data_A1INO # _chem_comp.id A1INO _chem_comp.name "3-cyclohexyl-19,20-dimethoxy-19-methyl-11,20-dioxa-5-aza-1lambda5-polona-1,19lambda5-dithia-18-azanida-1lambda5-stannapentacyclo[19.2.1.05,10.013,18.018,22]tetracosane-4,12-quinone" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C31 H44 N4 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-09-11 _chem_comp.pdbx_modified_date 2025-01-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 568.704 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1INO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9GPP _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1INO C4 C1 C 0 1 Y N N N N N -18.154 -3.678 12.900 1.929 1.041 0.475 C4 A1INO 1 A1INO C14 C2 C 0 1 Y N N N N N -20.944 -0.124 14.899 -5.824 -0.768 -0.055 C14 A1INO 2 A1INO C5 C3 C 0 1 Y N N N N N -19.379 -3.877 13.510 0.679 1.328 -0.041 C5 A1INO 3 A1INO C6 C4 C 0 1 Y N N N N N -19.505 -3.799 14.890 0.270 2.645 -0.200 C6 A1INO 4 A1INO C11 C5 C 0 1 N N N N N N -23.010 -3.997 15.672 -3.349 2.649 -0.640 C11 A1INO 5 A1INO C7 C6 C 0 1 Y N N N N N -18.406 -3.554 15.691 1.128 3.681 0.156 C7 A1INO 6 A1INO C8 C7 C 0 1 N N N N N N -18.851 -2.217 17.581 1.149 5.603 -1.246 C8 A1INO 7 A1INO C9 C8 C 0 1 N N S N N N -21.787 -4.604 14.989 -2.085 2.934 0.175 C9 A1INO 8 A1INO C10 C9 C 0 1 N N N N N N -21.531 -6.101 15.108 -2.207 4.304 0.847 C10 A1INO 9 A1INO C12 C10 C 0 1 N N N N N N -23.431 -2.719 14.953 -4.575 2.583 0.266 C12 A1INO 10 A1INO C13 C11 C 0 1 Y N N N N N -21.689 -1.023 14.195 -4.853 0.091 0.336 C13 A1INO 11 A1INO N1 N1 N 0 1 Y N N N N N -22.452 -1.638 15.116 -5.294 1.329 0.015 N1 A1INO 12 A1INO N2 N2 N 0 1 Y N N N N N -21.311 -0.198 16.197 -6.795 -0.023 -0.597 N2 A1INO 13 A1INO C3 C12 C 0 1 Y N N N N N -17.052 -3.398 13.694 2.764 2.072 0.867 C3 A1INO 14 A1INO N3 N3 N 0 1 Y N N N N N -22.210 -1.137 16.341 -6.449 1.216 -0.538 N3 A1INO 15 A1INO C1 C13 C 0 1 N N N N N N -14.901 -2.723 15.445 4.471 4.034 1.617 C1 A1INO 16 A1INO O1 O1 O 0 1 N N N N N N -16.168 -3.096 15.955 3.205 4.403 1.066 O1 A1INO 17 A1INO C2 C14 C 0 1 Y N N N N N -17.180 -3.340 15.080 2.372 3.389 0.700 C2 A1INO 18 A1INO O2 O2 O 0 1 N N N N N N -18.544 -3.508 17.069 0.752 4.977 -0.025 O2 A1INO 19 A1INO O3 O3 O 0 1 N N N N N N -20.644 -3.989 15.623 -0.958 2.930 -0.701 O3 A1INO 20 A1INO C15 C15 C 0 1 N N N N N N -19.916 0.844 14.444 -5.815 -2.267 0.096 C15 A1INO 21 A1INO C16 C16 C 0 1 N N N N N N -18.497 0.376 14.756 -4.616 -2.854 -0.651 C16 A1INO 22 A1INO C17 C17 C 0 1 N N N N N N -17.485 0.956 13.788 -3.450 -3.056 0.320 C17 A1INO 23 A1INO O4 O4 O 0 1 N N N N N N -17.579 0.178 12.562 -2.200 -3.019 -0.416 O4 A1INO 24 A1INO C18 C18 C 0 1 N N N N N N -17.182 0.748 11.422 -1.085 -3.383 0.244 C18 A1INO 25 A1INO O5 O5 O 0 1 N N N N N N -16.692 1.837 11.326 -1.156 -3.731 1.399 O5 A1INO 26 A1INO C19 C19 C 0 1 N N S N N N -17.505 -0.133 10.220 0.238 -3.345 -0.473 C19 A1INO 27 A1INO C20 C20 C 0 1 N N N N N N -18.376 0.685 9.261 0.779 -4.753 -0.679 C20 A1INO 28 A1INO C21 C21 C 0 1 N N N N N N -19.754 0.936 9.791 1.258 -5.354 0.642 C21 A1INO 29 A1INO C22 C22 C 0 1 N N N N N N -20.434 -0.387 9.963 2.370 -4.475 1.219 C22 A1INO 30 A1INO C23 C23 C 0 1 N N N N N N -19.642 -1.385 10.842 1.804 -3.079 1.496 C23 A1INO 31 A1INO N4 N4 N 0 1 N N N N N N -18.159 -1.408 10.576 1.204 -2.539 0.280 N4 A1INO 32 A1INO C24 C24 C 0 1 N N N N N N -17.400 -2.506 10.832 1.533 -1.315 -0.184 C24 A1INO 33 A1INO O6 O6 O 0 1 N N N N N N -16.179 -2.446 10.775 1.131 -0.975 -1.283 O6 A1INO 34 A1INO C25 C25 C 0 1 N N S N N N -17.998 -3.801 11.393 2.408 -0.383 0.604 C25 A1INO 35 A1INO C26 C26 C 0 1 N N N N N N -17.100 -5.012 11.008 3.843 -0.485 0.072 C26 A1INO 36 A1INO C27 C27 C 0 1 N N N N N N -17.114 -5.270 9.495 3.862 -0.127 -1.415 C27 A1INO 37 A1INO C28 C28 C 0 1 N N N N N N -16.253 -6.448 9.125 5.294 -0.229 -1.946 C28 A1INO 38 A1INO C29 C29 C 0 1 N N N N N N -16.760 -7.724 9.773 5.806 -1.658 -1.759 C29 A1INO 39 A1INO C30 C30 C 0 1 N N N N N N -16.738 -7.563 11.284 5.787 -2.017 -0.271 C30 A1INO 40 A1INO C31 C31 C 0 1 N N N N N N -17.508 -6.295 11.740 4.355 -1.915 0.259 C31 A1INO 41 A1INO H5 H1 H 0 1 N N N N N N -20.247 -4.096 12.906 0.010 0.528 -0.320 H5 A1INO 42 A1INO H14 H2 H 0 1 N N N N N N -22.763 -3.762 16.718 -3.486 3.443 -1.378 H14 A1INO 43 A1INO H13 H3 H 0 1 N N N N N N -23.839 -4.720 15.644 -3.232 1.698 -1.161 H13 A1INO 44 A1INO H7 H4 H 0 1 N N N N N N -18.943 -2.269 18.676 0.861 6.654 -1.226 H7 A1INO 45 A1INO H8 H5 H 0 1 N N N N N N -18.047 -1.516 17.313 2.230 5.525 -1.360 H8 A1INO 46 A1INO H6 H6 H 0 1 N N N N N N -19.801 -1.868 17.149 0.659 5.108 -2.085 H6 A1INO 47 A1INO H9 H7 H 0 1 N N N N N N -21.810 -4.334 13.923 -1.958 2.165 0.935 H9 A1INO 48 A1INO H11 H8 H 0 1 N N N N N N -22.362 -6.654 14.646 -2.410 5.063 0.091 H11 A1INO 49 A1INO H12 H9 H 0 1 N N N N N N -20.592 -6.354 14.594 -3.023 4.283 1.569 H12 A1INO 50 A1INO H10 H10 H 0 1 N N N N N N -21.454 -6.376 16.170 -1.275 4.542 1.360 H10 A1INO 51 A1INO H16 H11 H 0 1 N N N N N N -24.397 -2.386 15.361 -4.278 2.616 1.314 H16 A1INO 52 A1INO H15 H12 H 0 1 N N N N N N -23.542 -2.937 13.880 -5.236 3.424 0.048 H15 A1INO 53 A1INO H17 H13 H 0 1 N N N N N N -21.670 -1.202 13.130 -3.915 -0.159 0.806 H17 A1INO 54 A1INO H4 H14 H 0 1 N N N N N N -16.090 -3.224 13.236 3.719 1.865 1.330 H4 A1INO 55 A1INO H2 H15 H 0 1 N N N N N N -14.202 -2.564 16.279 5.028 3.447 0.888 H2 A1INO 56 A1INO H3 H16 H 0 1 N N N N N N -14.518 -3.522 14.793 5.034 4.934 1.866 H3 A1INO 57 A1INO H1 H17 H 0 1 N N N N N N -14.998 -1.793 14.866 4.316 3.442 2.519 H1 A1INO 58 A1INO H19 H18 H 0 1 N N N N N N -20.089 1.806 14.948 -5.742 -2.524 1.153 H19 A1INO 59 A1INO H18 H19 H 0 1 N N N N N N -20.013 0.977 13.356 -6.737 -2.680 -0.313 H18 A1INO 60 A1INO H21 H20 H 0 1 N N N N N N -18.462 -0.722 14.692 -4.897 -3.818 -1.082 H21 A1INO 61 A1INO H20 H21 H 0 1 N N N N N N -18.235 0.692 15.776 -4.315 -2.177 -1.449 H20 A1INO 62 A1INO H23 H22 H 0 1 N N N N N N -16.472 0.878 14.209 -3.455 -2.257 1.064 H23 A1INO 63 A1INO H22 H23 H 0 1 N N N N N N -17.718 2.012 13.585 -3.553 -4.018 0.818 H22 A1INO 64 A1INO H24 H24 H 0 1 N N N N N N -16.560 -0.359 9.704 0.087 -2.878 -1.454 H24 A1INO 65 A1INO H26 H25 H 0 1 N N N N N N -18.460 0.137 8.311 -0.004 -5.383 -1.102 H26 A1INO 66 A1INO H25 H26 H 0 1 N N N N N N -17.887 1.654 9.084 1.618 -4.712 -1.377 H25 A1INO 67 A1INO H27 H27 H 0 1 N N N N N N -19.692 1.452 10.760 0.428 -5.409 1.346 H27 A1INO 68 A1INO H28 H28 H 0 1 N N N N N N -20.320 1.556 9.080 1.646 -6.358 0.461 H28 A1INO 69 A1INO H29 H29 H 0 1 N N N N N N -21.415 -0.215 10.431 2.734 -4.912 2.149 H29 A1INO 70 A1INO H30 H30 H 0 1 N N N N N N -20.575 -0.836 8.969 3.188 -4.403 0.503 H30 A1INO 71 A1INO H31 H31 H 0 1 N N N N N N -19.798 -1.114 11.897 1.044 -3.152 2.276 H31 A1INO 72 A1INO H32 H32 H 0 1 N N N N N N -20.040 -2.394 10.660 2.609 -2.436 1.842 H32 A1INO 73 A1INO H33 H33 H 0 1 N N N N N N -18.992 -3.951 10.946 2.396 -0.664 1.657 H33 A1INO 74 A1INO H34 H34 H 0 1 N N N N N N -16.068 -4.769 11.300 4.484 0.205 0.621 H34 A1INO 75 A1INO H36 H35 H 0 1 N N N N N N -16.737 -4.376 8.977 3.221 -0.817 -1.963 H36 A1INO 76 A1INO H35 H36 H 0 1 N N N N N N -18.148 -5.470 9.177 3.497 0.892 -1.548 H35 A1INO 77 A1INO H37 H37 H 0 1 N N N N N N -16.265 -6.572 8.032 5.307 0.026 -3.005 H37 A1INO 78 A1INO H38 H38 H 0 1 N N N N N N -15.223 -6.259 9.462 5.935 0.461 -1.397 H38 A1INO 79 A1INO H39 H39 H 0 1 N N N N N N -17.789 -7.922 9.439 5.165 -2.349 -2.307 H39 A1INO 80 A1INO H40 H40 H 0 1 N N N N N N -16.113 -8.565 9.484 6.826 -1.731 -2.137 H40 A1INO 81 A1INO H41 H41 H 0 1 N N N N N N -17.204 -8.447 11.743 6.152 -3.035 -0.138 H41 A1INO 82 A1INO H42 H42 H 0 1 N N N N N N -15.693 -7.484 11.618 6.428 -1.327 0.277 H42 A1INO 83 A1INO H44 H43 H 0 1 N N N N N N -17.327 -6.150 12.815 4.341 -2.170 1.319 H44 A1INO 84 A1INO H43 H44 H 0 1 N N N N N N -18.581 -6.463 11.568 3.714 -2.605 -0.289 H43 A1INO 85 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1INO C28 C27 SING N N 1 A1INO C28 C29 SING N N 2 A1INO C20 C21 SING N N 3 A1INO C20 C19 SING N N 4 A1INO C27 C26 SING N N 5 A1INO C29 C30 SING N N 6 A1INO C21 C22 SING N N 7 A1INO C22 C23 SING N N 8 A1INO C19 N4 SING N N 9 A1INO C19 C18 SING N N 10 A1INO N4 C24 SING N N 11 A1INO N4 C23 SING N N 12 A1INO O6 C24 DOUB N N 13 A1INO C24 C25 SING N N 14 A1INO C26 C25 SING N N 15 A1INO C26 C31 SING N N 16 A1INO C30 C31 SING N N 17 A1INO O5 C18 DOUB N N 18 A1INO C25 C4 SING N N 19 A1INO C18 O4 SING N N 20 A1INO O4 C17 SING N N 21 A1INO C4 C5 DOUB Y N 22 A1INO C4 C3 SING Y N 23 A1INO C5 C6 SING Y N 24 A1INO C3 C2 DOUB Y N 25 A1INO C17 C16 SING N N 26 A1INO C13 C14 DOUB Y N 27 A1INO C13 N1 SING Y N 28 A1INO C15 C16 SING N N 29 A1INO C15 C14 SING N N 30 A1INO C6 O3 SING N N 31 A1INO C6 C7 DOUB Y N 32 A1INO C14 N2 SING Y N 33 A1INO C12 N1 SING N N 34 A1INO C12 C11 SING N N 35 A1INO C9 C10 SING N N 36 A1INO C9 O3 SING N N 37 A1INO C9 C11 SING N N 38 A1INO C2 C7 SING Y N 39 A1INO C2 O1 SING N N 40 A1INO N1 N3 SING Y N 41 A1INO C1 O1 SING N N 42 A1INO C7 O2 SING N N 43 A1INO N2 N3 DOUB Y N 44 A1INO O2 C8 SING N N 45 A1INO C5 H5 SING N N 46 A1INO C11 H14 SING N N 47 A1INO C11 H13 SING N N 48 A1INO C8 H7 SING N N 49 A1INO C8 H8 SING N N 50 A1INO C8 H6 SING N N 51 A1INO C9 H9 SING N N 52 A1INO C10 H11 SING N N 53 A1INO C10 H12 SING N N 54 A1INO C10 H10 SING N N 55 A1INO C12 H16 SING N N 56 A1INO C12 H15 SING N N 57 A1INO C13 H17 SING N N 58 A1INO C3 H4 SING N N 59 A1INO C1 H2 SING N N 60 A1INO C1 H3 SING N N 61 A1INO C1 H1 SING N N 62 A1INO C15 H19 SING N N 63 A1INO C15 H18 SING N N 64 A1INO C16 H21 SING N N 65 A1INO C16 H20 SING N N 66 A1INO C17 H23 SING N N 67 A1INO C17 H22 SING N N 68 A1INO C19 H24 SING N N 69 A1INO C20 H26 SING N N 70 A1INO C20 H25 SING N N 71 A1INO C21 H27 SING N N 72 A1INO C21 H28 SING N N 73 A1INO C22 H29 SING N N 74 A1INO C22 H30 SING N N 75 A1INO C23 H31 SING N N 76 A1INO C23 H32 SING N N 77 A1INO C25 H33 SING N N 78 A1INO C26 H34 SING N N 79 A1INO C27 H36 SING N N 80 A1INO C27 H35 SING N N 81 A1INO C28 H37 SING N N 82 A1INO C28 H38 SING N N 83 A1INO C29 H39 SING N N 84 A1INO C29 H40 SING N N 85 A1INO C30 H41 SING N N 86 A1INO C30 H42 SING N N 87 A1INO C31 H44 SING N N 88 A1INO C31 H43 SING N N 89 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1INO InChI InChI 1.06 "InChI=1S/C31H44N4O6/c1-21-14-16-34-20-24(32-33-34)12-9-17-40-31(37)25-13-7-8-15-35(25)30(36)28(22-10-5-4-6-11-22)23-18-26(38-2)29(39-3)27(19-23)41-21/h18-22,25,28H,4-17H2,1-3H3/t21-,25-,28-/m0/s1" A1INO InChIKey InChI 1.06 YQIADJASNGMGCE-QLADTWODSA-N A1INO SMILES_CANONICAL CACTVS 3.385 "COc1cc2cc(O[C@@H](C)CCn3cc(CCCOC(=O)[C@@H]4CCCCN4C(=O)[C@H]2C5CCCCC5)nn3)c1OC" A1INO SMILES CACTVS 3.385 "COc1cc2cc(O[CH](C)CCn3cc(CCCOC(=O)[CH]4CCCCN4C(=O)[CH]2C5CCCCC5)nn3)c1OC" A1INO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H]1CCn2cc(nn2)CCCOC(=O)[C@@H]3CCCCN3C(=O)[C@H](c4cc(c(c(c4)OC)OC)O1)C5CCCCC5" A1INO SMILES "OpenEye OEToolkits" 2.0.7 "CC1CCn2cc(nn2)CCCOC(=O)C3CCCCN3C(=O)C(c4cc(c(c(c4)OC)OC)O1)C5CCCCC5" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1INO "Create component" 2024-09-11 PDBE A1INO "Initial release" 2025-01-15 RCSB #