data_A1INN # _chem_comp.id A1INN _chem_comp.name "3-cyclohexyl-1,19-dimethoxy-11,16-dioxa-19lambda4-polona-1,13-diaza-2lambda5-polonapentacyclo[16.4.0.04,9.013,19.020,25]docosane-2,12-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H40 N4 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-09-11 _chem_comp.pdbx_modified_date 2025-01-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 540.651 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1INN _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9GPN _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1INN C4 C1 C 0 1 Y N N N N N -10.195 11.759 14.301 -1.487 1.165 -0.286 C4 A1INN 1 A1INN C14 C2 C 0 1 N N N N N N -10.446 17.450 15.115 4.051 -2.924 0.297 C14 A1INN 2 A1INN C5 C3 C 0 1 Y N N N N N -11.423 11.316 14.786 -0.903 1.577 0.899 C5 A1INN 3 A1INN C6 C4 C 0 1 Y N N N N N -11.732 11.426 16.134 0.224 2.382 0.880 C6 A1INN 4 A1INN C11 C5 C 0 1 N N N N N N -13.483 14.155 17.441 5.256 1.934 0.092 C11 A1INN 5 A1INN C7 C6 C 0 1 N N N N N N -13.952 10.506 15.888 0.187 2.333 3.257 C7 A1INN 6 A1INN C8 C7 C 0 1 Y N N N N N -10.813 11.994 17.012 0.765 2.781 -0.338 C8 A1INN 7 A1INN C9 C8 C 0 1 N N N N N N -11.401 13.496 18.786 3.029 3.041 0.342 C9 A1INN 8 A1INN C10 C9 C 0 1 N N N N N N -12.887 13.810 18.812 3.954 2.297 -0.624 C10 A1INN 9 A1INN C12 C10 C 0 1 Y N N N N N -11.718 15.400 16.111 4.317 -0.393 0.043 C12 A1INN 10 A1INN C13 C11 C 0 1 Y N N N N N -11.530 16.732 15.862 4.786 -1.612 0.399 C13 A1INN 11 A1INN N1 N1 N 0 1 Y N N N N N -12.847 15.327 16.846 5.309 0.486 0.314 N1 A1INN 12 A1INN N2 N2 N 0 1 Y N N N N N -12.527 17.404 16.491 6.027 -1.422 0.859 N2 A1INN 13 A1INN C3 C12 C 0 1 Y N N N N N -9.268 12.318 15.182 -0.982 1.594 -1.497 C3 A1INN 14 A1INN N3 N3 N 0 1 Y N N N N N -13.340 16.555 17.084 6.307 -0.167 0.799 N3 A1INN 15 A1INN C1 C13 C 0 1 N N N N N N -7.439 13.319 17.131 -0.028 2.387 -3.895 C1 A1INN 16 A1INN O1 O1 O 0 1 N N N N N N -8.763 12.971 17.499 0.654 2.816 -2.715 O1 A1INN 17 A1INN C2 C14 C 0 1 Y N N N N N -9.578 12.429 16.539 0.148 2.399 -1.524 C2 A1INN 18 A1INN O2 O2 O 0 1 N N N N N N -12.909 11.032 16.723 0.798 2.781 2.046 O2 A1INN 19 A1INN O3 O3 O 0 1 N N N N N N -11.198 12.132 18.334 1.892 3.538 -0.366 O3 A1INN 20 A1INN C15 C15 C 0 1 N N N N N N -9.232 16.579 14.876 2.776 -2.740 -0.527 C15 A1INN 21 A1INN O4 O4 O 0 1 N N N N N N -9.563 15.682 13.770 1.618 -2.725 0.349 O4 A1INN 22 A1INN C16 C16 C 0 1 N N N N N N -9.347 16.149 12.526 0.434 -3.042 -0.192 C16 A1INN 23 A1INN O5 O5 O 0 1 N N N N N N -8.968 17.253 12.276 0.380 -3.353 -1.358 O5 A1INN 24 A1INN C17 C17 C 0 1 N N S N N N -9.607 15.114 11.450 -0.830 -3.019 0.627 C17 A1INN 25 A1INN C18 C18 C 0 1 N N N N N N -10.489 15.720 10.370 -1.394 -4.436 0.729 C18 A1INN 26 A1INN C19 C19 C 0 1 N N N N N N -11.913 15.920 10.870 -1.838 -4.893 -0.663 C19 A1INN 27 A1INN C20 C20 C 0 1 N N N N N N -12.504 14.582 11.247 -2.941 -3.968 -1.178 C20 A1INN 28 A1INN C21 C21 C 0 1 N N N N N N -11.647 13.842 12.298 -2.409 -2.538 -1.299 C21 A1INN 29 A1INN N4 N4 N 0 1 N N N N N N -10.196 13.877 11.991 -1.814 -2.146 -0.017 N4 A1INN 30 A1INN C22 C22 C 0 1 N N N N N N -9.322 12.889 12.276 -2.179 -0.998 0.573 C22 A1INN 31 A1INN O6 O6 O 0 1 N N N N N N -8.102 13.081 12.181 -2.135 -0.913 1.783 O6 A1INN 32 A1INN C23 C23 C 0 1 N N S N N N -9.860 11.582 12.820 -2.641 0.190 -0.233 C23 A1INN 33 A1INN C24 C24 C 0 1 N N N N N N -8.859 10.426 12.555 -3.846 0.844 0.446 C24 A1INN 34 A1INN C25 C25 C 0 1 N N N N N N -8.800 10.034 11.073 -4.987 -0.170 0.548 C25 A1INN 35 A1INN C26 C26 C 0 1 N N N N N N -7.744 8.956 10.839 -6.192 0.484 1.227 C26 A1INN 36 A1INN C27 C27 C 0 1 N N N N N N -8.036 7.716 11.646 -6.651 1.687 0.401 C27 A1INN 37 A1INN C28 C28 C 0 1 N N N N N N -8.234 8.020 13.133 -5.511 2.701 0.299 C28 A1INN 38 A1INN C29 C29 C 0 1 N N N N N N -9.204 9.180 13.373 -4.306 2.047 -0.380 C29 A1INN 39 A1INN H17 H1 H 0 1 N N N N N N -10.139 18.330 15.699 4.692 -3.662 -0.187 H17 A1INN 40 A1INN H16 H2 H 0 1 N N N N N N -10.844 17.775 14.142 3.789 -3.271 1.296 H16 A1INN 41 A1INN H5 H3 H 0 1 N N N N N N -12.142 10.883 14.106 -1.328 1.269 1.843 H5 A1INN 42 A1INN H14 H4 H 0 1 N N N N N N -14.557 14.357 17.562 6.104 2.239 -0.521 H14 A1INN 43 A1INN H13 H5 H 0 1 N N N N N N -13.345 13.296 16.768 5.299 2.449 1.052 H13 A1INN 44 A1INN H7 H6 H 0 1 N N N N N N -14.820 10.240 16.509 -0.841 2.691 3.299 H7 A1INN 45 A1INN H8 H7 H 0 1 N N N N N N -14.249 11.266 15.150 0.193 1.243 3.286 H8 A1INN 46 A1INN H6 H8 H 0 1 N N N N N N -13.586 9.610 15.365 0.743 2.722 4.110 H6 A1INN 47 A1INN H9 H9 H 0 1 N N N N N N -10.985 13.612 19.798 2.699 2.360 1.125 H9 A1INN 48 A1INN H10 H10 H 0 1 N N N N N N -10.893 14.189 18.099 3.569 3.875 0.791 H10 A1INN 49 A1INN H12 H11 H 0 1 N N N N N N -13.046 14.667 19.483 4.175 2.935 -1.479 H12 A1INN 50 A1INN H11 H12 H 0 1 N N N N N N -13.418 12.931 19.207 3.462 1.387 -0.968 H11 A1INN 51 A1INN H15 H13 H 0 1 N N N N N N -11.094 14.580 15.787 3.347 -0.168 -0.374 H15 A1INN 52 A1INN H4 H14 H 0 1 N N N N N N -8.313 12.664 14.815 -1.464 1.305 -2.419 H4 A1INN 53 A1INN H2 H15 H 0 1 N N N N N N -6.914 13.738 18.002 -0.026 1.298 -3.941 H2 A1INN 54 A1INN H3 H16 H 0 1 N N N N N N -6.908 12.422 16.780 -1.056 2.748 -3.872 H3 A1INN 55 A1INN H1 H17 H 0 1 N N N N N N -7.467 14.067 16.325 0.478 2.789 -4.773 H1 A1INN 56 A1INN H19 H18 H 0 1 N N N N N N -9.001 15.996 15.780 2.830 -1.798 -1.072 H19 A1INN 57 A1INN H18 H19 H 0 1 N N N N N N -8.366 17.203 14.611 2.681 -3.563 -1.235 H18 A1INN 58 A1INN H20 H20 H 0 1 N N N N N N -8.641 14.862 10.988 -0.603 -2.643 1.623 H20 A1INN 59 A1INN H22 H21 H 0 1 N N N N N N -10.505 15.047 9.500 -0.624 -5.109 1.106 H22 A1INN 60 A1INN H21 H22 H 0 1 N N N N N N -10.073 16.694 10.072 -2.249 -4.441 1.405 H21 A1INN 61 A1INN H23 H23 H 0 1 N N N N N N -11.904 16.579 11.751 -0.988 -4.859 -1.344 H23 A1INN 62 A1INN H24 H24 H 0 1 N N N N N N -12.520 16.379 10.076 -2.217 -5.913 -0.606 H24 A1INN 63 A1INN H25 H25 H 0 1 N N N N N N -13.511 14.743 11.660 -3.276 -4.314 -2.156 H25 A1INN 64 A1INN H26 H26 H 0 1 N N N N N N -12.574 13.958 10.344 -3.781 -3.984 -0.483 H26 A1INN 65 A1INN H27 H27 H 0 1 N N N N N N -11.809 14.314 13.278 -1.652 -2.494 -2.082 H27 A1INN 66 A1INN H28 H28 H 0 1 N N N N N N -11.972 12.792 12.339 -3.229 -1.863 -1.545 H28 A1INN 67 A1INN H29 H29 H 0 1 N N N N N N -10.793 11.346 12.286 -2.907 -0.126 -1.241 H29 A1INN 68 A1INN H30 H30 H 0 1 N N N N N N -7.859 10.769 12.858 -3.564 1.176 1.445 H30 A1INN 69 A1INN H32 H31 H 0 1 N N N N N N -8.548 10.922 10.475 -5.268 -0.502 -0.451 H32 A1INN 70 A1INN H31 H32 H 0 1 N N N N N N -9.783 9.650 10.762 -4.659 -1.027 1.137 H31 A1INN 71 A1INN H33 H33 H 0 1 N N N N N N -7.731 8.693 9.771 -7.004 -0.239 1.300 H33 A1INN 72 A1INN H34 H34 H 0 1 N N N N N N -6.759 9.350 11.131 -5.910 0.816 2.226 H34 A1INN 73 A1INN H35 H35 H 0 1 N N N N N N -8.952 7.249 11.256 -6.933 1.355 -0.599 H35 A1INN 74 A1INN H36 H36 H 0 1 N N N N N N -7.193 7.017 11.538 -7.510 2.153 0.884 H36 A1INN 75 A1INN H37 H37 H 0 1 N N N N N N -8.631 7.121 13.627 -5.838 3.558 -0.290 H37 A1INN 76 A1INN H38 H38 H 0 1 N N N N N N -7.259 8.279 13.572 -5.229 3.033 1.298 H38 A1INN 77 A1INN H40 H39 H 0 1 N N N N N N -9.178 9.443 14.441 -3.493 2.770 -0.453 H40 A1INN 78 A1INN H39 H40 H 0 1 N N N N N N -10.218 8.851 13.101 -4.587 1.715 -1.380 H39 A1INN 79 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1INN C18 C19 SING N N 1 A1INN C18 C17 SING N N 2 A1INN C26 C25 SING N N 3 A1INN C26 C27 SING N N 4 A1INN C19 C20 SING N N 5 A1INN C25 C24 SING N N 6 A1INN C20 C21 SING N N 7 A1INN C17 N4 SING N N 8 A1INN C17 C16 SING N N 9 A1INN C27 C28 SING N N 10 A1INN N4 C22 SING N N 11 A1INN N4 C21 SING N N 12 A1INN O6 C22 DOUB N N 13 A1INN C22 C23 SING N N 14 A1INN O5 C16 DOUB N N 15 A1INN C16 O4 SING N N 16 A1INN C24 C23 SING N N 17 A1INN C24 C29 SING N N 18 A1INN C23 C4 SING N N 19 A1INN C28 C29 SING N N 20 A1INN O4 C15 SING N N 21 A1INN C4 C5 DOUB Y N 22 A1INN C4 C3 SING Y N 23 A1INN C5 C6 SING Y N 24 A1INN C15 C14 SING N N 25 A1INN C14 C13 SING N N 26 A1INN C3 C2 DOUB Y N 27 A1INN C13 C12 DOUB Y N 28 A1INN C13 N2 SING Y N 29 A1INN C7 O2 SING N N 30 A1INN C12 N1 SING Y N 31 A1INN C6 O2 SING N N 32 A1INN C6 C8 DOUB Y N 33 A1INN N2 N3 DOUB Y N 34 A1INN C2 C8 SING Y N 35 A1INN C2 O1 SING N N 36 A1INN N1 N3 SING Y N 37 A1INN N1 C11 SING N N 38 A1INN C8 O3 SING N N 39 A1INN C1 O1 SING N N 40 A1INN C11 C10 SING N N 41 A1INN O3 C9 SING N N 42 A1INN C9 C10 SING N N 43 A1INN C14 H17 SING N N 44 A1INN C14 H16 SING N N 45 A1INN C5 H5 SING N N 46 A1INN C11 H14 SING N N 47 A1INN C11 H13 SING N N 48 A1INN C7 H7 SING N N 49 A1INN C7 H8 SING N N 50 A1INN C7 H6 SING N N 51 A1INN C9 H9 SING N N 52 A1INN C9 H10 SING N N 53 A1INN C10 H12 SING N N 54 A1INN C10 H11 SING N N 55 A1INN C12 H15 SING N N 56 A1INN C3 H4 SING N N 57 A1INN C1 H2 SING N N 58 A1INN C1 H3 SING N N 59 A1INN C1 H1 SING N N 60 A1INN C15 H19 SING N N 61 A1INN C15 H18 SING N N 62 A1INN C17 H20 SING N N 63 A1INN C18 H22 SING N N 64 A1INN C18 H21 SING N N 65 A1INN C19 H23 SING N N 66 A1INN C19 H24 SING N N 67 A1INN C20 H25 SING N N 68 A1INN C20 H26 SING N N 69 A1INN C21 H27 SING N N 70 A1INN C21 H28 SING N N 71 A1INN C23 H29 SING N N 72 A1INN C24 H30 SING N N 73 A1INN C25 H32 SING N N 74 A1INN C25 H31 SING N N 75 A1INN C26 H33 SING N N 76 A1INN C26 H34 SING N N 77 A1INN C27 H35 SING N N 78 A1INN C27 H36 SING N N 79 A1INN C28 H37 SING N N 80 A1INN C28 H38 SING N N 81 A1INN C29 H40 SING N N 82 A1INN C29 H39 SING N N 83 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1INN InChI InChI 1.06 "InChI=1S/C29H40N4O6/c1-36-24-17-21-18-25(37-2)27(24)38-15-8-13-32-19-22(30-31-32)12-16-39-29(35)23-11-6-7-14-33(23)28(34)26(21)20-9-4-3-5-10-20/h17-20,23,26H,3-16H2,1-2H3/t23-,26-/m0/s1" A1INN InChIKey InChI 1.06 WLVDUSVHWUVZCC-OZXSUGGESA-N A1INN SMILES_CANONICAL CACTVS 3.385 "COc1cc2cc(OC)c1OCCCn3cc(CCOC(=O)[C@@H]4CCCCN4C(=O)[C@H]2C5CCCCC5)nn3" A1INN SMILES CACTVS 3.385 "COc1cc2cc(OC)c1OCCCn3cc(CCOC(=O)[CH]4CCCCN4C(=O)[CH]2C5CCCCC5)nn3" A1INN SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1cc2cc(c1OCCCn3cc(nn3)CCOC(=O)[C@@H]4CCCCN4C(=O)[C@H]2C5CCCCC5)OC" A1INN SMILES "OpenEye OEToolkits" 2.0.7 "COc1cc2cc(c1OCCCn3cc(nn3)CCOC(=O)C4CCCCN4C(=O)C2C5CCCCC5)OC" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1INN "Create component" 2024-09-11 PDBE A1INN "Initial release" 2025-01-15 RCSB #