data_A1IQP # _chem_comp.id A1IQP _chem_comp.name "(1~{R},3~{S},5~{Z})-5-[(2~{E})-2-[(1~{R},3~{a}~{S},7~{a}~{R})-1-[(2~{R})-5-[~{tert}-butyl(dimethyl)silyl]pent-4-yn-2-yl]-7~{a}-methyl-2,3,3~{a},5,6,7-hexahydro-1~{H}-inden-4-ylidene]ethylidene]-4-methylidene-cyclohexane-1,3-diol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C30 H48 O2 Si" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-10-02 _chem_comp.pdbx_modified_date 2024-12-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 468.786 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1IQP _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9GYC _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1IQP C7 C1 C 0 1 N N N N N N -29.604 18.441 -3.839 1.180 -1.293 -1.991 C7 A1IQP 1 A1IQP C8 C2 C 0 1 N N N N N N -28.101 18.211 -4.191 -0.343 -1.573 -2.127 C8 A1IQP 2 A1IQP C9 C3 C 0 1 N N R N N N -28.086 16.976 -5.138 -0.781 -2.254 -0.804 C9 A1IQP 3 A1IQP C1 C4 C 0 1 N N N N N N -31.492 15.708 -6.669 1.908 -3.070 1.884 C1 A1IQP 4 A1IQP C5 C5 C 0 1 N N R N N N -29.488 16.978 -5.784 0.461 -2.249 0.073 C5 A1IQP 5 A1IQP C6 C6 C 0 1 N N N N N N -30.002 15.652 -6.357 0.646 -3.377 1.061 C6 A1IQP 6 A1IQP C4 C7 C 0 1 N N S N N N -30.341 17.265 -4.518 1.627 -2.327 -0.956 C4 A1IQP 7 A1IQP C3 C8 C 0 1 N N N N N N -31.812 17.362 -4.835 2.871 -2.016 -0.177 C3 A1IQP 8 A1IQP C2 C9 C 0 1 N N N N N N -32.319 16.072 -5.425 3.146 -2.938 1.002 C2 A1IQP 9 A1IQP C10 C10 C 0 1 N N N N N N -32.520 18.485 -4.705 3.678 -1.004 -0.495 C10 A1IQP 10 A1IQP C11 C11 C 0 1 N N N N N N -33.895 18.658 -5.044 4.879 -0.747 0.302 C11 A1IQP 11 A1IQP C12 C12 C 0 1 N N N N N N -34.489 19.803 -5.435 5.696 0.277 -0.021 C12 A1IQP 12 A1IQP C13 C13 C 0 1 N N N N N N -35.967 19.841 -5.715 6.949 0.576 0.779 C13 A1IQP 13 A1IQP C14 C14 C 0 1 N N R N N N -36.637 21.085 -5.152 6.995 2.081 1.059 C14 A1IQP 14 A1IQP C15 C15 C 0 1 N N N N N N -35.945 22.333 -5.670 6.966 2.855 -0.259 C15 A1IQP 15 A1IQP C16 C16 C 0 1 N N S N N N -34.470 22.329 -5.295 5.616 2.648 -0.953 C16 A1IQP 16 A1IQP C17 C17 C 0 1 N N N N N N -33.780 21.072 -5.777 5.416 1.158 -1.173 C17 A1IQP 17 A1IQP C18 C18 C 0 1 N N N N N N -32.674 21.134 -6.510 5.007 0.669 -2.344 C18 A1IQP 18 A1IQP C21 C19 C 0 1 N N N N N N -29.682 18.121 -6.805 0.545 -0.917 0.822 C21 A1IQP 19 A1IQP C22 C20 C 0 1 N N R N N N -26.830 16.911 -6.027 -1.906 -1.455 -0.142 C22 A1IQP 20 A1IQP C23 C21 C 0 1 N N N N N N -25.627 16.317 -5.311 -2.297 -2.123 1.178 C23 A1IQP 21 A1IQP C24 C22 C 0 1 N N N N N N -26.375 18.297 -6.475 -3.119 -1.414 -1.073 C24 A1IQP 22 A1IQP C25 C23 C 0 1 N N N N N N -25.126 18.233 -7.234 -4.155 -0.547 -0.490 C25 A1IQP 23 A1IQP C26 C24 C 0 1 N N N N N N -24.209 18.224 -8.008 -4.982 0.145 -0.025 C26 A1IQP 24 A1IQP C28 C25 C 0 1 N N N N N N -24.026 17.996 -10.970 -7.798 1.315 -0.406 C28 A1IQP 25 A1IQP C29 C26 C 0 1 N N N N N N -21.704 17.001 -9.197 -6.833 0.591 2.387 C29 A1IQP 26 A1IQP C30 C27 C 0 1 N N N N N N -22.227 19.984 -9.448 -5.642 2.987 0.939 C30 A1IQP 27 A1IQP C31 C28 C 0 1 N N N N N N -23.175 18.320 -12.209 -7.377 1.868 -1.769 C31 A1IQP 28 A1IQP C32 C29 C 0 1 N N N N N N -25.258 18.896 -10.988 -8.875 2.217 0.200 C32 A1IQP 29 A1IQP C33 C30 C 0 1 N N N N N N -24.482 16.543 -10.981 -8.355 -0.099 -0.580 C33 A1IQP 30 A1IQP O19 O1 O 0 1 N N N N N N -33.867 23.546 -5.775 4.567 3.163 -0.129 O19 A1IQP 31 A1IQP O20 O2 O 0 1 N N N N N N -36.617 21.039 -3.711 8.195 2.396 1.768 O20 A1IQP 32 A1IQP SI27 SI1 SI 0 0 N N N N N N -23.019 18.299 -9.415 -6.320 1.265 0.728 SI27 A1IQP 33 A1IQP H1 H1 H 0 1 N N N N N N -29.955 19.404 -4.239 1.689 -1.452 -2.941 H1 A1IQP 34 A1IQP H2 H2 H 0 1 N N N N N N -29.757 18.419 -2.750 1.355 -0.281 -1.626 H2 A1IQP 35 A1IQP H3 H3 H 0 1 N N N N N N -27.519 18.006 -3.280 -0.886 -0.638 -2.264 H3 A1IQP 36 A1IQP H4 H4 H 0 1 N N N N N N -27.685 19.093 -4.701 -0.527 -2.239 -2.970 H4 A1IQP 37 A1IQP H5 H5 H 0 1 N N N N N N -28.049 16.091 -4.486 -1.106 -3.277 -0.994 H5 A1IQP 38 A1IQP H6 H6 H 0 1 N N N N N N -31.665 16.466 -7.447 1.760 -2.135 2.426 H6 A1IQP 39 A1IQP H7 H7 H 0 1 N N N N N N -31.816 14.724 -7.038 2.068 -3.874 2.602 H7 A1IQP 40 A1IQP H8 H8 H 0 1 N N N N N N -29.822 14.853 -5.622 0.773 -4.319 0.527 H8 A1IQP 41 A1IQP H9 H9 H 0 1 N N N N N N -29.453 15.428 -7.283 -0.220 -3.437 1.720 H9 A1IQP 42 A1IQP H10 H10 H 0 1 N N N N N N -30.215 16.395 -3.856 1.683 -3.319 -1.405 H10 A1IQP 43 A1IQP H11 H11 H 0 1 N N N N N N -33.375 16.191 -5.710 3.966 -2.531 1.593 H11 A1IQP 44 A1IQP H12 H12 H 0 1 N N N N N N -32.229 15.269 -4.679 3.427 -3.924 0.629 H12 A1IQP 45 A1IQP H13 H13 H 0 1 N N N N N N -32.003 19.345 -4.305 3.445 -0.373 -1.341 H13 A1IQP 46 A1IQP H14 H14 H 0 1 N N N N N N -34.524 17.782 -4.981 5.112 -1.378 1.147 H14 A1IQP 47 A1IQP H15 H15 H 0 1 N N N N N N -36.120 19.821 -6.804 6.923 0.027 1.720 H15 A1IQP 48 A1IQP H16 H16 H 0 1 N N N N N N -36.434 18.954 -5.263 7.829 0.282 0.206 H16 A1IQP 49 A1IQP H17 H17 H 0 1 N N N N N N -37.680 21.100 -5.500 6.133 2.364 1.663 H17 A1IQP 50 A1IQP H18 H18 H 0 1 N N N N N N -36.426 23.220 -5.232 7.110 3.916 -0.057 H18 A1IQP 51 A1IQP H19 H19 H 0 1 N N N N N N -36.038 22.369 -6.765 7.765 2.499 -0.909 H19 A1IQP 52 A1IQP H20 H20 H 0 1 N N N N N N -34.415 22.330 -4.196 5.614 3.163 -1.914 H20 A1IQP 53 A1IQP H21 H21 H 0 1 N N N N N N -32.253 22.093 -6.771 4.873 -0.396 -2.467 H21 A1IQP 54 A1IQP H22 H22 H 0 1 N N N N N N -32.196 20.225 -6.845 4.810 1.337 -3.169 H22 A1IQP 55 A1IQP H23 H23 H 0 1 N N N N N N -29.308 19.063 -6.377 -0.263 -0.859 1.552 H23 A1IQP 56 A1IQP H24 H24 H 0 1 N N N N N N -29.125 17.889 -7.725 1.504 -0.849 1.335 H24 A1IQP 57 A1IQP H25 H25 H 0 1 N N N N N N -30.751 18.224 -7.041 0.453 -0.095 0.112 H25 A1IQP 58 A1IQP H26 H26 H 0 1 N N N N N N -27.055 16.303 -6.916 -1.563 -0.439 0.053 H26 A1IQP 59 A1IQP H27 H27 H 0 1 N N N N N N -25.875 15.307 -4.953 -2.640 -3.139 0.983 H27 A1IQP 60 A1IQP H28 H28 H 0 1 N N N N N N -24.777 16.261 -6.007 -1.433 -2.152 1.841 H28 A1IQP 61 A1IQP H29 H29 H 0 1 N N N N N N -25.359 16.954 -4.455 -3.098 -1.553 1.650 H29 A1IQP 62 A1IQP H30 H30 H 0 1 N N N N N N -26.221 18.927 -5.587 -2.819 -1.020 -2.044 H30 A1IQP 63 A1IQP H31 H31 H 0 1 N N N N N N -27.156 18.742 -7.109 -3.516 -2.422 -1.197 H31 A1IQP 64 A1IQP H32 H32 H 0 1 N N N N N N -21.133 17.207 -8.279 -7.230 -0.416 2.263 H32 A1IQP 65 A1IQP H33 H33 H 0 1 N N N N N N -22.176 16.010 -9.121 -5.968 0.562 3.050 H33 A1IQP 66 A1IQP H34 H34 H 0 1 N N N N N N -21.025 17.018 -10.062 -7.600 1.234 2.819 H34 A1IQP 67 A1IQP H35 H35 H 0 1 N N N N N N -21.645 20.134 -8.527 -6.409 3.630 1.371 H35 A1IQP 68 A1IQP H36 H36 H 0 1 N N N N N N -21.560 20.059 -10.320 -4.777 2.958 1.602 H36 A1IQP 69 A1IQP H37 H37 H 0 1 N N N N N N -23.008 20.755 -9.517 -5.342 3.382 -0.032 H37 A1IQP 70 A1IQP H38 H38 H 0 1 N N N N N N -22.279 17.681 -12.217 -6.609 1.226 -2.200 H38 A1IQP 71 A1IQP H39 H39 H 0 1 N N N N N N -23.766 18.134 -13.118 -8.241 1.898 -2.432 H39 A1IQP 72 A1IQP H40 H40 H 0 1 N N N N N N -22.871 19.377 -12.179 -6.980 2.876 -1.645 H40 A1IQP 73 A1IQP H41 H41 H 0 1 N N N N N N -25.883 18.681 -10.109 -8.478 3.224 0.324 H41 A1IQP 74 A1IQP H42 H42 H 0 1 N N N N N N -24.943 19.950 -10.965 -9.740 2.246 -0.463 H42 A1IQP 75 A1IQP H43 H43 H 0 1 N N N N N N -25.837 18.707 -11.904 -9.175 1.822 1.171 H43 A1IQP 76 A1IQP H44 H44 H 0 1 N N N N N N -25.087 16.341 -10.085 -8.655 -0.494 0.391 H44 A1IQP 77 A1IQP H45 H45 H 0 1 N N N N N N -25.086 16.355 -11.881 -9.220 -0.070 -1.243 H45 A1IQP 78 A1IQP H46 H46 H 0 1 N N N N N N -23.602 15.883 -10.985 -7.588 -0.742 -1.011 H46 A1IQP 79 A1IQP H47 H47 H 0 1 N N N N N N -34.347 24.293 -5.436 3.684 3.064 -0.510 H47 A1IQP 80 A1IQP H48 H48 H 0 1 N N N N N N -37.036 21.817 -3.363 8.279 1.944 2.619 H48 A1IQP 81 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IQP C31 C28 SING N N 1 A1IQP C32 C28 SING N N 2 A1IQP C33 C28 SING N N 3 A1IQP C28 SI27 SING N N 4 A1IQP C30 SI27 SING N N 5 A1IQP SI27 C29 SING N N 6 A1IQP SI27 C26 SING N N 7 A1IQP C26 C25 TRIP N N 8 A1IQP C25 C24 SING N N 9 A1IQP C21 C5 SING N N 10 A1IQP C1 C6 SING N N 11 A1IQP C1 C2 SING N N 12 A1IQP C18 C17 DOUB N N 13 A1IQP C24 C22 SING N N 14 A1IQP C6 C5 SING N N 15 A1IQP C22 C23 SING N N 16 A1IQP C22 C9 SING N N 17 A1IQP C5 C9 SING N N 18 A1IQP C5 C4 SING N N 19 A1IQP C17 C12 SING N N 20 A1IQP C17 C16 SING N N 21 A1IQP O19 C16 SING N N 22 A1IQP C13 C12 SING N N 23 A1IQP C13 C14 SING N N 24 A1IQP C15 C16 SING N N 25 A1IQP C15 C14 SING N N 26 A1IQP C12 C11 DOUB N Z 27 A1IQP C2 C3 SING N N 28 A1IQP C14 O20 SING N N 29 A1IQP C9 C8 SING N N 30 A1IQP C11 C10 SING N N 31 A1IQP C3 C10 DOUB N E 32 A1IQP C3 C4 SING N N 33 A1IQP C4 C7 SING N N 34 A1IQP C8 C7 SING N N 35 A1IQP C7 H1 SING N N 36 A1IQP C7 H2 SING N N 37 A1IQP C8 H3 SING N N 38 A1IQP C8 H4 SING N N 39 A1IQP C9 H5 SING N N 40 A1IQP C1 H6 SING N N 41 A1IQP C1 H7 SING N N 42 A1IQP C6 H8 SING N N 43 A1IQP C6 H9 SING N N 44 A1IQP C4 H10 SING N N 45 A1IQP C2 H11 SING N N 46 A1IQP C2 H12 SING N N 47 A1IQP C10 H13 SING N N 48 A1IQP C11 H14 SING N N 49 A1IQP C13 H15 SING N N 50 A1IQP C13 H16 SING N N 51 A1IQP C14 H17 SING N N 52 A1IQP C15 H18 SING N N 53 A1IQP C15 H19 SING N N 54 A1IQP C16 H20 SING N N 55 A1IQP C18 H21 SING N N 56 A1IQP C18 H22 SING N N 57 A1IQP C21 H23 SING N N 58 A1IQP C21 H24 SING N N 59 A1IQP C21 H25 SING N N 60 A1IQP C22 H26 SING N N 61 A1IQP C23 H27 SING N N 62 A1IQP C23 H28 SING N N 63 A1IQP C23 H29 SING N N 64 A1IQP C24 H30 SING N N 65 A1IQP C24 H31 SING N N 66 A1IQP C29 H32 SING N N 67 A1IQP C29 H33 SING N N 68 A1IQP C29 H34 SING N N 69 A1IQP C30 H35 SING N N 70 A1IQP C30 H36 SING N N 71 A1IQP C30 H37 SING N N 72 A1IQP C31 H38 SING N N 73 A1IQP C31 H39 SING N N 74 A1IQP C31 H40 SING N N 75 A1IQP C32 H41 SING N N 76 A1IQP C32 H42 SING N N 77 A1IQP C32 H43 SING N N 78 A1IQP C33 H44 SING N N 79 A1IQP C33 H45 SING N N 80 A1IQP C33 H46 SING N N 81 A1IQP O19 H47 SING N N 82 A1IQP O20 H48 SING N N 83 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1IQP InChI InChI 1.06 "InChI=1S/C30H48O2Si/c1-21(11-10-18-33(7,8)29(3,4)5)26-15-16-27-23(12-9-17-30(26,27)6)13-14-24-19-25(31)20-28(32)22(24)2/h13-14,21,25-28,31-32H,2,9,11-12,15-17,19-20H2,1,3-8H3/b23-13+,24-14-/t21-,25-,26-,27+,28+,30-/m1/s1" A1IQP InChIKey InChI 1.06 PXYICUQZBKYXSJ-JJADZVGUSA-N A1IQP SMILES_CANONICAL CACTVS 3.385 "C[C@H](CC#C[Si](C)(C)C(C)(C)C)[C@H]1CC[C@H]2\C(CCC[C@]12C)=C\C=C3\C[C@@H](O)C[C@H](O)C3=C" A1IQP SMILES CACTVS 3.385 "C[CH](CC#C[Si](C)(C)C(C)(C)C)[CH]1CC[CH]2C(CCC[C]12C)=CC=C3C[CH](O)C[CH](O)C3=C" A1IQP SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H](CC#C[Si](C)(C)C(C)(C)C)[C@H]1CC[C@@H]\2[C@@]1(CCC/C2=C\C=C/3\C[C@H](C[C@@H](C3=C)O)O)C" A1IQP SMILES "OpenEye OEToolkits" 2.0.7 "CC(CC#C[Si](C)(C)C(C)(C)C)C1CCC2C1(CCCC2=CC=C3CC(CC(C3=C)O)O)C" # _pdbx_chem_comp_identifier.comp_id A1IQP _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(1~{R},3~{S},5~{Z})-5-[(2~{E})-2-[(1~{R},3~{a}~{S},7~{a}~{R})-1-[(2~{R})-5-[~{tert}-butyl(dimethyl)silyl]pent-4-yn-2-yl]-7~{a}-methyl-2,3,3~{a},5,6,7-hexahydro-1~{H}-inden-4-ylidene]ethylidene]-4-methylidene-cyclohexane-1,3-diol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1IQP "Create component" 2024-10-02 PDBE A1IQP "Initial release" 2024-12-11 RCSB #