data_A1IQQ # _chem_comp.id A1IQQ _chem_comp.name "(1~{R},3~{S},5~{Z})-5-[(2~{E})-2-[(1~{R},3~{a}~{S},7~{a}~{R})-1-[(2~{R})-5-dimethylsilylpent-4-yn-2-yl]-7~{a}-methyl-2,3,3~{a},5,6,7-hexahydro-1~{H}-inden-4-ylidene]ethylidene]-4-methylidene-cyclohexane-1,3-diol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H40 O2 Si" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-10-02 _chem_comp.pdbx_modified_date 2024-12-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 412.680 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1IQQ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9GYA _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1IQQ C7 C1 C 0 1 N N N N N N -29.647 18.382 -3.733 0.011 -1.178 -1.961 C7 A1IQQ 1 A1IQQ C8 C2 C 0 1 N N N N N N -28.150 18.202 -4.110 -1.530 -1.336 -2.092 C8 A1IQQ 2 A1IQQ C9 C3 C 0 1 N N R N N N -28.108 17.006 -5.091 -2.020 -1.956 -0.757 C9 A1IQQ 3 A1IQQ C1 C4 C 0 1 N N N N N N -31.504 15.645 -6.604 0.598 -2.940 1.945 C1 A1IQQ 4 A1IQQ C5 C5 C 0 1 N N R N N N -29.519 16.981 -5.722 -0.780 -2.036 0.119 C5 A1IQQ 5 A1IQQ C6 C6 C 0 1 N N N N N N -30.004 15.647 -6.310 -0.686 -3.158 1.127 C6 A1IQQ 6 A1IQQ C4 C7 C 0 1 N N S N N N -30.370 17.223 -4.449 0.374 -2.227 -0.908 C4 A1IQQ 7 A1IQQ C3 C8 C 0 1 N N N N N N -31.845 17.294 -4.770 1.640 -2.005 -0.135 C3 A1IQQ 8 A1IQQ C2 C9 C 0 1 N N N N N N -32.326 15.994 -5.352 1.841 -2.925 1.060 C2 A1IQQ 9 A1IQQ C10 C10 C 0 1 N N N N N N -32.570 18.416 -4.665 2.526 -1.068 -0.471 C10 A1IQQ 10 A1IQQ C11 C11 C 0 1 N N N N N N -33.931 18.579 -5.059 3.746 -0.896 0.321 C11 A1IQQ 11 A1IQQ C12 C12 C 0 1 N N N N N N -34.519 19.698 -5.544 4.643 0.053 -0.019 C12 A1IQQ 12 A1IQQ C13 C13 C 0 1 N N N N N N -35.995 19.746 -5.865 5.918 0.263 0.774 C13 A1IQQ 13 A1IQQ C14 C14 C 0 1 N N R N N N -36.690 20.985 -5.324 6.086 1.764 1.028 C14 A1IQQ 14 A1IQQ C15 C15 C 0 1 N N N N N N -35.941 22.227 -5.771 6.119 2.514 -0.304 C15 A1IQQ 15 A1IQQ C16 C16 C 0 1 N N S N N N -34.486 22.156 -5.327 4.755 2.406 -0.994 C16 A1IQQ 16 A1IQQ C17 C17 C 0 1 N N N N N N -33.819 20.923 -5.887 4.434 0.933 -1.188 C17 A1IQQ 17 A1IQQ C18 C18 C 0 1 N N N N N N -32.765 21.007 -6.684 3.985 0.458 -2.349 C18 A1IQQ 18 A1IQQ C21 C19 C 0 1 N N N N N N -29.763 18.126 -6.722 -0.587 -0.703 0.844 C21 A1IQQ 19 A1IQQ C22 C20 C 0 1 N N R N N N -26.857 17.004 -5.997 -3.074 -1.056 -0.109 C22 A1IQQ 20 A1IQQ C23 C21 C 0 1 N N N N N N -25.640 16.377 -5.326 -3.517 -1.666 1.222 C23 A1IQQ 21 A1IQQ C24 C22 C 0 1 N N N N N N -26.493 18.398 -6.555 -4.282 -0.933 -1.041 C24 A1IQQ 22 A1IQQ C25 C23 C 0 1 N N N N N N -25.838 18.337 -7.868 -5.243 0.027 -0.474 C25 A1IQQ 23 A1IQQ C26 C24 C 0 1 N N N N N N -25.242 18.221 -8.903 -6.010 0.792 -0.021 C26 A1IQQ 24 A1IQQ O19 O1 O 0 1 N N N N N N -33.812 23.351 -5.687 3.753 3.019 -0.180 O19 A1IQQ 25 A1IQQ O20 O2 O 0 1 N N N N N N -36.759 20.931 -3.878 7.309 1.992 1.731 O20 A1IQQ 26 A1IQQ C28 C25 C 0 1 N N N N N N -22.681 17.782 -10.234 -6.434 3.695 0.892 C28 A1IQQ 27 A1IQQ C29 C26 C 0 1 N N N N N N -25.317 16.769 -11.389 -8.722 2.180 -0.423 C29 A1IQQ 28 A1IQQ SI27 SI1 SI 0 0 N N N N N N -24.479 18.173 -10.509 -7.251 2.030 0.711 SI27 A1IQQ 29 A1IQQ H1 H1 H 0 1 N N N N N N -30.023 19.353 -4.088 0.504 -1.396 -2.908 H1 A1IQQ 30 A1IQQ H2 H2 H 0 1 N N N N N N -29.784 18.312 -2.644 0.269 -0.177 -1.614 H2 A1IQQ 31 A1IQQ H3 H3 H 0 1 N N N N N N -27.552 17.984 -3.213 -1.995 -0.362 -2.246 H3 A1IQQ 32 A1IQQ H4 H4 H 0 1 N N N N N N -27.765 19.111 -4.596 -1.769 -2.000 -2.924 H4 A1IQQ 33 A1IQQ H5 H5 H 0 1 N N N N N N -28.036 16.102 -4.468 -2.428 -2.952 -0.929 H5 A1IQQ 34 A1IQQ H6 H6 H 0 1 N N N N N N -31.715 16.387 -7.388 0.528 -1.987 2.470 H6 A1IQQ 35 A1IQQ H7 H7 H 0 1 N N N N N N -31.797 14.645 -6.957 0.693 -3.741 2.677 H7 A1IQQ 36 A1IQQ H8 H8 H 0 1 N N N N N N -29.785 14.844 -5.590 -0.637 -4.116 0.611 H8 A1IQQ 37 A1IQQ H9 H9 H 0 1 N N N N N N -29.461 15.457 -7.248 -1.553 -3.135 1.787 H9 A1IQQ 38 A1IQQ H10 H10 H 0 1 N N N N N N -30.230 16.335 -3.815 0.349 -3.228 -1.339 H10 A1IQQ 39 A1IQQ H11 H11 H 0 1 N N N N N N -33.387 16.088 -5.627 2.693 -2.576 1.644 H11 A1IQQ 40 A1IQQ H12 H12 H 0 1 N N N N N N -32.210 15.195 -4.605 2.040 -3.937 0.706 H12 A1IQQ 41 A1IQQ H13 H13 H 0 1 N N N N N N -32.077 19.279 -4.242 2.345 -0.435 -1.328 H13 A1IQQ 42 A1IQQ H14 H14 H 0 1 N N N N N N -34.565 17.710 -4.959 3.928 -1.528 1.178 H14 A1IQQ 43 A1IQQ H15 H15 H 0 1 N N N N N N -36.115 19.728 -6.958 5.849 -0.265 1.726 H15 A1IQQ 44 A1IQQ H16 H16 H 0 1 N N N N N N -36.476 18.858 -5.429 6.769 -0.112 0.207 H16 A1IQQ 45 A1IQQ H17 H17 H 0 1 N N N N N N -37.708 21.023 -5.738 5.251 2.127 1.627 H17 A1IQQ 46 A1IQQ H18 H18 H 0 1 N N N N N N -36.413 23.115 -5.326 6.350 3.563 -0.121 H18 A1IQQ 47 A1IQQ H19 H19 H 0 1 N N N N N N -35.982 22.301 -6.868 6.885 2.083 -0.947 H19 A1IQQ 48 A1IQQ H20 H20 H 0 1 N N N N N N -34.482 22.066 -4.231 4.794 2.902 -1.964 H20 A1IQQ 49 A1IQQ H21 H21 H 0 1 N N N N N N -32.363 21.974 -6.948 3.764 -0.594 -2.453 H21 A1IQQ 50 A1IQQ H22 H22 H 0 1 N N N N N N -32.307 20.108 -7.071 3.842 1.125 -3.186 H22 A1IQQ 51 A1IQQ H23 H23 H 0 1 N N N N N N -29.411 19.074 -6.288 -1.386 -0.566 1.573 H23 A1IQQ 52 A1IQQ H24 H24 H 0 1 N N N N N N -29.213 17.923 -7.653 0.375 -0.704 1.356 H24 A1IQQ 53 A1IQQ H25 H25 H 0 1 N N N N N N -30.839 18.199 -6.940 -0.612 0.112 0.120 H25 A1IQQ 54 A1IQQ H26 H26 H 0 1 N N N N N N -27.100 16.374 -6.865 -2.649 -0.068 0.067 H26 A1IQQ 55 A1IQQ H27 H27 H 0 1 N N N N N N -25.908 15.386 -4.932 -2.657 -1.753 1.885 H27 A1IQQ 56 A1IQQ H28 H28 H 0 1 N N N N N N -24.829 16.272 -6.062 -4.268 -1.025 1.683 H28 A1IQQ 57 A1IQQ H29 H29 H 0 1 N N N N N N -25.304 17.021 -4.500 -3.942 -2.654 1.045 H29 A1IQQ 58 A1IQQ H30 H30 H 0 1 N N N N N N -25.812 18.893 -5.846 -3.952 -0.581 -2.019 H30 A1IQQ 59 A1IQQ H31 H31 H 0 1 N N N N N N -27.416 18.989 -6.651 -4.760 -1.906 -1.147 H31 A1IQQ 60 A1IQQ H32 H32 H 0 1 N N N N N N -34.267 24.097 -5.313 2.864 2.986 -0.558 H32 A1IQQ 61 A1IQQ H33 H33 H 0 1 N N N N N N -37.195 21.710 -3.552 7.358 1.550 2.590 H33 A1IQQ 62 A1IQQ H34 H34 H 0 1 N N N N N N -22.198 18.622 -9.712 -7.146 4.405 1.313 H34 A1IQQ 63 A1IQQ H35 H35 H 0 1 N N N N N N -22.593 16.872 -9.623 -5.574 3.607 1.556 H35 A1IQQ 64 A1IQQ H36 H36 H 0 1 N N N N N N -22.188 17.621 -11.204 -6.105 4.046 -0.085 H36 A1IQQ 65 A1IQQ H37 H37 H 0 1 N N N N N N -26.378 17.014 -11.544 -9.200 1.206 -0.529 H37 A1IQQ 66 A1IQQ H38 H38 H 0 1 N N N N N N -24.832 16.605 -12.363 -9.434 2.891 -0.002 H38 A1IQQ 67 A1IQQ H39 H39 H 0 1 N N N N N N -25.237 15.856 -10.781 -8.392 2.531 -1.401 H39 A1IQQ 68 A1IQQ H40 H40 H 0 1 N N N N N N -24.644 19.445 -11.247 -7.700 1.552 2.044 H40 A1IQQ 69 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IQQ C29 SI27 SING N N 1 A1IQQ SI27 C28 SING N N 2 A1IQQ SI27 C26 SING N N 3 A1IQQ C26 C25 TRIP N N 4 A1IQQ C25 C24 SING N N 5 A1IQQ C21 C5 SING N N 6 A1IQQ C18 C17 DOUB N N 7 A1IQQ C1 C6 SING N N 8 A1IQQ C1 C2 SING N N 9 A1IQQ C24 C22 SING N N 10 A1IQQ C6 C5 SING N N 11 A1IQQ C22 C23 SING N N 12 A1IQQ C22 C9 SING N N 13 A1IQQ C17 C12 SING N N 14 A1IQQ C17 C16 SING N N 15 A1IQQ C13 C12 SING N N 16 A1IQQ C13 C14 SING N N 17 A1IQQ C15 C16 SING N N 18 A1IQQ C15 C14 SING N N 19 A1IQQ C5 C9 SING N N 20 A1IQQ C5 C4 SING N N 21 A1IQQ O19 C16 SING N N 22 A1IQQ C12 C11 DOUB N Z 23 A1IQQ C2 C3 SING N N 24 A1IQQ C14 O20 SING N N 25 A1IQQ C9 C8 SING N N 26 A1IQQ C11 C10 SING N N 27 A1IQQ C3 C10 DOUB N E 28 A1IQQ C3 C4 SING N N 29 A1IQQ C4 C7 SING N N 30 A1IQQ C8 C7 SING N N 31 A1IQQ C7 H1 SING N N 32 A1IQQ C7 H2 SING N N 33 A1IQQ C8 H3 SING N N 34 A1IQQ C8 H4 SING N N 35 A1IQQ C9 H5 SING N N 36 A1IQQ C1 H6 SING N N 37 A1IQQ C1 H7 SING N N 38 A1IQQ C6 H8 SING N N 39 A1IQQ C6 H9 SING N N 40 A1IQQ C4 H10 SING N N 41 A1IQQ C2 H11 SING N N 42 A1IQQ C2 H12 SING N N 43 A1IQQ C10 H13 SING N N 44 A1IQQ C11 H14 SING N N 45 A1IQQ C13 H15 SING N N 46 A1IQQ C13 H16 SING N N 47 A1IQQ C14 H17 SING N N 48 A1IQQ C15 H18 SING N N 49 A1IQQ C15 H19 SING N N 50 A1IQQ C16 H20 SING N N 51 A1IQQ C18 H21 SING N N 52 A1IQQ C18 H22 SING N N 53 A1IQQ C21 H23 SING N N 54 A1IQQ C21 H24 SING N N 55 A1IQQ C21 H25 SING N N 56 A1IQQ C22 H26 SING N N 57 A1IQQ C23 H27 SING N N 58 A1IQQ C23 H28 SING N N 59 A1IQQ C23 H29 SING N N 60 A1IQQ C24 H30 SING N N 61 A1IQQ C24 H31 SING N N 62 A1IQQ O19 H32 SING N N 63 A1IQQ O20 H33 SING N N 64 A1IQQ C28 H34 SING N N 65 A1IQQ C28 H35 SING N N 66 A1IQQ C28 H36 SING N N 67 A1IQQ C29 H37 SING N N 68 A1IQQ C29 H38 SING N N 69 A1IQQ C29 H39 SING N N 70 A1IQQ SI27 H40 SING N N 71 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1IQQ InChI InChI 1.06 "InChI=1S/C26H40O2Si/c1-18(8-7-15-29(4)5)23-12-13-24-20(9-6-14-26(23,24)3)10-11-21-16-22(27)17-25(28)19(21)2/h10-11,18,22-25,27-29H,2,6,8-9,12-14,16-17H2,1,3-5H3/b20-10+,21-11-/t18-,22-,23-,24+,25+,26-/m1/s1" A1IQQ InChIKey InChI 1.06 JVSRRQWNCLSDIH-KPJOBTTESA-N A1IQQ SMILES_CANONICAL CACTVS 3.385 "C[C@H](CC#C[SiH](C)C)[C@H]1CC[C@H]2\C(CCC[C@]12C)=C\C=C3\C[C@@H](O)C[C@H](O)C3=C" A1IQQ SMILES CACTVS 3.385 "C[CH](CC#C[SiH](C)C)[CH]1CC[CH]2C(CCC[C]12C)=CC=C3C[CH](O)C[CH](O)C3=C" A1IQQ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H](CC#C[SiH](C)C)[C@H]1CC[C@@H]\2[C@@]1(CCC/C2=C\C=C/3\C[C@H](C[C@@H](C3=C)O)O)C" A1IQQ SMILES "OpenEye OEToolkits" 2.0.7 "CC(CC#C[SiH](C)C)C1CCC2C1(CCCC2=CC=C3CC(CC(C3=C)O)O)C" # _pdbx_chem_comp_identifier.comp_id A1IQQ _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(1~{R},3~{S},5~{Z})-5-[(2~{E})-2-[(1~{R},3~{a}~{S},7~{a}~{R})-1-[(2~{R})-5-dimethylsilylpent-4-yn-2-yl]-7~{a}-methyl-2,3,3~{a},5,6,7-hexahydro-1~{H}-inden-4-ylidene]ethylidene]-4-methylidene-cyclohexane-1,3-diol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1IQQ "Create component" 2024-10-02 PDBE A1IQQ "Initial release" 2024-12-11 RCSB #