data_A1INV # _chem_comp.id A1INV _chem_comp.name "3-cyclohexyl-19,20-dimethoxy-19-methyl-11,20-dioxa-5-aza-1lambda5-polona-1,19lambda5-dithia-18-azanida-1lambda5-stannapentacyclo[19.2.1.05,10.013,18.018,22]tetracosane-4,12-quinone" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C31 H44 N4 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-09-11 _chem_comp.pdbx_modified_date 2025-01-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 568.704 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1INV _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9GPS _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1INV C4 C1 C 0 1 Y N N N N N -18.105 -3.572 12.925 2.029 1.094 0.307 C4 A1INV 1 A1INV C14 C2 C 0 1 Y N N N N N -20.244 1.071 14.428 -5.863 -0.719 -0.079 C14 A1INV 2 A1INV C5 C3 C 0 1 Y N N N N N -19.313 -3.861 13.566 0.817 1.346 -0.302 C5 A1INV 3 A1INV C6 C4 C 0 1 Y N N N N N -19.451 -3.771 14.951 0.358 2.649 -0.447 C6 A1INV 4 A1INV C11 C5 C 0 1 N N N N N N -22.430 -2.668 14.817 -3.149 2.275 -1.072 C11 A1INV 5 A1INV C7 C6 C 0 1 Y N N N N N -18.357 -3.376 15.723 1.128 3.707 0.026 C7 A1INV 6 A1INV C8 C7 C 0 1 N N N N N N -18.611 -1.983 17.660 -0.109 5.520 0.945 C8 A1INV 7 A1INV C9 C8 C 0 1 N N R N N N -21.636 -3.160 15.993 -2.026 2.963 -0.291 C9 A1INV 8 A1INV C10 C9 C 0 1 N N N N N N -22.597 -3.825 16.965 -1.831 2.268 1.057 C10 A1INV 9 A1INV C12 C10 C 0 1 N N N N N N -22.905 -1.275 15.039 -4.507 2.587 -0.448 C12 A1INV 10 A1INV C13 C11 C 0 1 Y N N N N N -21.327 0.388 13.948 -4.801 0.123 -0.075 C13 A1INV 11 A1INV N1 N1 N 0 1 Y N N N N N -21.805 -0.321 14.987 -5.293 1.355 -0.335 N1 A1INV 12 A1INV N2 N2 N 0 1 Y N N N N N -20.152 0.790 15.752 -6.941 0.034 -0.324 N2 A1INV 13 A1INV C3 C12 C 0 1 Y N N N N N -17.016 -3.180 13.692 2.791 2.148 0.785 C3 A1INV 14 A1INV N3 N3 N 0 1 Y N N N N N -21.084 -0.085 16.096 -6.570 1.258 -0.470 N3 A1INV 15 A1INV C1 C13 C 0 1 N N N N N N -14.834 -2.542 15.424 4.346 4.149 1.726 C1 A1INV 16 A1INV O1 O1 O 0 1 N N N N N N -16.144 -2.741 15.936 3.103 4.484 1.104 O1 A1INV 17 A1INV C2 C14 C 0 1 Y N N N N N -17.151 -3.060 15.085 2.346 3.453 0.642 C2 A1INV 18 A1INV O2 O2 O 0 1 N N N N N N -18.471 -3.321 17.095 0.688 4.987 -0.115 O2 A1INV 19 A1INV O3 O3 O 0 1 N N N N N N -20.611 -4.111 15.632 -0.826 2.899 -1.058 O3 A1INV 20 A1INV C15 C15 C 0 1 N N N N N N -19.370 2.074 13.745 -5.826 -2.208 0.146 C15 A1INV 21 A1INV C16 C16 C 0 1 N N N N N N -17.884 2.027 14.117 -4.594 -2.800 -0.539 C16 A1INV 22 A1INV C17 C17 C 0 1 N N N N N N -17.163 0.753 13.782 -3.432 -2.876 0.456 C17 A1INV 23 A1INV O4 O4 O 0 1 N N N N N N -17.545 0.176 12.490 -2.178 -2.895 -0.275 O4 A1INV 24 A1INV C18 C18 C 0 1 N N N N N N -17.084 0.751 11.386 -1.068 -3.223 0.410 C18 A1INV 25 A1INV O5 O5 O 0 1 N N N N N N -16.616 1.852 11.342 -1.139 -3.467 1.591 O5 A1INV 26 A1INV C19 C19 C 0 1 N N S N N N -17.428 -0.111 10.171 0.249 -3.282 -0.319 C19 A1INV 27 A1INV C20 C20 C 0 1 N N N N N N -18.360 0.695 9.262 0.760 -4.717 -0.383 C20 A1INV 28 A1INV C21 C21 C 0 1 N N N N N N -19.746 0.874 9.766 1.195 -5.202 0.998 C21 A1INV 29 A1INV C22 C22 C 0 1 N N N N N N -20.371 -0.475 9.958 2.306 -4.297 1.533 C22 A1INV 30 A1INV C23 C23 C 0 1 N N N N N N -19.526 -1.384 10.864 1.778 -2.864 1.648 C23 A1INV 31 A1INV N4 N4 N 0 1 N N N N N N -18.072 -1.381 10.540 1.240 -2.437 0.359 N4 A1INV 32 A1INV C24 C24 C 0 1 N N N N N N -17.296 -2.436 10.816 1.648 -1.298 -0.234 C24 A1INV 33 A1INV O6 O6 O 0 1 N N N N N N -16.090 -2.307 10.767 1.306 -1.078 -1.383 O6 A1INV 34 A1INV C25 C25 C 0 1 N N S N N N -17.941 -3.695 11.404 2.539 -0.315 0.469 C25 A1INV 35 A1INV C26 C26 C 0 1 N N N N N N -17.099 -4.943 11.048 3.950 -0.410 -0.123 C26 A1INV 36 A1INV C27 C27 C 0 1 N N N N N N -17.067 -5.183 9.533 3.901 -0.071 -1.614 C27 A1INV 37 A1INV C28 C28 C 0 1 N N N N N N -16.305 -6.427 9.164 5.309 -0.166 -2.205 C28 A1INV 38 A1INV C29 C29 C 0 1 N N N N N N -16.769 -7.689 9.880 5.844 -1.587 -2.022 C29 A1INV 39 A1INV C30 C30 C 0 1 N N N N N N -16.726 -7.451 11.379 5.893 -1.926 -0.531 C30 A1INV 40 A1INV C31 C31 C 0 1 N N N N N N -17.581 -6.205 11.742 4.485 -1.831 0.060 C31 A1INV 41 A1INV H5 H1 H 0 1 N N N N N N -20.163 -4.162 12.972 0.207 0.532 -0.665 H5 A1INV 42 A1INV H14 H2 H 0 1 N N N N N N -23.300 -3.325 14.670 -3.136 2.634 -2.105 H14 A1INV 43 A1INV H13 H3 H 0 1 N N N N N N -21.795 -2.693 13.919 -2.978 1.199 -1.073 H13 A1INV 44 A1INV H7 H4 H 0 1 N N N N N N -18.694 -2.053 18.755 -0.393 6.545 0.706 H7 A1INV 45 A1INV H8 H5 H 0 1 N N N N N N -17.729 -1.380 17.397 -1.007 4.913 1.065 H8 A1INV 46 A1INV H6 H6 H 0 1 N N N N N N -19.515 -1.506 17.254 0.465 5.508 1.872 H6 A1INV 47 A1INV H9 H7 H 0 1 N N N N N N -21.175 -2.296 16.494 -2.293 4.008 -0.124 H9 A1INV 48 A1INV H12 H8 H 0 1 N N N N N N -22.039 -4.195 17.838 -1.568 1.223 0.892 H12 A1INV 49 A1INV H10 H9 H 0 1 N N N N N N -23.350 -3.094 17.294 -1.031 2.762 1.608 H10 A1INV 50 A1INV H11 H10 H 0 1 N N N N N N -23.098 -4.668 16.466 -2.756 2.324 1.631 H11 A1INV 51 A1INV H15 H11 H 0 1 N N N N N N -23.638 -1.019 14.259 -4.384 3.033 0.536 H15 A1INV 52 A1INV H16 H12 H 0 1 N N N N N N -23.385 -1.214 16.027 -5.043 3.291 -1.090 H16 A1INV 53 A1INV H17 H13 H 0 1 N N N N N N -21.718 0.413 12.942 -3.769 -0.142 0.101 H17 A1INV 54 A1INV H4 H14 H 0 1 N N N N N N -16.068 -2.968 13.219 3.732 1.959 1.280 H4 A1INV 55 A1INV H2 H15 H 0 1 N N N N N N -14.151 -2.293 16.249 4.977 3.618 1.013 H2 A1INV 56 A1INV H3 H16 H 0 1 N N N N N N -14.490 -3.462 14.929 4.848 5.061 2.048 H3 A1INV 57 A1INV H1 H17 H 0 1 N N N N N N -14.846 -1.717 14.696 4.159 3.512 2.591 H1 A1INV 58 A1INV H19 H18 H 0 1 N N N N N N -19.749 3.076 13.994 -5.781 -2.413 1.215 H19 A1INV 59 A1INV H18 H19 H 0 1 N N N N N N -19.452 1.910 12.660 -6.725 -2.660 -0.272 H18 A1INV 60 A1INV H20 H20 H 0 1 N N N N N N -17.378 2.849 13.589 -4.827 -3.803 -0.900 H20 A1INV 61 A1INV H21 H21 H 0 1 N N N N N N -17.803 2.184 15.203 -4.309 -2.171 -1.382 H21 A1INV 62 A1INV H23 H22 H 0 1 N N N N N N -17.380 0.015 14.568 -3.457 -2.008 1.114 H23 A1INV 63 A1INV H22 H23 H 0 1 N N N N N N -16.083 0.961 13.763 -3.521 -3.786 1.049 H22 A1INV 64 A1INV H24 H24 H 0 1 N N N N N N -16.500 -0.322 9.619 0.104 -2.912 -1.338 H24 A1INV 65 A1INV H26 H25 H 0 1 N N N N N N -18.416 0.180 8.292 -0.033 -5.365 -0.759 H26 A1INV 66 A1INV H25 H26 H 0 1 N N N N N N -17.918 1.693 9.123 1.611 -4.764 -1.064 H25 A1INV 67 A1INV H27 H27 H 0 1 N N N N N N -19.723 1.410 10.726 0.346 -5.185 1.680 H27 A1INV 68 A1INV H28 H28 H 0 1 N N N N N N -20.332 1.452 9.037 1.570 -6.225 0.919 H28 A1INV 69 A1INV H29 H29 H 0 1 N N N N N N -21.363 -0.344 10.415 2.622 -4.647 2.516 H29 A1INV 70 A1INV H30 H30 H 0 1 N N N N N N -20.480 -0.958 8.976 3.155 -4.316 0.849 H30 A1INV 71 A1INV H31 H31 H 0 1 N N N N N N -19.649 -1.047 11.904 0.989 -2.832 2.401 H31 A1INV 72 A1INV H32 H32 H 0 1 N N N N N N -19.900 -2.414 10.766 2.594 -2.214 1.955 H32 A1INV 73 A1INV H33 H33 H 0 1 N N N N N N -18.939 -3.815 10.957 2.584 -0.545 1.534 H33 A1INV 74 A1INV H34 H34 H 0 1 N N N N N N -16.067 -4.751 11.377 4.607 0.294 0.389 H34 A1INV 75 A1INV H36 H35 H 0 1 N N N N N N -16.588 -4.319 9.049 3.244 -0.775 -2.125 H36 A1INV 76 A1INV H35 H36 H 0 1 N N N N N N -18.100 -5.281 9.169 3.520 0.942 -1.744 H35 A1INV 77 A1INV H37 H37 H 0 1 N N N N N N -16.413 -6.587 8.081 5.274 0.076 -3.267 H37 A1INV 78 A1INV H38 H38 H 0 1 N N N N N N -15.244 -6.265 9.407 5.966 0.538 -1.694 H38 A1INV 79 A1INV H39 H39 H 0 1 N N N N N N -17.798 -7.929 9.574 5.187 -2.291 -2.533 H39 A1INV 80 A1INV H40 H40 H 0 1 N N N N N N -16.104 -8.526 9.620 6.847 -1.655 -2.443 H40 A1INV 81 A1INV H41 H41 H 0 1 N N N N N N -17.127 -8.333 11.900 6.274 -2.939 -0.401 H41 A1INV 82 A1INV H42 H42 H 0 1 N N N N N N -15.685 -7.283 11.692 6.550 -1.222 -0.020 H42 A1INV 83 A1INV H44 H43 H 0 1 N N N N N N -17.532 -6.049 12.830 4.520 -2.073 1.122 H44 A1INV 84 A1INV H43 H44 H 0 1 N N N N N N -18.623 -6.394 11.445 3.828 -2.535 -0.451 H43 A1INV 85 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1INV C28 C27 SING N N 1 A1INV C28 C29 SING N N 2 A1INV C20 C21 SING N N 3 A1INV C20 C19 SING N N 4 A1INV C27 C26 SING N N 5 A1INV C21 C22 SING N N 6 A1INV C29 C30 SING N N 7 A1INV C22 C23 SING N N 8 A1INV C19 N4 SING N N 9 A1INV C19 C18 SING N N 10 A1INV N4 C24 SING N N 11 A1INV N4 C23 SING N N 12 A1INV O6 C24 DOUB N N 13 A1INV C24 C25 SING N N 14 A1INV C26 C25 SING N N 15 A1INV C26 C31 SING N N 16 A1INV O5 C18 DOUB N N 17 A1INV C30 C31 SING N N 18 A1INV C18 O4 SING N N 19 A1INV C25 C4 SING N N 20 A1INV O4 C17 SING N N 21 A1INV C4 C5 DOUB Y N 22 A1INV C4 C3 SING Y N 23 A1INV C5 C6 SING Y N 24 A1INV C3 C2 DOUB Y N 25 A1INV C15 C16 SING N N 26 A1INV C15 C14 SING N N 27 A1INV C17 C16 SING N N 28 A1INV C13 C14 DOUB Y N 29 A1INV C13 N1 SING Y N 30 A1INV C14 N2 SING Y N 31 A1INV C11 C12 SING N N 32 A1INV C11 C9 SING N N 33 A1INV C6 O3 SING N N 34 A1INV C6 C7 DOUB Y N 35 A1INV N1 C12 SING N N 36 A1INV N1 N3 SING Y N 37 A1INV C2 C7 SING Y N 38 A1INV C2 O1 SING N N 39 A1INV C1 O1 SING N N 40 A1INV O3 C9 SING N N 41 A1INV C7 O2 SING N N 42 A1INV N2 N3 DOUB Y N 43 A1INV C9 C10 SING N N 44 A1INV O2 C8 SING N N 45 A1INV C5 H5 SING N N 46 A1INV C11 H14 SING N N 47 A1INV C11 H13 SING N N 48 A1INV C8 H7 SING N N 49 A1INV C8 H8 SING N N 50 A1INV C8 H6 SING N N 51 A1INV C9 H9 SING N N 52 A1INV C10 H12 SING N N 53 A1INV C10 H10 SING N N 54 A1INV C10 H11 SING N N 55 A1INV C12 H15 SING N N 56 A1INV C12 H16 SING N N 57 A1INV C13 H17 SING N N 58 A1INV C3 H4 SING N N 59 A1INV C1 H2 SING N N 60 A1INV C1 H3 SING N N 61 A1INV C1 H1 SING N N 62 A1INV C15 H19 SING N N 63 A1INV C15 H18 SING N N 64 A1INV C16 H20 SING N N 65 A1INV C16 H21 SING N N 66 A1INV C17 H23 SING N N 67 A1INV C17 H22 SING N N 68 A1INV C19 H24 SING N N 69 A1INV C20 H26 SING N N 70 A1INV C20 H25 SING N N 71 A1INV C21 H27 SING N N 72 A1INV C21 H28 SING N N 73 A1INV C22 H29 SING N N 74 A1INV C22 H30 SING N N 75 A1INV C23 H31 SING N N 76 A1INV C23 H32 SING N N 77 A1INV C25 H33 SING N N 78 A1INV C26 H34 SING N N 79 A1INV C27 H36 SING N N 80 A1INV C27 H35 SING N N 81 A1INV C28 H37 SING N N 82 A1INV C28 H38 SING N N 83 A1INV C29 H39 SING N N 84 A1INV C29 H40 SING N N 85 A1INV C30 H41 SING N N 86 A1INV C30 H42 SING N N 87 A1INV C31 H44 SING N N 88 A1INV C31 H43 SING N N 89 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1INV InChI InChI 1.06 "InChI=1S/C31H44N4O6/c1-21-14-16-34-20-24(32-33-34)12-9-17-40-31(37)25-13-7-8-15-35(25)30(36)28(22-10-5-4-6-11-22)23-18-26(38-2)29(39-3)27(19-23)41-21/h18-22,25,28H,4-17H2,1-3H3/t21-,25+,28+/m1/s1" A1INV InChIKey InChI 1.06 YQIADJASNGMGCE-ZNFSXRAMSA-N A1INV SMILES_CANONICAL CACTVS 3.385 "COc1cc2cc(O[C@H](C)CCn3cc(CCCOC(=O)[C@@H]4CCCCN4C(=O)[C@H]2C5CCCCC5)nn3)c1OC" A1INV SMILES CACTVS 3.385 "COc1cc2cc(O[CH](C)CCn3cc(CCCOC(=O)[CH]4CCCCN4C(=O)[CH]2C5CCCCC5)nn3)c1OC" A1INV SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H]1CCn2cc(nn2)CCCOC(=O)[C@@H]3CCCCN3C(=O)[C@H](c4cc(c(c(c4)OC)OC)O1)C5CCCCC5" A1INV SMILES "OpenEye OEToolkits" 2.0.7 "CC1CCn2cc(nn2)CCCOC(=O)C3CCCCN3C(=O)C(c4cc(c(c(c4)OC)OC)O1)C5CCCCC5" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1INV "Create component" 2024-09-11 PDBE A1INV "Initial release" 2025-01-15 RCSB #