data_A1IRD # _chem_comp.id A1IRD _chem_comp.name "4-[5-chloranyl-1-[2-chloranyl-6-(trifluoromethyl)phenyl]carbonyl-indazol-3-yl]-3-(pyrimidin-2-ylmethoxy)benzoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H15 Cl2 F3 N4 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-10-04 _chem_comp.pdbx_modified_date 2025-10-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 587.334 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1IRD _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9GZE _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1IRD N1 N1 N 0 1 Y N N N N N -10.305 -6.690 37.512 0.020 -0.012 0.386 N1 A1IRD 1 A1IRD C2 C1 C 0 1 Y N N N N N -11.517 -11.415 38.821 5.051 0.573 1.263 C2 A1IRD 2 A1IRD O2 O1 O 0 1 N N N N N N -11.434 -13.533 39.811 7.098 1.596 2.127 O2 A1IRD 3 A1IRD N3 N2 N 0 1 Y N N N N N -7.932 -8.754 43.115 2.408 -4.052 -2.115 N3 A1IRD 4 A1IRD C4 C2 C 0 1 Y N N N N N -11.546 -9.302 37.684 3.054 1.870 0.937 C4 A1IRD 5 A1IRD N4 N3 N 0 1 Y N N N N N -9.847 -7.537 43.822 1.611 -4.618 -0.030 N4 A1IRD 6 A1IRD C5 C3 C 0 1 Y N N N N N -10.874 -8.693 38.738 2.394 0.731 0.472 C5 A1IRD 7 A1IRD C6 C4 C 0 1 Y N N N N N -10.645 -7.239 38.678 0.978 0.817 0.051 C6 A1IRD 8 A1IRD N2 N4 N 0 1 Y N N N N N -10.241 -5.333 37.696 -1.185 0.387 -0.202 N2 A1IRD 9 A1IRD O4 O2 O 0 1 N N N N N N -9.909 -8.853 40.885 2.430 -1.603 -0.041 O4 A1IRD 10 A1IRD C7 C5 C 0 1 N N N N N N -9.872 -4.481 36.655 -2.368 -0.243 -0.062 C7 A1IRD 11 A1IRD C8 C6 C 0 1 Y N N N N N -10.027 -4.952 35.252 -3.322 0.200 0.973 C8 A1IRD 12 A1IRD C1 C7 C 0 1 N N N N N N -11.886 -12.864 38.881 6.463 0.493 1.685 C1 A1IRD 13 A1IRD C10 C8 C 0 1 Y N N N N N -11.472 -5.737 33.486 -3.851 1.594 2.859 C10 A1IRD 14 A1IRD C11 C9 C 0 1 Y N N N N N -10.380 -5.833 32.651 -5.113 1.030 2.917 C11 A1IRD 15 A1IRD C12 C10 C 0 1 Y N N N N N -9.110 -5.505 33.100 -5.483 0.051 2.012 C12 A1IRD 16 A1IRD C13 C11 C 0 1 Y N N N N N -8.917 -5.063 34.401 -4.597 -0.368 1.042 C13 A1IRD 17 A1IRD C14 C12 C 0 1 N N N N N N -7.540 -4.713 34.870 -5.003 -1.434 0.057 C14 A1IRD 18 A1IRD C15 C13 C 0 1 Y N N N N N -10.639 -4.991 38.973 -0.970 1.527 -0.947 C15 A1IRD 19 A1IRD C16 C14 C 0 1 Y N N N N N -10.769 -3.754 39.606 -1.794 2.335 -1.723 C16 A1IRD 20 A1IRD C17 C15 C 0 1 Y N N N N N -11.207 -3.751 40.913 -1.272 3.437 -2.361 C17 A1IRD 21 A1IRD C18 C16 C 0 1 Y N N N N N -11.505 -4.955 41.557 0.076 3.753 -2.238 C18 A1IRD 22 A1IRD C19 C17 C 0 1 Y N N N N N -11.378 -6.187 40.946 0.909 2.965 -1.474 C19 A1IRD 23 A1IRD C20 C18 C 0 1 Y N N N N N -10.928 -6.214 39.622 0.393 1.845 -0.821 C20 A1IRD 24 A1IRD C21 C19 C 0 1 Y N N N N N -10.566 -9.469 39.869 3.071 -0.493 0.411 C21 A1IRD 25 A1IRD C22 C20 C 0 1 N N N N N N -10.122 -9.346 42.215 3.213 -2.788 -0.192 C22 A1IRD 26 A1IRD C23 C21 C 0 1 Y N N N N N -9.253 -8.511 43.114 2.369 -3.873 -0.809 C23 A1IRD 27 A1IRD C24 C22 C 0 1 Y N N N N N -7.180 -7.995 43.924 1.680 -4.994 -2.692 C24 A1IRD 28 A1IRD C25 C23 C 0 1 Y N N N N N -7.706 -6.996 44.697 0.870 -5.798 -1.905 C25 A1IRD 29 A1IRD C26 C24 C 0 1 Y N N N N N -9.058 -6.797 44.611 0.856 -5.580 -0.536 C26 A1IRD 30 A1IRD C27 C25 C 0 1 Y N N N N N -10.876 -10.819 39.901 4.393 -0.571 0.805 C27 A1IRD 31 A1IRD C3 C26 C 0 1 Y N N N N N -11.864 -10.648 37.724 4.371 1.793 1.329 C3 A1IRD 32 A1IRD C9 C27 C 0 1 Y N N N N N -11.288 -5.308 34.788 -2.953 1.185 1.893 C9 A1IRD 33 A1IRD F1 F1 F 0 1 N N N N N N -7.324 -5.086 36.138 -6.313 -1.842 0.326 F1 A1IRD 34 A1IRD F2 F2 F 0 1 N N N N N N -7.300 -3.408 34.843 -4.931 -0.921 -1.242 F2 A1IRD 35 A1IRD F3 F3 F 0 1 N N N N N N -6.583 -5.293 34.139 -4.140 -2.529 0.174 F3 A1IRD 36 A1IRD O1 O3 O 0 1 N N N N N N -12.676 -13.296 38.028 7.053 -0.568 1.633 O1 A1IRD 37 A1IRD O3 O4 O 0 1 N N N N N N -9.463 -3.367 36.903 -2.649 -1.176 -0.789 O3 A1IRD 38 A1IRD CL1 CL1 CL 0 0 N N N N N N -12.670 -5.202 35.833 -1.369 1.893 1.823 CL1 A1IRD 39 A1IRD CL2 CL2 CL 0 0 N N N N N N -12.056 -4.887 43.214 0.713 5.147 -3.052 CL2 A1IRD 40 A1IRD H15 H1 H 0 1 N N N N N N -11.784 -14.415 39.766 8.023 1.494 2.392 H15 A1IRD 41 A1IRD H2 H2 H 0 1 N N N N N N -11.824 -8.715 36.821 2.531 2.813 0.988 H2 A1IRD 42 A1IRD H3 H3 H 0 1 N N N N N N -12.458 -5.993 33.129 -3.568 2.355 3.571 H3 A1IRD 43 A1IRD H4 H4 H 0 1 N N N N N N -10.515 -6.168 31.633 -5.812 1.353 3.675 H4 A1IRD 44 A1IRD H5 H5 H 0 1 N N N N N N -8.265 -5.594 32.433 -6.470 -0.385 2.063 H5 A1IRD 45 A1IRD H6 H6 H 0 1 N N N N N N -10.535 -2.834 39.091 -2.843 2.097 -1.825 H6 A1IRD 46 A1IRD H7 H7 H 0 1 N N N N N N -11.320 -2.816 41.441 -1.915 4.062 -2.963 H7 A1IRD 47 A1IRD H8 H8 H 0 1 N N N N N N -11.618 -7.099 41.473 1.956 3.214 -1.381 H8 A1IRD 48 A1IRD H9 H9 H 0 1 N N N N N N -11.179 -9.237 42.498 4.066 -2.580 -0.837 H9 A1IRD 49 A1IRD H10 H10 H 0 1 N N N N N N -9.832 -10.405 42.280 3.568 -3.116 0.785 H10 A1IRD 50 A1IRD H11 H11 H 0 1 N N N N N N -6.117 -8.179 43.968 1.717 -5.135 -3.762 H11 A1IRD 51 A1IRD H12 H12 H 0 1 N N N N N N -7.085 -6.394 45.344 0.265 -6.575 -2.348 H12 A1IRD 52 A1IRD H13 H13 H 0 1 N N N N N N -9.506 -6.012 45.203 0.237 -6.187 0.108 H13 A1IRD 53 A1IRD H14 H14 H 0 1 N N N N N N -10.619 -11.410 40.768 4.917 -1.514 0.758 H14 A1IRD 54 A1IRD H1 H15 H 0 1 N N N N N N -12.386 -11.102 36.894 4.879 2.675 1.687 H1 A1IRD 55 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IRD C11 C12 DOUB Y N 1 A1IRD C11 C10 SING Y N 2 A1IRD C12 C13 SING Y N 3 A1IRD C10 C9 DOUB Y N 4 A1IRD F3 C14 SING N N 5 A1IRD C13 C14 SING N N 6 A1IRD C13 C8 DOUB Y N 7 A1IRD C9 C8 SING Y N 8 A1IRD C9 CL1 SING N N 9 A1IRD F2 C14 SING N N 10 A1IRD C14 F1 SING N N 11 A1IRD C8 C7 SING N N 12 A1IRD C7 O3 DOUB N N 13 A1IRD C7 N2 SING N N 14 A1IRD N1 N2 SING Y N 15 A1IRD N1 C6 DOUB Y N 16 A1IRD C4 C3 DOUB Y N 17 A1IRD C4 C5 SING Y N 18 A1IRD N2 C15 SING Y N 19 A1IRD C3 C2 SING Y N 20 A1IRD O1 C1 DOUB N N 21 A1IRD C6 C5 SING N N 22 A1IRD C6 C20 SING Y N 23 A1IRD C5 C21 DOUB Y N 24 A1IRD C2 C1 SING N N 25 A1IRD C2 C27 DOUB Y N 26 A1IRD C1 O2 SING N N 27 A1IRD C15 C16 DOUB Y N 28 A1IRD C15 C20 SING Y N 29 A1IRD C16 C17 SING Y N 30 A1IRD C20 C19 DOUB Y N 31 A1IRD C21 C27 SING Y N 32 A1IRD C21 O4 SING N N 33 A1IRD O4 C22 SING N N 34 A1IRD C17 C18 DOUB Y N 35 A1IRD C19 C18 SING Y N 36 A1IRD C18 CL2 SING N N 37 A1IRD C22 C23 SING N N 38 A1IRD C23 N3 DOUB Y N 39 A1IRD C23 N4 SING Y N 40 A1IRD N3 C24 SING Y N 41 A1IRD N4 C26 DOUB Y N 42 A1IRD C24 C25 DOUB Y N 43 A1IRD C26 C25 SING Y N 44 A1IRD O2 H15 SING N N 45 A1IRD C4 H2 SING N N 46 A1IRD C10 H3 SING N N 47 A1IRD C11 H4 SING N N 48 A1IRD C12 H5 SING N N 49 A1IRD C16 H6 SING N N 50 A1IRD C17 H7 SING N N 51 A1IRD C19 H8 SING N N 52 A1IRD C22 H9 SING N N 53 A1IRD C22 H10 SING N N 54 A1IRD C24 H11 SING N N 55 A1IRD C25 H12 SING N N 56 A1IRD C26 H13 SING N N 57 A1IRD C27 H14 SING N N 58 A1IRD C3 H1 SING N N 59 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1IRD InChI InChI 1.06 "InChI=1S/C27H15Cl2F3N4O4/c28-15-6-8-20-17(12-15)24(35-36(20)25(37)23-18(27(30,31)32)3-1-4-19(23)29)16-7-5-14(26(38)39)11-21(16)40-13-22-33-9-2-10-34-22/h1-12H,13H2,(H,38,39)" A1IRD InChIKey InChI 1.06 RDQDRNZBJPMAKJ-UHFFFAOYSA-N A1IRD SMILES_CANONICAL CACTVS 3.385 "OC(=O)c1ccc(c(OCc2ncccn2)c1)c3nn(C(=O)c4c(Cl)cccc4C(F)(F)F)c5ccc(Cl)cc35" A1IRD SMILES CACTVS 3.385 "OC(=O)c1ccc(c(OCc2ncccn2)c1)c3nn(C(=O)c4c(Cl)cccc4C(F)(F)F)c5ccc(Cl)cc35" A1IRD SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(c(c(c1)Cl)C(=O)n2c3ccc(cc3c(n2)c4ccc(cc4OCc5ncccn5)C(=O)O)Cl)C(F)(F)F" A1IRD SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(c(c(c1)Cl)C(=O)n2c3ccc(cc3c(n2)c4ccc(cc4OCc5ncccn5)C(=O)O)Cl)C(F)(F)F" # _pdbx_chem_comp_identifier.comp_id A1IRD _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "4-[5-chloranyl-1-[2-chloranyl-6-(trifluoromethyl)phenyl]carbonyl-indazol-3-yl]-3-(pyrimidin-2-ylmethoxy)benzoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1IRD "Create component" 2024-10-04 PDBE A1IRD "Initial release" 2025-10-15 RCSB #