data_A1IPL # _chem_comp.id A1IPL _chem_comp.name para-boronophenylalanine _chem_comp.type "L-peptide linking" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C9 H13 B N O5" _chem_comp.mon_nstd_parent_comp_id PHE _chem_comp.pdbx_synonyms "[4-[(2~{S})-2-azanyl-3-oxidanyl-3-oxidanylidene-propyl]phenyl]-$l^{3}-oxidanyl-bis(oxidanyl)boron" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-09-24 _chem_comp.pdbx_modified_date 2024-12-20 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 226.014 _chem_comp.one_letter_code F _chem_comp.three_letter_code A1IPL _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9GTV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1IPL N N1 N 0 1 N N N Y Y N -11.376 16.481 -76.130 -2.510 1.474 -0.761 N A1IPL 1 A1IPL CA C1 C 0 1 N N S N Y N -12.701 16.101 -75.567 -2.769 0.070 -0.416 CA A1IPL 2 A1IPL C C2 C 0 1 N N N N Y Y -13.498 15.467 -76.701 -4.245 -0.125 -0.183 C A1IPL 3 A1IPL O O1 O 0 1 N N N N Y Y -14.031 14.352 -76.489 -4.948 0.825 0.067 O A1IPL 4 A1IPL CB C3 C 0 1 N N N N N N -13.448 17.277 -74.925 -1.999 -0.293 0.856 CB A1IPL 5 A1IPL OB1 O2 O 0 1 N N N N N N -18.978 17.004 -71.220 4.295 -1.217 0.038 OB1 A1IPL 6 A1IPL OB2 O3 O 0 1 N N N N N N -19.784 16.009 -73.260 3.934 0.371 -1.488 OB2 A1IPL 7 A1IPL CG C4 C 0 1 Y N N N N N -14.782 16.952 -74.253 -0.519 -0.216 0.586 CG A1IPL 8 A1IPL CD1 C5 C 0 1 Y N N N N N -14.827 16.455 -72.948 0.160 0.970 0.791 CD1 A1IPL 9 A1IPL CD2 C6 C 0 1 Y N N N N N -15.993 17.115 -74.922 0.162 -1.333 0.138 CD2 A1IPL 10 A1IPL CE1 C7 C 0 1 Y N N N N N -16.035 16.154 -72.324 1.518 1.041 0.544 CE1 A1IPL 11 A1IPL CE2 C8 C 0 1 Y N N N N N -17.204 16.824 -74.299 1.520 -1.262 -0.109 CE2 A1IPL 12 A1IPL CZ C9 C 0 1 Y N N N N N -17.263 16.317 -72.986 2.198 -0.074 0.091 CZ A1IPL 13 A1IPL BZ B1 B 0 1 N N N N N N -18.682 15.992 -72.265 3.726 0.005 -0.188 BZ A1IPL 14 A1IPL O3 O4 O 0 1 N N N N N N -18.665 14.654 -71.617 4.293 0.932 0.642 O3 A1IPL 15 A1IPL OXT O5 O 0 1 N Y N N Y Y -13.521 16.091 -77.874 -4.778 -1.355 -0.252 OXT A1IPL 16 A1IPL H H1 H 0 1 N N N Y Y N -10.818 16.903 -75.415 -2.955 1.721 -1.632 H A1IPL 17 A1IPL H2 H2 H 0 1 N N N Y Y N -10.914 15.664 -76.475 -2.804 2.090 -0.017 H2 A1IPL 18 A1IPL HA H4 H 0 1 N N N N Y N -12.544 15.336 -74.792 -2.442 -0.571 -1.234 HA A1IPL 19 A1IPL HB2 H5 H 0 1 N N N N N N -12.788 17.716 -74.163 -2.261 0.405 1.651 HB2 A1IPL 20 A1IPL HB3 H6 H 0 1 N N N N N N -13.643 18.019 -75.713 -2.261 -1.306 1.161 HB3 A1IPL 21 A1IPL H7 H7 H 0 1 N N N N N N -18.281 17.006 -70.574 4.187 -1.540 0.943 H7 A1IPL 22 A1IPL H8 H8 H 0 1 N N N N N N -20.607 15.818 -72.825 3.557 1.230 -1.720 H8 A1IPL 23 A1IPL HD1 H9 H 0 1 N N N N N N -13.903 16.301 -72.410 -0.370 1.842 1.145 HD1 A1IPL 24 A1IPL HD2 H10 H 0 1 N N N N N N -15.993 17.473 -75.941 -0.368 -2.261 -0.018 HD2 A1IPL 25 A1IPL HE1 H11 H 0 1 N N N N N N -16.027 15.787 -71.308 2.049 1.968 0.704 HE1 A1IPL 26 A1IPL HE2 H12 H 0 1 N N N N N N -18.125 16.992 -74.838 2.051 -2.135 -0.458 HE2 A1IPL 27 A1IPL H13 H13 H 0 1 N N N N N N -17.965 14.621 -70.975 5.247 1.035 0.524 H13 A1IPL 28 A1IPL HXT H14 H 0 1 N N N N Y Y -13.996 15.563 -78.505 -5.729 -1.431 -0.095 HXT A1IPL 29 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IPL C O DOUB N N 1 A1IPL C CA SING N N 2 A1IPL N CA SING N N 3 A1IPL CA CB SING N N 4 A1IPL CB CG SING N N 5 A1IPL CD2 CE2 DOUB Y N 6 A1IPL CD2 CG SING Y N 7 A1IPL CE2 CZ SING Y N 8 A1IPL CG CD1 DOUB Y N 9 A1IPL OB2 BZ SING N N 10 A1IPL CZ CE1 DOUB Y N 11 A1IPL CZ BZ SING N N 12 A1IPL CD1 CE1 SING Y N 13 A1IPL BZ O3 SING N N 14 A1IPL BZ OB1 SING N N 15 A1IPL C OXT SING N N 16 A1IPL N H SING N N 17 A1IPL N H2 SING N N 18 A1IPL CA HA SING N N 19 A1IPL CB HB2 SING N N 20 A1IPL CB HB3 SING N N 21 A1IPL OB1 H7 SING N N 22 A1IPL OB2 H8 SING N N 23 A1IPL CD1 HD1 SING N N 24 A1IPL CD2 HD2 SING N N 25 A1IPL CE1 HE1 SING N N 26 A1IPL CE2 HE2 SING N N 27 A1IPL O3 H13 SING N N 28 A1IPL OXT HXT SING N N 29 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1IPL InChI InChI 1.06 "InChI=1S/C9H13BNO5/c11-8(9(12)13)5-6-1-3-7(4-2-6)10(14,15)16/h1-4,8,14-16H,5,11H2,(H,12,13)/t8-/m0/s1" A1IPL InChIKey InChI 1.06 RKKVYNKEKVALLU-QMMMGPOBSA-N A1IPL SMILES_CANONICAL CACTVS 3.385 "N[C@@H](Cc1ccc(cc1)[B](O)(O)O)C(O)=O" A1IPL SMILES CACTVS 3.385 "N[CH](Cc1ccc(cc1)[B](O)(O)O)C(O)=O" A1IPL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "B(c1ccc(cc1)C[C@@H](C(=O)O)N)(O)(O)O" A1IPL SMILES "OpenEye OEToolkits" 2.0.7 "B(c1ccc(cc1)CC(C(=O)O)N)(O)(O)O" # _pdbx_chem_comp_identifier.comp_id A1IPL _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[4-[(2~{S})-2-azanyl-3-oxidanyl-3-oxidanylidene-propyl]phenyl]-tris(oxidanyl)boron" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id A1IPL _pdbx_chem_comp_synonyms.name "[4-[(2~{S})-2-azanyl-3-oxidanyl-3-oxidanylidene-propyl]phenyl]-$l^{3}-oxidanyl-bis(oxidanyl)boron" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1IPL "Create component" 2024-09-24 PDBE A1IPL "Modify PCM" 2024-12-16 PDBE A1IPL "Initial release" 2024-12-25 RCSB # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id A1IPL _pdbx_chem_comp_pcm.modified_residue_id PHE _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Non-standard residue" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom ? _pdbx_chem_comp_pcm.modified_residue_id_linking_atom ? _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #