 N N N N N N -9.580 -18.585 -22.556 -3.234 -3.804 -1.202 C20 A1INM 28 A1INM C21 C21 C 0 1 N N N N N N -8.489 -18.262 -21.538 -2.550 -2.438 -1.312 C21 A1INM 29 A1INM N4 N4 N 0 1 N N N N N N -7.703 -17.058 -21.927 -2.046 -2.054 0.015 N4 A1INM 30 A1INM C22 C22 C 0 1 N N N N N N -6.390 -16.872 -21.663 -2.359 -0.863 0.542 C22 A1INM 31 A1INM O6 O6 O 0 1 N N N N N N -5.859 -15.760 -21.738 -2.433 -0.750 1.747 O6 A1INM 32 A1INM C23 C23 C 0 1 N N S N N N -5.571 -18.016 -21.095 -2.620 0.341 -0.329 C23 A1INM 33 A1INM C24 C24 C 0 1 N N N N N N -4.075 -17.815 -21.446 -3.821 1.123 0.207 C24 A1INM 34 A1INM C25 C25 C 0 1 N N N N N N -3.839 -18.009 -22.951 -5.058 0.222 0.207 C25 A1INM 35 A1INM C26 C26 C 0 1 N N N N N N -2.366 -17.817 -23.266 -6.258 1.005 0.743 C26 A1INM 36 A1INM C27 C27 C 0 1 N N N N N N -1.478 -18.831 -22.567 -6.513 2.222 -0.148 C27 A1INM 37 A1INM C28 C28 C 0 1 N N N N N N -1.706 -18.740 -21.080 -5.277 3.122 -0.147 C28 A1INM 38 A1INM C29 C29 C 0 1 N N N N N N -3.189 -18.806 -20.688 -4.076 2.340 -0.684 C29 A1INM 39 A1INM H17 H1 H 0 1 N N N N N N -10.782 -15.055 -17.384 3.780 -3.618 1.469 H17 A1INM 40 A1INM H16 H2 H 0 1 N N N N N N -11.282 -14.800 -19.091 3.501 -1.861 1.505 H16 A1INM 41 A1INM H5 H3 H 0 1 N N N N N N -6.144 -20.192 -19.590 -1.426 1.336 1.859 H5 A1INM 42 A1INM H13 H4 H 0 1 N N N N N N -9.470 -16.429 -15.961 3.307 -0.095 0.278 H13 A1INM 43 A1INM H7 H5 H 0 1 N N N N N N -6.895 -22.528 -16.983 -0.926 2.723 3.342 H7 A1INM 44 A1INM H8 H6 H 0 1 N N N N N N -7.708 -21.401 -18.121 -0.062 1.170 3.446 H8 A1INM 45 A1INM H6 H7 H 0 1 N N N N N N -6.019 -21.929 -18.432 0.564 2.596 4.308 H6 A1INM 46 A1INM H9 H8 H 0 1 N N N N N N -6.688 -18.012 -13.517 2.909 1.503 0.983 H9 A1INM 47 A1INM H10 H9 H 0 1 N N N N N N -7.196 -16.913 -14.844 3.360 3.064 1.711 H10 A1INM 48 A1INM H12 H10 H 0 1 N N N N N N -8.904 -18.559 -13.904 4.401 2.854 -1.002 H12 A1INM 49 A1INM H11 H11 H 0 1 N N N N N N -7.954 -19.828 -14.750 5.277 3.138 0.519 H11 A1INM 50 A1INM H15 H12 H 0 1 N N N N N N -12.004 -16.979 -18.346 5.778 -3.024 0.522 H15 A1INM 51 A1INM H14 H13 H 0 1 N N N N N N -10.713 -17.161 -19.581 4.807 -2.891 -0.964 H14 A1INM 52 A1INM H4 H14 H 0 1 N N N N N N -5.336 -16.010 -19.216 -1.134 1.304 -2.393 H4 A1INM 53 A1INM H2 H15 H 0 1 N N N N N N -5.113 -14.057 -16.192 1.172 2.536 -4.560 H2 A1INM 54 A1INM H3 H16 H 0 1 N N N N N N -4.277 -14.808 -17.593 0.433 1.121 -3.773 H3 A1INM 55 A1INM H1 H17 H 0 1 N N N N N N -6.036 -14.455 -17.680 -0.436 2.674 -3.809 H1 A1INM 56 A1INM H19 H18 H 0 1 N N N N N N -8.530 -15.213 -17.934 2.539 -2.145 -0.881 H19 A1INM 57 A1INM H18 H19 H 0 1 N N N N N N -9.148 -13.898 -18.990 2.504 -3.888 -0.526 H18 A1INM 58 A1INM H20 H20 H 0 1 N N N N N N -7.821 -15.177 -22.818 -1.053 -2.608 1.778 H20 A1INM 59 A1INM H22 H21 H 0 1 N N N N N N -9.124 -16.478 -24.281 -1.252 -5.078 1.310 H22 A1INM 60 A1INM H21 H22 H 0 1 N N N N N N -10.243 -15.345 -23.450 -2.826 -4.257 1.442 H21 A1INM 61 A1INM H23 H23 H 0 1 N N N N N N -10.999 -17.085 -21.981 -1.374 -4.892 -1.167 H23 A1INM 62 A1INM H24 H24 H 0 1 N N N N N N -11.136 -17.638 -23.685 -2.765 -5.791 -0.513 H24 A1INM 63 A1INM H25 H25 H 0 1 N N N N N N -10.225 -19.376 -22.146 -3.516 -4.149 -2.197 H25 A1INM 64 A1INM H26 H26 H 0 1 N N N N N N -9.106 -18.942 -23.482 -4.128 -3.713 -0.585 H26 A1INM 65 A1INM H27 H27 H 0 1 N N N N N N -8.958 -18.079 -20.560 -1.719 -2.501 -2.014 H27 A1INM 66 A1INM H28 H28 H 0 1 N N N N N N -7.807 -19.122 -21.463 -3.269 -1.697 -1.661 H28 A1INM 67 A1INM H29 H29 H 0 1 N N N N N N -5.915 -18.962 -21.538 -2.809 0.024 -1.355 H29 A1INM 68 A1INM H30 H30 H 0 1 N N N N N N -3.783 -16.791 -21.169 -3.613 1.455 1.225 H30 A1INM 69 A1INM H32 H31 H 0 1 N N N N N N -4.432 -17.272 -23.512 -5.266 -0.109 -0.810 H32 A1INM 70 A1INM H31 H32 H 0 1 N N N N N N -4.146 -19.025 -23.241 -4.876 -0.645 0.842 H31 A1INM 71 A1INM H33 H33 H 0 1 N N N N N N -2.223 -17.915 -24.352 -7.140 0.363 0.743 H33 A1INM 72 A1INM H34 H34 H 0 1 N N N N N N -2.067 -16.808 -22.946 -6.051 1.337 1.761 H34 A1INM 73 A1INM H35 H35 H 0 1 N N N N N N -1.728 -19.843 -22.917 -6.721 1.890 -1.165 H35 A1INM 74 A1INM H36 H36 H 0 1 N N N N N N -0.423 -18.615 -22.792 -7.369 2.779 0.234 H36 A1INM 75 A1INM H37 H37 H 0 1 N N N N N N -1.179 -19.574 -20.594 -5.458 3.990 -0.782 H37 A1INM 76 A1INM H38 H38 H 0 1 N N N N N N -1.292 -17.786 -20.721 -5.069 3.454 0.870 H38 A1INM 77 A1INM H40 H39 H 0 1 N N N N N N -3.273 -18.593 -19.612 -3.195 2.982 -0.684 H40 A1INM 78 A1INM H39 H40 H 0 1 N N N N N N -3.556 -19.823 -20.890 -4.284 2.009 -1.701 H39 A1INM 79 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1INM C18 C19 SING N N 1 A1INM C18 C17 SING N N 2 A1INM C26 C25 SING N N 3 A1INM C26 C27 SING N N 4 A1INM C25 C24 SING N N 5 A1INM C19 C20 SING N N 6 A1INM C27 C28 SING N N 7 A1INM C20 C21 SING N N 8 A1INM C17 N4 SING N N 9 A1INM C17 C16 SING N N 10 A1INM N4 C22 SING N N 11 A1INM N4 C21 SING N N 12 A1INM O6 C22 DOUB N N 13 A1INM C22 C23 SING N N 14 A1INM C24 C23 SING N N 15 A1INM C24 C29 SING N N 16 A1INM O5 C16 DOUB N N 17 A1INM C16 O4 SING N N 18 A1INM C23 C4 SING N N 19 A1INM C28 C29 SING N N 20 A1INM O4 C15 SING N N 21 A1INM C4 C5 DOUB Y N 22 A1INM C4 C3 SING Y N 23 A1INM C5 C6 SING Y N 24 A1INM C15 C14 SING N N 25 A1INM C3 C2 DOUB Y N 26 A1INM C13 C14 SING N N 27 A1INM C13 C12 SING N N 28 A1INM N2 C12 SING Y N 29 A1INM N2 N3 DOUB Y N 30 A1INM C7 O2 SING N N 31 A1INM C12 C11 DOUB Y N 32 A1INM C6 O2 SING N N 33 A1INM C6 C8 DOUB Y N 34 A1INM C2 C8 SING Y N 35 A1INM C2 O1 SING N N 36 A1INM C1 O1 SING N N 37 A1INM N3 N1 SING Y N 38 A1INM C8 O3 SING N N 39 A1INM C11 N1 SING Y N 40 A1INM N1 C10 SING N N 41 A1INM O3 C9 SING N N 42 A1INM C10 C9 SING N N 43 A1INM C14 H17 SING N N 44 A1INM C14 H16 SING N N 45 A1INM C5 H5 SING N N 46 A1INM C11 H13 SING N N 47 A1INM C7 H7 SING N N 48 A1INM C7 H8 SING N N 49 A1INM C7 H6 SING N N 50 A1INM C9 H9 SING N N 51 A1INM C9 H10 SING N N 52 A1INM C10 H12 SING N N 53 A1INM C10 H11 SING N N 54 A1INM C13 H15 SING N N 55 A1INM C13 H14 SING N N 56 A1INM C3 H4 SING N N 57 A1INM C1 H2 SING N N 58 A1INM C1 H3 SING N N 59 A1INM C1 H1 SING N N 60 A1INM C15 H19 SING N N 61 A1INM C15 H18 SING N N 62 A1INM C17 H20 SING N N 63 A1INM C18 H22 SING N N 64 A1INM C18 H21 SING N N 65 A1INM C19 H23 SING N N 66 A1INM C19 H24 SING N N 67 A1INM C20 H25 SING N N 68 A1INM C20 H26 SING N N 69 A1INM C21 H27 SING N N 70 A1INM C21 H28 SING N N 71 A1INM C23 H29 SING N N 72 A1INM C24 H30 SING N N 73 A1INM C25 H32 SING N N 74 A1INM C25 H31 SING N N 75 A1INM C26 H33 SING N N 76 A1INM C26 H34 SING N N 77 A1INM C27 H35 SING N N 78 A1INM C27 H36 SING N N 79 A1INM C28 H37 SING N N 80 A1INM C28 H38 SING N N 81 A1INM C29 H40 SING N N 82 A1INM C29 H39 SING N N 83 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1INM InChI InChI 1.06 "InChI=1S/C29H40N4O6/c1-36-24-17-21-18-25(37-2)27(24)38-16-14-32-19-22(30-31-32)11-8-15-39-29(35)23-12-6-7-13-33(23)28(34)26(21)20-9-4-3-5-10-20/h17-20,23,26H,3-16H2,1-2H3/t23-,26-/m0/s1" A1INM InChIKey InChI 1.06 BBGGAOVMTSBXIS-OZXSUGGESA-N A1INM SMILES_CANONICAL CACTVS 3.385 "COc1cc2cc(OC)c1OCCn3cc(CCCOC(=O)[C@@H]4CCCCN4C(=O)[C@H]2C5CCCCC5)nn3" A1INM SMILES CACTVS 3.385 "COc1cc2cc(OC)c1OCCn3cc(CCCOC(=O)[CH]4CCCCN4C(=O)[CH]2C5CCCCC5)nn3" A1INM SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1cc2cc(c1OCCn3cc(nn3)CCCOC(=O)[C@@H]4CCCCN4C(=O)[C@H]2C5CCCCC5)OC" A1INM SMILES "OpenEye OEToolkits" 2.0.7 "COc1cc2cc(c1OCCn3cc(nn3)CCCOC(=O)C4CCCCN4C(=O)C2C5CCCCC5)OC" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1INM "Create component" 2024-09-11 PDBE A1INM "Initial release" 2025-01-15 RCSB #