data_A1IR9 # _chem_comp.id A1IR9 _chem_comp.name "2-[[4-[2-(dimethylamino)ethyl-methyl-amino]phenyl]amino]-8-phenyl-pyrido[2,3-d]pyrimidin-7-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H26 N6 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-10-23 _chem_comp.pdbx_modified_date 2026-01-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 414.503 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1IR9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9H47 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1IR9 N1 N1 N 0 1 N N N N N N -50.719 4.039 -13.649 -7.219 1.386 -1.318 N1 A1IR9 1 A1IR9 N3 N2 N 0 1 N N N N N N -53.209 1.611 -19.679 0.163 -1.306 0.229 N3 A1IR9 2 A1IR9 C4 C1 C 0 1 N N N N N N -50.852 1.340 -13.657 -6.068 0.248 0.520 C4 A1IR9 3 A1IR9 C5 C2 C 0 1 N N N N N N -49.398 -0.415 -14.697 -6.097 -2.116 1.442 C5 A1IR9 4 A1IR9 C6 C3 C 0 1 Y N N N N N -51.097 0.772 -16.089 -3.970 -1.059 0.727 C6 A1IR9 5 A1IR9 C7 C4 C 0 1 Y N N N N N -50.870 -0.040 -17.227 -3.295 -2.221 1.081 C7 A1IR9 6 A1IR9 C8 C5 C 0 1 Y N N N N N -51.533 0.197 -18.427 -1.927 -2.302 0.916 C8 A1IR9 7 A1IR9 C10 C6 C 0 1 Y N N N N N -53.057 1.502 -21.010 0.947 -0.181 0.397 C10 A1IR9 8 A1IR9 C13 C7 C 0 1 N N N N N N -52.587 1.074 -25.083 3.302 3.182 0.897 C13 A1IR9 9 A1IR9 C15 C8 C 0 1 N N N N N N -50.594 -0.223 -24.629 5.147 1.837 0.159 C15 A1IR9 10 A1IR9 C17 C9 C 0 1 Y N N N N N -49.051 0.292 -21.632 5.444 -1.365 0.468 C17 A1IR9 11 A1IR9 C20 C10 C 0 1 Y N N N N N -49.190 -2.354 -20.840 5.549 -1.910 -2.245 C20 A1IR9 12 A1IR9 C21 C11 C 0 1 Y N N N N N -50.024 -1.883 -21.839 4.998 -0.722 -1.804 C21 A1IR9 13 A1IR9 C22 C12 C 0 1 Y N N N N N -51.883 0.701 -22.787 3.024 0.801 0.274 C22 A1IR9 14 A1IR9 C24 C13 C 0 1 Y N N N N N -52.041 1.812 -16.243 -3.268 0.018 0.202 C24 A1IR9 15 A1IR9 C1 C14 C 0 1 N N N N N N -51.996 4.457 -13.054 -7.448 1.440 -2.768 C1 A1IR9 16 A1IR9 C2 C15 C 0 1 N N N N N N -49.716 5.064 -13.334 -8.484 1.506 -0.581 C2 A1IR9 17 A1IR9 C3 C16 C 0 1 N N N N N N -50.137 2.656 -13.295 -6.506 0.157 -0.943 C3 A1IR9 18 A1IR9 N2 N3 N 0 1 N N N N N N -50.456 0.579 -14.863 -5.357 -0.977 0.894 N2 A1IR9 19 A1IR9 C9 C17 C 0 1 Y N N N N N -52.463 1.235 -18.533 -1.225 -1.223 0.396 C9 A1IR9 20 A1IR9 N4 N4 N 0 1 Y N N N N N -53.980 2.119 -21.773 0.375 0.939 0.826 N4 A1IR9 21 A1IR9 C11 C18 C 0 1 Y N N N N N -53.860 1.988 -23.082 1.079 2.043 1.003 C11 A1IR9 22 A1IR9 C12 C19 C 0 1 Y N N N N N -52.806 1.262 -23.693 2.451 2.009 0.728 C12 A1IR9 23 A1IR9 C14 C20 C 0 1 N N N N N N -51.541 0.364 -25.535 4.625 3.066 0.609 C14 A1IR9 24 A1IR9 O1 O1 O 0 1 N N N N N N -49.630 -0.845 -25.074 6.338 1.753 -0.089 O1 A1IR9 25 A1IR9 N5 N5 N 0 1 N N N N N N -50.816 -0.041 -23.256 4.370 0.750 0.006 N5 A1IR9 26 A1IR9 C16 C21 C 0 1 Y N N N N N -49.917 -0.573 -22.248 4.938 -0.448 -0.444 C16 A1IR9 27 A1IR9 C18 C22 C 0 1 Y N N N N N -48.196 -0.199 -20.664 6.004 -2.545 0.021 C18 A1IR9 28 A1IR9 C19 C23 C 0 1 Y N N N N N -48.279 -1.510 -20.249 6.056 -2.818 -1.334 C19 A1IR9 29 A1IR9 N6 N6 N 0 1 Y N N N N N -52.013 0.803 -21.467 2.243 -0.261 0.130 N6 A1IR9 30 A1IR9 C23 C24 C 0 1 Y N N N N N -52.693 2.046 -17.426 -1.900 -0.064 0.037 C23 A1IR9 31 A1IR9 H16 H2 H 0 1 N N N N N N -54.062 2.073 -19.436 0.574 -2.153 -0.004 H16 A1IR9 32 A1IR9 H10 H3 H 0 1 N N N N N N -51.919 1.582 -13.773 -5.407 1.105 0.649 H10 A1IR9 33 A1IR9 H9 H4 H 0 1 N N N N N N -50.721 0.663 -12.800 -6.945 0.367 1.156 H9 A1IR9 34 A1IR9 H13 H5 H 0 1 N N N N N N -49.037 -0.397 -13.658 -6.145 -2.029 2.527 H13 A1IR9 35 A1IR9 H12 H6 H 0 1 N N N N N N -49.794 -1.414 -14.930 -7.108 -2.122 1.033 H12 A1IR9 36 A1IR9 H11 H7 H 0 1 N N N N N N -48.566 -0.182 -15.378 -5.590 -3.042 1.173 H11 A1IR9 37 A1IR9 H14 H8 H 0 1 N N N N N N -50.169 -0.859 -17.162 -3.842 -3.060 1.486 H14 A1IR9 38 A1IR9 H15 H9 H 0 1 N N N N N N -51.327 -0.427 -19.284 -1.403 -3.205 1.192 H15 A1IR9 39 A1IR9 H18 H10 H 0 1 N N N N N N -53.276 1.511 -25.791 2.892 4.120 1.242 H18 A1IR9 40 A1IR9 H20 H11 H 0 1 N N N N N N -49.037 1.339 -21.898 5.403 -1.152 1.526 H20 A1IR9 41 A1IR9 H23 H12 H 0 1 N N N N N N -49.255 -3.385 -20.524 5.591 -2.125 -3.302 H23 A1IR9 42 A1IR9 H24 H13 H 0 1 N N N N N N -50.753 -2.538 -22.294 4.601 -0.013 -2.516 H24 A1IR9 43 A1IR9 H26 H14 H 0 1 N N N N N N -52.257 2.447 -15.396 -3.793 0.919 -0.078 H26 A1IR9 44 A1IR9 H1 H15 H 0 1 N N N N N N -52.768 3.705 -13.275 -7.977 2.359 -3.018 H1 A1IR9 45 A1IR9 H2 H16 H 0 1 N N N N N N -51.879 4.552 -11.964 -6.490 1.420 -3.288 H2 A1IR9 46 A1IR9 H3 H17 H 0 1 N N N N N N -52.297 5.427 -13.477 -8.046 0.582 -3.074 H3 A1IR9 47 A1IR9 H5 H18 H 0 1 N N N N N N -50.117 6.058 -13.581 -8.280 1.533 0.490 H5 A1IR9 48 A1IR9 H6 H19 H 0 1 N N N N N N -49.474 5.023 -12.262 -8.992 2.424 -0.877 H6 A1IR9 49 A1IR9 H4 H20 H 0 1 N N N N N N -48.805 4.879 -13.923 -9.120 0.650 -0.808 H4 A1IR9 50 A1IR9 H8 H21 H 0 1 N N N N N N -50.015 2.647 -12.202 -7.167 -0.700 -1.072 H8 A1IR9 51 A1IR9 H7 H22 H 0 1 N N N N N N -49.148 2.609 -13.775 -5.629 0.038 -1.579 H7 A1IR9 52 A1IR9 H17 H23 H 0 1 N N N N N N -54.599 2.455 -23.716 0.607 2.949 1.351 H17 A1IR9 53 A1IR9 H19 H24 H 0 1 N N N N N N -51.409 0.232 -26.599 5.279 3.918 0.724 H19 A1IR9 54 A1IR9 H21 H25 H 0 1 N N N N N N -47.454 0.453 -20.227 6.402 -3.256 0.730 H21 A1IR9 55 A1IR9 H22 H26 H 0 1 N N N N N N -47.632 -1.873 -19.464 6.486 -3.746 -1.680 H22 A1IR9 56 A1IR9 H25 H27 H 0 1 N N N N N N -53.391 2.867 -17.499 -1.354 0.774 -0.372 H25 A1IR9 57 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IR9 C14 C13 DOUB N N 1 A1IR9 C14 C15 SING N N 2 A1IR9 C13 C12 SING N N 3 A1IR9 O1 C15 DOUB N N 4 A1IR9 C15 N5 SING N N 5 A1IR9 C12 C11 DOUB Y N 6 A1IR9 C12 C22 SING Y N 7 A1IR9 N5 C22 SING N N 8 A1IR9 N5 C16 SING N N 9 A1IR9 C11 N4 SING Y N 10 A1IR9 C22 N6 DOUB Y N 11 A1IR9 C16 C21 DOUB Y N 12 A1IR9 C16 C17 SING Y N 13 A1IR9 C21 C20 SING Y N 14 A1IR9 N4 C10 DOUB Y N 15 A1IR9 C17 C18 DOUB Y N 16 A1IR9 N6 C10 SING Y N 17 A1IR9 C10 N3 SING N N 18 A1IR9 C20 C19 DOUB Y N 19 A1IR9 C18 C19 SING Y N 20 A1IR9 N3 C9 SING N N 21 A1IR9 C9 C8 DOUB Y N 22 A1IR9 C9 C23 SING Y N 23 A1IR9 C8 C7 SING Y N 24 A1IR9 C23 C24 DOUB Y N 25 A1IR9 C7 C6 DOUB Y N 26 A1IR9 C24 C6 SING Y N 27 A1IR9 C6 N2 SING N N 28 A1IR9 N2 C5 SING N N 29 A1IR9 N2 C4 SING N N 30 A1IR9 C4 C3 SING N N 31 A1IR9 N1 C2 SING N N 32 A1IR9 N1 C3 SING N N 33 A1IR9 N1 C1 SING N N 34 A1IR9 N3 H16 SING N N 35 A1IR9 C4 H10 SING N N 36 A1IR9 C4 H9 SING N N 37 A1IR9 C5 H13 SING N N 38 A1IR9 C5 H12 SING N N 39 A1IR9 C5 H11 SING N N 40 A1IR9 C7 H14 SING N N 41 A1IR9 C8 H15 SING N N 42 A1IR9 C13 H18 SING N N 43 A1IR9 C17 H20 SING N N 44 A1IR9 C20 H23 SING N N 45 A1IR9 C21 H24 SING N N 46 A1IR9 C24 H26 SING N N 47 A1IR9 C1 H1 SING N N 48 A1IR9 C1 H2 SING N N 49 A1IR9 C1 H3 SING N N 50 A1IR9 C2 H5 SING N N 51 A1IR9 C2 H6 SING N N 52 A1IR9 C2 H4 SING N N 53 A1IR9 C3 H8 SING N N 54 A1IR9 C3 H7 SING N N 55 A1IR9 C11 H17 SING N N 56 A1IR9 C14 H19 SING N N 57 A1IR9 C18 H21 SING N N 58 A1IR9 C19 H22 SING N N 59 A1IR9 C23 H25 SING N N 60 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1IR9 InChI InChI 1.06 "InChI=1S/C24H26N6O/c1-28(2)15-16-29(3)20-12-10-19(11-13-20)26-24-25-17-18-9-14-22(31)30(23(18)27-24)21-7-5-4-6-8-21/h4-14,17H,15-16H2,1-3H3,(H,25,26,27)" A1IR9 InChIKey InChI 1.06 VJLAERWTEIKYGL-UHFFFAOYSA-N A1IR9 SMILES_CANONICAL CACTVS 3.385 "CN(C)CCN(C)c1ccc(Nc2ncc3C=CC(=O)N(c4ccccc4)c3n2)cc1" A1IR9 SMILES CACTVS 3.385 "CN(C)CCN(C)c1ccc(Nc2ncc3C=CC(=O)N(c4ccccc4)c3n2)cc1" A1IR9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN(C)CCN(C)c1ccc(cc1)Nc2ncc3c(n2)N(C(=O)C=C3)c4ccccc4" A1IR9 SMILES "OpenEye OEToolkits" 2.0.7 "CN(C)CCN(C)c1ccc(cc1)Nc2ncc3c(n2)N(C(=O)C=C3)c4ccccc4" # _pdbx_chem_comp_identifier.comp_id A1IR9 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-[[4-[2-(dimethylamino)ethyl-methyl-amino]phenyl]amino]-8-phenyl-pyrido[2,3-d]pyrimidin-7-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1IR9 "Create component" 2024-10-23 PDBE A1IR9 "Initial release" 2026-01-14 RCSB #