data_A1IRR # _chem_comp.id A1IRR _chem_comp.name "(2~{S},5~{R})-5-(4-methylphenyl)-1-[2-[[(2~{S})-3-phenyl-2-sulfanyl-propanoyl]amino]ethanoyl]pyrrolidine-2-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H26 N2 O4 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-10-09 _chem_comp.pdbx_modified_date 2025-04-11 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 426.529 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1IRR _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9H1B _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1IRR C02 C1 C 0 1 N N N N N N -0.483 16.547 22.311 2.169 -1.087 -0.033 C02 A1IRR 1 A1IRR C04 C2 C 0 1 N N N N N N -0.855 18.443 20.864 -0.246 -1.355 0.148 C04 A1IRR 2 A1IRR C05 C3 C 0 1 N N N N N N -0.421 17.780 19.507 -1.407 -0.654 0.806 C05 A1IRR 3 A1IRR C07 C4 C 0 1 N N S N N N -1.076 17.210 17.192 -3.029 -2.340 -0.108 C07 A1IRR 4 A1IRR C08 C5 C 0 1 N N N N N N 0.249 17.786 16.707 -3.222 -1.992 -1.561 C08 A1IRR 5 A1IRR C11 C6 C 0 1 N N N N N N -2.263 17.633 16.274 -4.364 -2.813 0.519 C11 A1IRR 6 A1IRR C12 C7 C 0 1 N N N N N N -3.461 17.725 17.285 -5.055 -1.461 0.838 C12 A1IRR 7 A1IRR C13 C8 C 0 1 N N R N N N -2.888 18.176 18.486 -3.873 -0.557 1.247 C13 A1IRR 8 A1IRR C14 C9 C 0 1 Y N N N N N -3.198 19.650 18.589 -4.086 0.837 0.714 C14 A1IRR 9 A1IRR C15 C10 C 0 1 Y N N N N N -4.469 19.987 19.064 -4.952 1.699 1.360 C15 A1IRR 10 A1IRR C16 C11 C 0 1 Y N N N N N -4.841 21.330 19.170 -5.148 2.977 0.871 C16 A1IRR 11 A1IRR C17 C12 C 0 1 Y N N N N N -3.925 22.313 18.827 -4.477 3.393 -0.264 C17 A1IRR 12 A1IRR C18 C13 C 0 1 N N N N N N -4.363 23.787 18.945 -4.691 4.787 -0.797 C18 A1IRR 13 A1IRR C19 C14 C 0 1 Y N N N N N -2.658 21.973 18.338 -3.610 2.532 -0.909 C19 A1IRR 14 A1IRR C20 C15 C 0 1 Y N N N N N -2.285 20.631 18.225 -3.411 1.255 -0.417 C20 A1IRR 15 A1IRR C22 C16 C 0 1 N N S N N N 0.146 15.836 23.503 3.444 -0.346 0.276 C22 A1IRR 16 A1IRR C24 C17 C 0 1 N N N N N N 0.603 14.468 23.008 4.380 -0.416 -0.932 C24 A1IRR 17 A1IRR C25 C18 C 0 1 Y N N N N N 1.650 13.782 23.952 5.602 0.426 -0.670 C25 A1IRR 18 A1IRR C26 C19 C 0 1 Y N N N N N 2.958 14.210 23.939 5.610 1.762 -1.027 C26 A1IRR 19 A1IRR C27 C20 C 0 1 Y N N N N N 3.904 13.602 24.764 6.731 2.535 -0.787 C27 A1IRR 20 A1IRR C28 C21 C 0 1 Y N N N N N 3.517 12.582 25.611 7.844 1.972 -0.191 C28 A1IRR 21 A1IRR C29 C22 C 0 1 Y N N N N N 2.191 12.162 25.643 7.836 0.636 0.165 C29 A1IRR 22 A1IRR C30 C23 C 0 1 Y N N N N N 1.249 12.762 24.811 6.713 -0.135 -0.069 C30 A1IRR 23 A1IRR N03 N1 N 0 1 N N N N N N -0.147 17.909 22.012 0.994 -0.638 0.453 N03 A1IRR 24 A1IRR N06 N2 N 0 1 N N N N N N -1.369 17.729 18.393 -2.656 -1.138 0.662 N06 A1IRR 25 A1IRR O01 O1 O 0 1 N N N N N N -1.325 15.984 21.676 2.198 -2.083 -0.723 O01 A1IRR 26 A1IRR O09 O2 O 0 1 N N N N N N 0.973 17.127 15.920 -2.895 -2.881 -2.513 O09 A1IRR 27 A1IRR O10 O3 O 0 1 N N N N N N 0.628 18.946 17.077 -3.672 -0.914 -1.870 O10 A1IRR 28 A1IRR O21 O4 O 0 1 N N N N N N 0.696 17.339 19.366 -1.216 0.346 1.465 O21 A1IRR 29 A1IRR S23 S1 S 0 1 N N N N N N -1.271 15.878 24.596 4.252 -1.105 1.712 S23 A1IRR 30 A1IRR H042 H1 H 0 0 N N N N N N -1.932 18.273 21.007 -0.178 -2.376 0.524 H042 A1IRR 31 A1IRR H041 H2 H 0 0 N N N N N N -0.659 19.524 20.804 -0.398 -1.375 -0.931 H041 A1IRR 32 A1IRR H071 H3 H 0 0 N N N N N N -1.013 16.112 17.215 -2.266 -3.110 -0.001 H071 A1IRR 33 A1IRR H112 H4 H 0 0 N N N N N N -2.070 18.605 15.798 -4.949 -3.391 -0.198 H112 A1IRR 34 A1IRR H111 H5 H 0 0 N N N N N N -2.455 16.877 15.499 -4.188 -3.386 1.429 H111 A1IRR 35 A1IRR H122 H6 H 0 0 N N N N N N -4.217 18.439 16.925 -5.556 -1.065 -0.046 H122 A1IRR 36 A1IRR H121 H7 H 0 0 N N N N N N -3.926 16.738 17.425 -5.761 -1.573 1.661 H121 A1IRR 37 A1IRR H131 H8 H 0 0 N N N N N N -3.341 17.657 19.344 -3.786 -0.529 2.333 H131 A1IRR 38 A1IRR H151 H9 H 0 0 N N N N N N -5.163 19.210 19.349 -5.476 1.374 2.247 H151 A1IRR 39 A1IRR H161 H10 H 0 0 N N N N N N -5.829 21.599 19.514 -5.825 3.651 1.376 H161 A1IRR 40 A1IRR H183 H11 H 0 0 N N N N N N -4.107 24.167 19.945 -3.968 5.464 -0.342 H183 A1IRR 41 A1IRR H182 H12 H 0 0 N N N N N N -3.845 24.386 18.181 -4.558 4.786 -1.878 H182 A1IRR 42 A1IRR H181 H13 H 0 0 N N N N N N -5.450 23.860 18.793 -5.701 5.117 -0.554 H181 A1IRR 43 A1IRR H191 H14 H 0 0 N N N N N N -1.967 22.750 18.047 -3.086 2.857 -1.796 H191 A1IRR 44 A1IRR H201 H15 H 0 0 N N N N N N -1.304 20.362 17.861 -2.731 0.583 -0.920 H201 A1IRR 45 A1IRR H221 H16 H 0 0 N N N N N N 0.965 16.415 23.955 3.214 0.697 0.497 H221 A1IRR 46 A1IRR H242 H17 H 0 0 N N N N N N -0.278 13.813 22.930 4.681 -1.450 -1.099 H242 A1IRR 47 A1IRR H241 H18 H 0 0 N N N N N N 1.058 14.591 22.014 3.863 -0.041 -1.815 H241 A1IRR 48 A1IRR H261 H19 H 0 0 N N N N N N 3.253 15.019 23.288 4.741 2.202 -1.493 H261 A1IRR 49 A1IRR H271 H20 H 0 0 N N N N N N 4.934 13.927 24.741 6.738 3.578 -1.066 H271 A1IRR 50 A1IRR H281 H21 H 0 0 N N N N N N 4.247 12.108 26.251 8.720 2.575 -0.004 H281 A1IRR 51 A1IRR H291 H22 H 0 0 N N N N N N 1.892 11.370 26.314 8.706 0.196 0.631 H291 A1IRR 52 A1IRR H301 H23 H 0 0 N N N N N N 0.218 12.440 24.832 6.705 -1.177 0.214 H301 A1IRR 53 A1IRR H031 H24 H 0 0 N N N N N N 0.512 18.440 22.544 0.970 0.159 1.005 H031 A1IRR 54 A1IRR H1 H25 H 0 1 N N N N N N 1.749 17.631 15.705 -3.037 -2.613 -3.431 H1 A1IRR 55 A1IRR H231 H26 H 0 0 N N N N N N -2.259 15.964 23.755 4.473 -2.367 1.302 H231 A1IRR 56 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IRR C02 O01 DOUB N N 1 A1IRR C04 N03 SING N N 2 A1IRR C05 C04 SING N N 3 A1IRR C07 N06 SING N N 4 A1IRR O09 C08 SING N N 5 A1IRR O10 C08 DOUB N N 6 A1IRR C08 C07 SING N N 7 A1IRR C11 C07 SING N N 8 A1IRR C12 C11 SING N N 9 A1IRR C13 C12 SING N N 10 A1IRR C14 C13 SING N N 11 A1IRR C15 C14 DOUB Y N 12 A1IRR C16 C15 SING Y N 13 A1IRR C17 C16 DOUB Y N 14 A1IRR C18 C17 SING N N 15 A1IRR C19 C17 SING Y N 16 A1IRR C20 C19 DOUB Y N 17 A1IRR N06 C05 SING N N 18 A1IRR O21 C05 DOUB N N 19 A1IRR N03 C02 SING N N 20 A1IRR C22 C02 SING N N 21 A1IRR S23 C22 SING N N 22 A1IRR C24 C22 SING N N 23 A1IRR C25 C24 SING N N 24 A1IRR C26 C25 DOUB Y N 25 A1IRR C27 C26 SING Y N 26 A1IRR C28 C27 DOUB Y N 27 A1IRR C29 C28 SING Y N 28 A1IRR C30 C29 DOUB Y N 29 A1IRR N06 C13 SING N N 30 A1IRR C14 C20 SING Y N 31 A1IRR C25 C30 SING Y N 32 A1IRR C04 H042 SING N N 33 A1IRR C04 H041 SING N N 34 A1IRR C07 H071 SING N N 35 A1IRR C11 H112 SING N N 36 A1IRR C11 H111 SING N N 37 A1IRR C12 H122 SING N N 38 A1IRR C12 H121 SING N N 39 A1IRR C13 H131 SING N N 40 A1IRR C15 H151 SING N N 41 A1IRR C16 H161 SING N N 42 A1IRR C18 H183 SING N N 43 A1IRR C18 H182 SING N N 44 A1IRR C18 H181 SING N N 45 A1IRR C19 H191 SING N N 46 A1IRR C20 H201 SING N N 47 A1IRR C22 H221 SING N N 48 A1IRR C24 H242 SING N N 49 A1IRR C24 H241 SING N N 50 A1IRR C26 H261 SING N N 51 A1IRR C27 H271 SING N N 52 A1IRR C28 H281 SING N N 53 A1IRR C29 H291 SING N N 54 A1IRR C30 H301 SING N N 55 A1IRR N03 H031 SING N N 56 A1IRR O09 H1 SING N N 57 A1IRR S23 H231 SING N N 58 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1IRR InChI InChI 1.06 "InChI=1S/C23H26N2O4S/c1-15-7-9-17(10-8-15)18-11-12-19(23(28)29)25(18)21(26)14-24-22(27)20(30)13-16-5-3-2-4-6-16/h2-10,18-20,30H,11-14H2,1H3,(H,24,27)(H,28,29)/t18-,19+,20+/m1/s1" A1IRR InChIKey InChI 1.06 LQAZEFOQORVDKT-AABGKKOBSA-N A1IRR SMILES_CANONICAL CACTVS 3.385 "Cc1ccc(cc1)[C@H]2CC[C@H](N2C(=O)CNC(=O)[C@@H](S)Cc3ccccc3)C(O)=O" A1IRR SMILES CACTVS 3.385 "Cc1ccc(cc1)[CH]2CC[CH](N2C(=O)CNC(=O)[CH](S)Cc3ccccc3)C(O)=O" A1IRR SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccc(cc1)[C@H]2CC[C@H](N2C(=O)CNC(=O)[C@H](Cc3ccccc3)S)C(=O)O" A1IRR SMILES "OpenEye OEToolkits" 2.0.7 "Cc1ccc(cc1)C2CCC(N2C(=O)CNC(=O)C(Cc3ccccc3)S)C(=O)O" # _pdbx_chem_comp_identifier.comp_id A1IRR _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S},5~{R})-5-(4-methylphenyl)-1-[2-[[(2~{S})-3-phenyl-2-sulfanyl-propanoyl]amino]ethanoyl]pyrrolidine-2-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1IRR "Create component" 2024-10-09 PDBE A1IRR "Initial release" 2025-04-16 RCSB #