data_A1IRL # _chem_comp.id A1IRL _chem_comp.name "[(2~{R})-1-[[(2~{R})-1-[(3,4-dichlorophenyl)amino]-3-methyl-1-oxidanylidene-butan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]phosphonic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H25 Cl2 N2 O5 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-10-09 _chem_comp.pdbx_modified_date 2025-06-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 439.271 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1IRL _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9H0Y _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1IRL C1 C1 C 0 1 Y N N N N N -0.250 -6.654 23.236 3.169 1.081 -0.205 C1 A1IRL 1 A1IRL C2 C2 C 0 1 Y N N N N N -1.622 -6.733 23.082 4.396 1.653 0.067 C2 A1IRL 2 A1IRL C3 C3 C 0 1 Y N N N N N -2.363 -5.583 22.863 5.540 0.874 0.062 C3 A1IRL 3 A1IRL C4 C4 C 0 1 Y N N N N N -1.727 -4.354 22.788 5.458 -0.480 -0.215 C4 A1IRL 4 A1IRL C5 C5 C 0 1 Y N N N N N -0.360 -4.266 22.952 4.231 -1.057 -0.488 C5 A1IRL 5 A1IRL C6 C6 C 0 1 Y N N N N N 0.382 -5.420 23.178 3.082 -0.278 -0.478 C6 A1IRL 6 A1IRL C10 C7 C 0 1 N N N N N N 3.459 -6.170 26.271 -0.316 -2.363 1.750 C10 A1IRL 7 A1IRL C11 C8 C 0 1 N N N N N N 5.621 -4.930 26.063 -2.023 -3.084 0.074 C11 A1IRL 8 A1IRL C12 C9 C 0 1 N N N N N N 5.279 -4.632 22.091 -2.909 -0.320 -0.321 C12 A1IRL 9 A1IRL C13 C10 C 0 1 N N R N N N 5.997 -3.409 21.520 -4.008 0.528 0.265 C13 A1IRL 10 A1IRL C14 C11 C 0 1 N N N N N N 7.297 -4.014 20.968 -4.052 1.876 -0.457 C14 A1IRL 11 A1IRL C15 C12 C 0 1 N N N N N N 8.124 -4.840 21.950 -2.790 2.674 -0.125 C15 A1IRL 12 A1IRL C16 C13 C 0 1 N N N N N N 8.604 -4.006 23.116 -2.743 3.937 -0.987 C16 A1IRL 13 A1IRL C17 C14 C 0 1 N N N N N N 9.311 -5.463 21.192 -2.809 3.066 1.354 C17 A1IRL 14 A1IRL C7 C15 C 0 1 N N N N N N 2.844 -5.784 23.621 0.738 -0.438 -0.101 C7 A1IRL 15 A1IRL C8 C16 C 0 1 N N R N N N 3.937 -4.843 24.129 -0.595 -1.083 -0.378 C8 A1IRL 16 A1IRL C9 C17 C 0 1 N N N N N N 4.143 -4.943 25.661 -0.631 -2.475 0.257 C9 A1IRL 17 A1IRL N1 N1 N 0 1 N N N N N N 1.735 -5.082 23.348 1.839 -0.859 -0.754 N1 A1IRL 18 A1IRL N2 N2 N 0 1 N N N N N N 5.184 -4.647 23.424 -1.664 -0.259 0.192 N2 A1IRL 19 A1IRL O1 O1 O 0 1 N N N N N N 2.958 -7.013 23.626 0.821 0.459 0.711 O1 A1IRL 20 A1IRL O2 O2 O 0 1 N N N N N N 4.013 -1.706 21.073 -5.519 -1.794 0.711 O2 A1IRL 21 A1IRL O3 O3 O 0 1 N N N N N N 6.209 -1.222 19.909 -6.763 0.520 0.798 O3 A1IRL 22 A1IRL O4 O4 O 0 1 N N N N N N 4.723 -3.130 19.159 -5.924 -0.440 -1.380 O4 A1IRL 23 A1IRL O5 O5 O 0 1 N N N N N N 4.934 -5.569 21.374 -3.144 -1.057 -1.255 O5 A1IRL 24 A1IRL P1 P1 P 0 1 N N N N N N 5.209 -2.323 20.317 -5.607 -0.324 0.061 P1 A1IRL 25 A1IRL CL1 CL1 CL 0 0 N N N N N N -4.086 -5.700 22.718 7.082 1.596 0.404 CL1 A1IRL 26 A1IRL CL2 CL2 CL 0 0 N N N N N N -2.616 -2.906 22.441 6.895 -1.454 -0.220 CL2 A1IRL 27 A1IRL H1 H1 H 0 1 N N N N N N 0.328 -7.551 23.401 2.277 1.689 -0.201 H1 A1IRL 28 A1IRL H2 H2 H 0 1 N N N N N N -2.116 -7.692 23.132 4.463 2.708 0.283 H2 A1IRL 29 A1IRL H3 H3 H 0 1 N N N N N N 0.131 -3.305 22.905 4.167 -2.113 -0.705 H3 A1IRL 30 A1IRL H10 H4 H 0 1 N N N N N N 3.638 -6.189 27.356 -1.058 -1.725 2.231 H10 A1IRL 31 A1IRL H9 H5 H 0 1 N N N N N N 2.377 -6.120 26.079 -0.342 -3.354 2.202 H9 A1IRL 32 A1IRL H8 H6 H 0 1 N N N N N N 3.870 -7.083 25.816 0.675 -1.929 1.881 H8 A1IRL 33 A1IRL H12 H7 H 0 1 N N N N N N 5.705 -5.003 27.157 -2.261 -3.133 -0.989 H12 A1IRL 34 A1IRL H13 H8 H 0 1 N N N N N N 6.135 -5.784 25.598 -2.038 -4.088 0.496 H13 A1IRL 35 A1IRL H11 H9 H 0 1 N N N N N N 6.085 -3.993 25.722 -2.760 -2.464 0.583 H11 A1IRL 36 A1IRL H14 H10 H 0 1 N N N N N N 6.265 -2.754 22.362 -3.816 0.690 1.326 H14 A1IRL 37 A1IRL H16 H11 H 0 1 N N N N N N 7.032 -4.665 20.122 -4.105 1.711 -1.533 H16 A1IRL 38 A1IRL H15 H12 H 0 1 N N N N N N 7.928 -3.186 20.611 -4.931 2.434 -0.131 H15 A1IRL 39 A1IRL H17 H13 H 0 1 N N N N N N 7.494 -5.655 22.336 -1.910 2.063 -0.328 H17 A1IRL 40 A1IRL H18 H14 H 0 1 N N N N N N 9.194 -4.635 23.799 -3.623 4.548 -0.784 H18 A1IRL 41 A1IRL H20 H15 H 0 1 N N N N N N 9.230 -3.182 22.744 -1.844 4.506 -0.751 H20 A1IRL 42 A1IRL H19 H16 H 0 1 N N N N N N 7.737 -3.594 23.654 -2.730 3.658 -2.040 H19 A1IRL 43 A1IRL H22 H17 H 0 1 N N N N N N 9.917 -6.062 21.888 -3.738 3.590 1.579 H22 A1IRL 44 A1IRL H21 H18 H 0 1 N N N N N N 8.933 -6.109 20.386 -2.738 2.169 1.969 H21 A1IRL 45 A1IRL H23 H19 H 0 1 N N N N N N 9.931 -4.663 20.761 -1.963 3.720 1.567 H23 A1IRL 46 A1IRL H5 H20 H 0 1 N N N N N N 3.452 -3.861 24.033 -0.740 -1.171 -1.455 H5 A1IRL 47 A1IRL H7 H21 H 0 1 N N N N N N 3.676 -4.053 26.108 0.111 -3.112 -0.224 H7 A1IRL 48 A1IRL H4 H22 H 0 1 N N N N N N 1.909 -4.103 23.242 1.770 -1.565 -1.416 H4 A1IRL 49 A1IRL H6 H23 H 0 1 N N N N N N 6.017 -4.516 23.961 -1.476 0.331 0.939 H6 A1IRL 50 A1IRL H24 H24 H 0 1 N N N N N N 3.203 -1.964 20.649 -4.842 -2.359 0.314 H24 A1IRL 51 A1IRL H25 H25 H 0 1 N N N N N N 6.345 -1.250 18.969 -6.925 1.390 0.407 H25 A1IRL 52 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IRL O4 P1 DOUB N N 1 A1IRL O3 P1 SING N N 2 A1IRL P1 O2 SING N N 3 A1IRL P1 C13 SING N N 4 A1IRL C14 C13 SING N N 5 A1IRL C14 C15 SING N N 6 A1IRL C17 C15 SING N N 7 A1IRL O5 C12 DOUB N N 8 A1IRL C13 C12 SING N N 9 A1IRL C15 C16 SING N N 10 A1IRL C12 N2 SING N N 11 A1IRL CL2 C4 SING N N 12 A1IRL CL1 C3 SING N N 13 A1IRL C4 C3 DOUB Y N 14 A1IRL C4 C5 SING Y N 15 A1IRL C3 C2 SING Y N 16 A1IRL C5 C6 DOUB Y N 17 A1IRL C2 C1 DOUB Y N 18 A1IRL C6 C1 SING Y N 19 A1IRL C6 N1 SING N N 20 A1IRL N1 C7 SING N N 21 A1IRL N2 C8 SING N N 22 A1IRL C7 O1 DOUB N N 23 A1IRL C7 C8 SING N N 24 A1IRL C8 C9 SING N N 25 A1IRL C9 C11 SING N N 26 A1IRL C9 C10 SING N N 27 A1IRL C1 H1 SING N N 28 A1IRL C2 H2 SING N N 29 A1IRL C5 H3 SING N N 30 A1IRL C10 H10 SING N N 31 A1IRL C10 H9 SING N N 32 A1IRL C10 H8 SING N N 33 A1IRL C11 H12 SING N N 34 A1IRL C11 H13 SING N N 35 A1IRL C11 H11 SING N N 36 A1IRL C13 H14 SING N N 37 A1IRL C14 H16 SING N N 38 A1IRL C14 H15 SING N N 39 A1IRL C15 H17 SING N N 40 A1IRL C16 H18 SING N N 41 A1IRL C16 H20 SING N N 42 A1IRL C16 H19 SING N N 43 A1IRL C17 H22 SING N N 44 A1IRL C17 H21 SING N N 45 A1IRL C17 H23 SING N N 46 A1IRL C8 H5 SING N N 47 A1IRL C9 H7 SING N N 48 A1IRL N1 H4 SING N N 49 A1IRL N2 H6 SING N N 50 A1IRL O2 H24 SING N N 51 A1IRL O3 H25 SING N N 52 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1IRL InChI InChI 1.06 "InChI=1S/C17H25Cl2N2O5P/c1-9(2)7-14(27(24,25)26)16(22)21-15(10(3)4)17(23)20-11-5-6-12(18)13(19)8-11/h5-6,8-10,14-15H,7H2,1-4H3,(H,20,23)(H,21,22)(H2,24,25,26)/t14-,15-/m1/s1" A1IRL InChIKey InChI 1.06 MGOFXJKMSWJECR-HUUCEWRRSA-N A1IRL SMILES_CANONICAL CACTVS 3.385 "CC(C)C[C@H](C(=O)N[C@H](C(C)C)C(=O)Nc1ccc(Cl)c(Cl)c1)[P](O)(O)=O" A1IRL SMILES CACTVS 3.385 "CC(C)C[CH](C(=O)N[CH](C(C)C)C(=O)Nc1ccc(Cl)c(Cl)c1)[P](O)(O)=O" A1IRL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@H](C(=O)N[C@H](C(C)C)C(=O)Nc1ccc(c(c1)Cl)Cl)P(=O)(O)O" A1IRL SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)CC(C(=O)NC(C(C)C)C(=O)Nc1ccc(c(c1)Cl)Cl)P(=O)(O)O" # _pdbx_chem_comp_identifier.comp_id A1IRL _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(2~{R})-1-[[(2~{R})-1-[(3,4-dichlorophenyl)amino]-3-methyl-1-oxidanylidene-butan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]phosphonic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1IRL "Create component" 2024-10-09 PDBE A1IRL "Initial release" 2025-06-18 RCSB #