data_A1IOZ # _chem_comp.id A1IOZ _chem_comp.name "7-[(3~{S},4~{S},6~{R})-1-[3-(aminomethyl)phenyl]carbonyl-4-methyl-4,6-bis(oxidanyl)azepan-3-yl]-1,3-dimethyl-purine-2,6-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H28 N6 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-09-19 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 456.495 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1IOZ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9GUF _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1IOZ C10 C1 C 0 1 Y N N N N N 84.198 -30.874 16.980 -1.131 2.066 1.099 C10 A1IOZ 1 A1IOZ C12 C2 C 0 1 N N N N N N 83.024 -30.372 14.844 -0.015 3.717 2.555 C12 A1IOZ 2 A1IOZ C13 C3 C 0 1 N N S N N N 85.830 -32.003 20.027 -2.766 -0.384 -1.046 C13 A1IOZ 3 A1IOZ C16 C4 C 0 1 N N N N N N 85.162 -32.711 22.347 -2.949 -1.891 1.007 C16 A1IOZ 4 A1IOZ C17 C5 C 0 1 N N R N N N 86.582 -32.728 22.933 -1.426 -1.826 1.123 C17 A1IOZ 5 A1IOZ C19 C6 C 0 1 N N N N N N 87.688 -33.157 21.953 -0.736 -2.446 -0.068 C19 A1IOZ 6 A1IOZ C24 C7 C 0 1 Y N N N N N 90.825 -30.881 19.155 3.028 -1.447 -0.700 C24 A1IOZ 7 A1IOZ C25 C8 C 0 1 Y N N N N N 91.333 -29.894 18.316 4.031 -1.801 0.179 C25 A1IOZ 8 A1IOZ C26 C9 C 0 1 Y N N N N N 90.993 -28.556 18.517 3.769 -1.888 1.535 C26 A1IOZ 9 A1IOZ C27 C10 C 0 1 Y N N N N N 90.143 -28.207 19.561 2.500 -1.621 2.019 C27 A1IOZ 10 A1IOZ C31 C11 C 0 1 N N N N N N 87.242 -31.412 20.031 -1.576 -0.908 -1.894 C31 A1IOZ 11 A1IOZ C32 C12 C 0 1 N N N N N N 85.226 -30.253 21.820 -4.958 -1.263 -0.327 C32 A1IOZ 12 A1IOZ C33 C13 C 0 1 N N N N N N 84.981 -26.696 17.680 1.383 3.235 -2.072 C33 A1IOZ 13 A1IOZ C02 C14 C 0 1 N N N N N N 83.999 -28.484 16.247 0.615 3.404 0.224 C02 A1IOZ 14 A1IOZ C04 C15 C 0 1 N N N N N N 85.162 -29.070 18.379 -0.408 1.844 -1.195 C04 A1IOZ 15 A1IOZ C06 C16 C 0 1 Y N N N N N 84.873 -30.554 18.123 -1.256 1.447 -0.138 C06 A1IOZ 16 A1IOZ C08 C17 C 0 1 Y N N N N N 84.633 -32.716 18.018 -2.711 0.598 1.265 C08 A1IOZ 17 A1IOZ C14 C18 C 0 1 N N S N N N 84.942 -31.656 21.258 -3.460 -1.563 -0.406 C14 A1IOZ 18 A1IOZ C21 C19 C 0 1 N N N N N N 89.441 -31.638 21.118 0.668 -0.792 -1.153 C21 A1IOZ 19 A1IOZ C23 C20 C 0 1 Y N N N N N 89.977 -30.532 20.201 1.747 -1.177 -0.218 C23 A1IOZ 20 A1IOZ C28 C21 C 0 1 Y N N N N N 89.642 -29.194 20.405 1.488 -1.266 1.151 C28 A1IOZ 21 A1IOZ C29 C22 C 0 1 N N N N N N 92.264 -30.300 17.175 5.416 -2.094 -0.339 C29 A1IOZ 22 A1IOZ N03 N1 N 0 1 N N N N N N 84.715 -28.096 17.433 0.500 2.818 -0.980 N03 A1IOZ 23 A1IOZ N07 N2 N 0 1 Y N N N N N 85.141 -31.714 18.765 -2.268 0.518 -0.005 N07 A1IOZ 24 A1IOZ N09 N3 N 0 1 Y N N N N N 84.060 -32.180 16.926 -2.036 1.514 1.911 N09 A1IOZ 25 A1IOZ N11 N4 N 0 1 N N N N N N 83.733 -29.884 16.006 -0.172 3.054 1.259 N11 A1IOZ 26 A1IOZ N20 N5 N 0 1 N N N N N N 88.063 -32.094 21.024 -0.547 -1.366 -1.054 N20 A1IOZ 27 A1IOZ N30 N6 N 0 1 N N N N N N 92.755 -31.654 17.390 6.205 -0.855 -0.356 N30 A1IOZ 28 A1IOZ O01 O1 O 0 1 N N N N N N 83.634 -27.689 15.454 1.451 4.273 0.384 O01 A1IOZ 29 A1IOZ O05 O2 O 0 1 N N N N N N 85.754 -28.701 19.337 -0.503 1.321 -2.291 O05 A1IOZ 30 A1IOZ O15 O3 O 0 1 N N N N N N 83.599 -31.681 20.877 -3.271 -2.710 -1.238 O15 A1IOZ 31 A1IOZ O18 O4 O 0 1 N N N N N N 86.575 -33.651 24.006 -1.021 -2.521 2.305 O18 A1IOZ 32 A1IOZ O22 O5 O 0 1 N N N N N N 90.178 -32.132 21.905 0.878 0.043 -2.012 O22 A1IOZ 33 A1IOZ H122 H1 H 0 0 N N N N N N 82.738 -29.523 14.205 0.781 4.459 2.490 H122 A1IOZ 34 A1IOZ H123 H2 H 0 0 N N N N N N 83.675 -31.054 14.277 -0.948 4.209 2.827 H123 A1IOZ 35 A1IOZ H121 H3 H 0 0 N N N N N N 82.120 -30.910 15.165 0.240 2.977 3.314 H121 A1IOZ 36 A1IOZ H131 H4 H 0 0 N N N N N N 85.965 -33.094 20.063 -3.465 0.150 -1.689 H131 A1IOZ 37 A1IOZ H162 H5 H 0 0 N N N N N N 84.956 -33.701 21.914 -3.279 -2.895 1.275 H162 A1IOZ 38 A1IOZ H161 H6 H 0 0 N N N N N N 84.454 -32.514 23.165 -3.383 -1.181 1.711 H161 A1IOZ 39 A1IOZ H171 H7 H 0 0 N N N N N N 86.818 -31.720 23.304 -1.122 -0.783 1.205 H171 A1IOZ 40 A1IOZ H192 H8 H 0 0 N N N N N N 88.577 -33.448 22.532 0.230 -2.852 0.230 H192 A1IOZ 41 A1IOZ H191 H9 H 0 0 N N N N N N 87.329 -34.020 21.373 -1.359 -3.234 -0.492 H191 A1IOZ 42 A1IOZ H241 H10 H 0 0 N N N N N N 91.089 -31.916 18.994 3.236 -1.376 -1.757 H241 A1IOZ 43 A1IOZ H261 H11 H 0 0 N N N N N N 91.389 -27.793 17.863 4.558 -2.165 2.218 H261 A1IOZ 44 A1IOZ H271 H12 H 0 0 N N N N N N 89.872 -27.173 19.716 2.302 -1.691 3.078 H271 A1IOZ 45 A1IOZ H312 H13 H 0 0 N N N N N N 87.188 -30.341 20.276 -1.916 -1.726 -2.528 H312 A1IOZ 46 A1IOZ H311 H14 H 0 0 N N N N N N 87.693 -31.539 19.036 -1.197 -0.101 -2.522 H311 A1IOZ 47 A1IOZ H322 H15 H 0 0 N N N N N N 84.572 -30.064 22.684 -5.124 -0.413 0.334 H322 A1IOZ 48 A1IOZ H321 H16 H 0 0 N N N N N N 86.278 -30.191 22.136 -5.335 -1.028 -1.322 H321 A1IOZ 49 A1IOZ H323 H17 H 0 0 N N N N N N 85.031 -29.500 21.042 -5.483 -2.135 0.064 H323 A1IOZ 50 A1IOZ H333 H18 H 0 0 N N N N N N 85.534 -26.588 18.625 0.913 4.045 -2.630 H333 A1IOZ 51 A1IOZ H331 H19 H 0 0 N N N N N N 85.582 -26.286 16.855 2.332 3.580 -1.661 H331 A1IOZ 52 A1IOZ H332 H20 H 0 0 N N N N N N 84.029 -26.148 17.748 1.561 2.391 -2.738 H332 A1IOZ 53 A1IOZ H081 H21 H 0 0 N N N N N N 84.679 -33.768 18.256 -3.504 -0.002 1.686 H081 A1IOZ 54 A1IOZ H281 H22 H 0 0 N N N N N N 88.990 -28.922 21.222 0.499 -1.058 1.530 H281 A1IOZ 55 A1IOZ H292 H23 H 0 0 N N N N N N 91.713 -30.259 16.224 5.900 -2.823 0.311 H292 A1IOZ 56 A1IOZ H291 H24 H 0 0 N N N N N N 93.116 -29.606 17.136 5.348 -2.496 -1.349 H291 A1IOZ 57 A1IOZ H301 H25 H 0 0 N N N N N N 93.363 -31.912 16.639 7.138 -1.025 -0.700 H301 A1IOZ 58 A1IOZ H302 H26 H 0 0 N N N N N N 93.257 -31.693 18.254 5.744 -0.141 -0.900 H302 A1IOZ 59 A1IOZ H151 H28 H 0 0 N N N N N N 83.053 -31.470 21.625 -3.741 -3.498 -0.932 H151 A1IOZ 60 A1IOZ H181 H29 H 0 0 N N N N N N 87.440 -33.690 24.396 -0.074 -2.461 2.491 H181 A1IOZ 61 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IOZ C02 O01 DOUB N N 1 A1IOZ N03 C02 SING N N 2 A1IOZ O05 C04 DOUB N N 3 A1IOZ C06 C04 SING N N 4 A1IOZ N07 C06 SING Y N 5 A1IOZ N09 C08 DOUB Y N 6 A1IOZ C10 N09 SING Y N 7 A1IOZ N11 C10 SING N N 8 A1IOZ C12 N11 SING N N 9 A1IOZ C08 N07 SING Y N 10 A1IOZ C13 N07 SING N N 11 A1IOZ C14 C13 SING N N 12 A1IOZ O15 C14 SING N N 13 A1IOZ C17 C16 SING N N 14 A1IOZ O18 C17 SING N N 15 A1IOZ C19 C17 SING N N 16 A1IOZ N20 C19 SING N N 17 A1IOZ O22 C21 DOUB N N 18 A1IOZ C23 C21 SING N N 19 A1IOZ C24 C23 DOUB Y N 20 A1IOZ C25 C24 SING Y N 21 A1IOZ C27 C26 SING Y N 22 A1IOZ C28 C27 DOUB Y N 23 A1IOZ C26 C25 DOUB Y N 24 A1IOZ C29 C25 SING N N 25 A1IOZ N30 C29 SING N N 26 A1IOZ C21 N20 SING N N 27 A1IOZ C31 N20 SING N N 28 A1IOZ C16 C14 SING N N 29 A1IOZ C32 C14 SING N N 30 A1IOZ C04 N03 SING N N 31 A1IOZ C33 N03 SING N N 32 A1IOZ C02 N11 SING N N 33 A1IOZ C06 C10 DOUB Y N 34 A1IOZ C13 C31 SING N N 35 A1IOZ C23 C28 SING Y N 36 A1IOZ C12 H122 SING N N 37 A1IOZ C12 H123 SING N N 38 A1IOZ C12 H121 SING N N 39 A1IOZ C13 H131 SING N N 40 A1IOZ C16 H162 SING N N 41 A1IOZ C16 H161 SING N N 42 A1IOZ C17 H171 SING N N 43 A1IOZ C19 H192 SING N N 44 A1IOZ C19 H191 SING N N 45 A1IOZ C24 H241 SING N N 46 A1IOZ C26 H261 SING N N 47 A1IOZ C27 H271 SING N N 48 A1IOZ C31 H312 SING N N 49 A1IOZ C31 H311 SING N N 50 A1IOZ C32 H322 SING N N 51 A1IOZ C32 H321 SING N N 52 A1IOZ C32 H323 SING N N 53 A1IOZ C33 H333 SING N N 54 A1IOZ C33 H331 SING N N 55 A1IOZ C33 H332 SING N N 56 A1IOZ C08 H081 SING N N 57 A1IOZ C28 H281 SING N N 58 A1IOZ C29 H292 SING N N 59 A1IOZ C29 H291 SING N N 60 A1IOZ N30 H301 SING N N 61 A1IOZ N30 H302 SING N N 62 A1IOZ O15 H151 SING N N 63 A1IOZ O18 H181 SING N N 64 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1IOZ InChI InChI 1.06 "InChI=1S/C22H28N6O5/c1-22(33)8-15(29)10-27(19(30)14-6-4-5-13(7-14)9-23)11-16(22)28-12-24-18-17(28)20(31)26(3)21(32)25(18)2/h4-7,12,15-16,29,33H,8-11,23H2,1-3H3/t15-,16+,22+/m1/s1" A1IOZ InChIKey InChI 1.06 FXPPOWIXSPMXLU-VVBPWWLESA-N A1IOZ SMILES_CANONICAL CACTVS 3.385 "CN1C(=O)N(C)c2ncn([C@H]3CN(C[C@H](O)C[C@]3(C)O)C(=O)c4cccc(CN)c4)c2C1=O" A1IOZ SMILES CACTVS 3.385 "CN1C(=O)N(C)c2ncn([CH]3CN(C[CH](O)C[C]3(C)O)C(=O)c4cccc(CN)c4)c2C1=O" A1IOZ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@]1(C[C@H](CN(C[C@@H]1n2cnc3c2C(=O)N(C(=O)N3C)C)C(=O)c4cccc(c4)CN)O)O" A1IOZ SMILES "OpenEye OEToolkits" 2.0.7 "CC1(CC(CN(CC1n2cnc3c2C(=O)N(C(=O)N3C)C)C(=O)c4cccc(c4)CN)O)O" # _pdbx_chem_comp_identifier.comp_id A1IOZ _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "7-[(3~{S},4~{S},6~{R})-1-[3-(aminomethyl)phenyl]carbonyl-4-methyl-4,6-bis(oxidanyl)azepan-3-yl]-1,3-dimethyl-purine-2,6-dione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1IOZ "Create component" 2024-09-19 PDBE A1IOZ "Initial release" 2024-10-02 RCSB #