data_A1IRS # _chem_comp.id A1IRS _chem_comp.name "(2~{S})-2-[[(2~{S})-6-azanyl-2-[[(2~{S})-3-phenyl-2-sulfanyl-propanoyl]amino]hexanoyl]amino]-3-(1~{H}-indol-3-yl)propanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H32 N4 O4 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-10-09 _chem_comp.pdbx_modified_date 2025-04-11 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 496.622 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1IRS _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9H1E _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1IRS C02 C1 C 0 1 N N N N N N -13.737 -6.494 19.288 2.023 0.100 0.137 C02 A1IRS 1 A1IRS C04 C2 C 0 1 N N S N N N -14.339 -8.165 21.108 -0.321 0.619 -0.281 C04 A1IRS 2 A1IRS C05 C3 C 0 1 N N N N N N -14.688 -9.676 21.129 -0.389 2.147 -0.260 C05 A1IRS 3 A1IRS C06 C4 C 0 1 N N N N N N -15.047 -10.200 22.520 0.592 2.687 0.783 C06 A1IRS 4 A1IRS C07 C5 C 0 1 N N N N N N -14.972 -11.699 22.625 0.524 4.215 0.804 C07 A1IRS 5 A1IRS C08 C6 C 0 1 N N N N N N -14.962 -12.128 24.101 1.505 4.755 1.847 C08 A1IRS 6 A1IRS C10 C7 C 0 1 N N N N N N -13.096 -7.908 21.947 -1.372 0.082 -1.218 C10 A1IRS 7 A1IRS C12 C8 C 0 1 N N S N N N -12.153 -7.615 24.246 -3.696 -0.175 -1.904 C12 A1IRS 8 A1IRS C13 C9 C 0 1 N N N N N N -11.524 -9.001 24.335 -3.856 0.765 -3.071 C13 A1IRS 9 A1IRS C16 C10 C 0 1 N N N N N N -12.810 -7.301 25.622 -5.028 -0.296 -1.160 C16 A1IRS 10 A1IRS C17 C11 C 0 1 Y N N N N N -13.993 -8.223 25.934 -4.902 -1.328 -0.069 C17 A1IRS 11 A1IRS C18 C12 C 0 1 Y N N N N N -13.921 -9.511 26.464 -5.233 -2.626 -0.156 C18 A1IRS 12 A1IRS C20 C13 C 0 1 Y N N N N N -16.047 -9.146 26.120 -4.462 -2.351 1.936 C20 A1IRS 13 A1IRS C21 C14 C 0 1 Y N N N N N -15.384 -8.006 25.713 -4.389 -1.107 1.285 C21 A1IRS 14 A1IRS C22 C15 C 0 1 Y N N N N N -16.118 -6.927 25.202 -3.894 0.008 1.965 C22 A1IRS 15 A1IRS C23 C16 C 0 1 Y N N N N N -17.510 -7.009 25.124 -3.483 -0.116 3.261 C23 A1IRS 16 A1IRS C24 C17 C 0 1 Y N N N N N -18.177 -8.172 25.518 -3.552 -1.342 3.909 C24 A1IRS 17 A1IRS C25 C18 C 0 1 Y N N N N N -17.461 -9.236 26.035 -4.037 -2.454 3.257 C25 A1IRS 18 A1IRS C27 C19 C 0 1 N N S N N N -13.458 -6.334 17.827 3.385 -0.342 -0.334 C27 A1IRS 19 A1IRS C29 C20 C 0 1 N N N N N N -12.357 -5.325 17.682 4.054 -1.182 0.756 C29 A1IRS 20 A1IRS C30 C21 C 0 1 Y N N N N N -11.311 -5.755 16.647 5.361 -1.725 0.240 C30 A1IRS 21 A1IRS C31 C22 C 0 1 Y N N N N N -10.873 -4.853 15.687 5.395 -2.946 -0.407 C31 A1IRS 22 A1IRS C32 C23 C 0 1 Y N N N N N -9.937 -5.249 14.745 6.594 -3.445 -0.880 C32 A1IRS 23 A1IRS C33 C24 C 0 1 Y N N N N N -9.424 -6.540 14.772 7.760 -2.722 -0.707 C33 A1IRS 24 A1IRS C34 C25 C 0 1 Y N N N N N -9.874 -7.427 15.736 7.726 -1.501 -0.060 C34 A1IRS 25 A1IRS C35 C26 C 0 1 Y N N N N N -10.776 -7.025 16.667 6.525 -0.999 0.408 C35 A1IRS 26 A1IRS N03 N1 N 0 1 N N N N N N -14.022 -7.882 19.738 1.004 0.196 -0.740 N03 A1IRS 27 A1IRS N09 N2 N 0 1 N N N N N N -14.939 -13.580 24.217 1.439 6.222 1.868 N09 A1IRS 28 A1IRS N11 N3 N 0 1 N N N N N N -13.309 -7.685 23.343 -2.674 0.347 -0.993 N11 A1IRS 29 A1IRS N19 N4 N 0 1 Y N N N N N -15.139 -10.032 26.564 -4.979 -3.253 1.033 N19 A1IRS 30 A1IRS O01 O1 O 0 1 N N N N N N -13.712 -5.425 19.860 1.842 0.364 1.307 O01 A1IRS 31 A1IRS O14 O2 O 0 1 N N N N N N -10.507 -9.202 25.039 -3.185 1.768 -3.135 O14 A1IRS 32 A1IRS O15 O3 O 0 1 N N N N N N -11.935 -9.978 23.627 -4.744 0.489 -4.039 O15 A1IRS 33 A1IRS O26 O4 O 0 1 N N N N N N -12.047 -7.942 21.446 -1.046 -0.588 -2.175 O26 A1IRS 34 A1IRS S28 S1 S 0 1 N N N N N N -15.139 -5.689 17.522 4.405 1.117 -0.685 S28 A1IRS 35 A1IRS H041 H1 H 0 0 N N N N N N -15.189 -7.568 21.471 -0.498 0.233 0.723 H041 A1IRS 36 A1IRS H052 H2 H 0 0 N N N N N N -13.819 -10.239 20.758 -0.125 2.536 -1.243 H052 A1IRS 37 A1IRS H051 H3 H 0 0 N N N N N N -15.546 -9.844 20.461 -1.401 2.462 -0.004 H051 A1IRS 38 A1IRS H061 H4 H 0 0 N N N N N N -14.349 -9.763 23.249 0.328 2.297 1.766 H061 A1IRS 39 A1IRS H062 H5 H 0 0 N N N N N N -16.073 -9.883 22.759 1.604 2.372 0.527 H062 A1IRS 40 A1IRS H071 H6 H 0 0 N N N N N N -15.845 -12.142 22.124 0.788 4.604 -0.179 H071 A1IRS 41 A1IRS H072 H7 H 0 0 N N N N N N -14.051 -12.052 22.138 -0.488 4.530 1.060 H072 A1IRS 42 A1IRS H081 H8 H 0 0 N N N N N N -14.069 -11.713 24.591 1.240 4.365 2.830 H081 A1IRS 43 A1IRS H082 H9 H 0 0 N N N N N N -15.865 -11.741 24.595 2.516 4.440 1.592 H082 A1IRS 44 A1IRS H121 H10 H 0 0 N N N N N N -11.424 -6.844 23.956 -3.392 -1.156 -2.267 H121 A1IRS 45 A1IRS H162 H11 H 0 0 N N N N N N -12.052 -7.421 26.410 -5.288 0.667 -0.721 H162 A1IRS 46 A1IRS H161 H12 H 0 0 N N N N N N -13.167 -6.261 25.613 -5.808 -0.599 -1.859 H161 A1IRS 47 A1IRS H181 H13 H 0 0 N N N N N N -13.008 -10.012 26.751 -5.640 -3.105 -1.034 H181 A1IRS 48 A1IRS H221 H14 H 0 0 N N N N N N -15.609 -6.035 24.869 -3.836 0.965 1.467 H221 A1IRS 49 A1IRS H231 H15 H 0 0 N N N N N N -18.076 -6.166 24.756 -3.100 0.746 3.787 H231 A1IRS 50 A1IRS H241 H16 H 0 0 N N N N N N -19.250 -8.240 25.419 -3.223 -1.425 4.934 H241 A1IRS 51 A1IRS H251 H17 H 0 0 N N N N N N -17.972 -10.126 26.371 -4.085 -3.405 3.769 H251 A1IRS 52 A1IRS H271 H18 H 0 0 N N N N N N -13.303 -7.273 17.276 3.280 -0.939 -1.240 H271 A1IRS 53 A1IRS H291 H19 H 0 0 N N N N N N -12.794 -4.366 17.367 4.239 -0.560 1.632 H291 A1IRS 54 A1IRS H292 H20 H 0 0 N N N N N N -11.861 -5.199 18.656 3.399 -2.009 1.030 H292 A1IRS 55 A1IRS H311 H21 H 0 0 N N N N N N -11.261 -3.845 15.674 4.484 -3.511 -0.542 H311 A1IRS 56 A1IRS H321 H22 H 0 0 N N N N N N -9.606 -4.553 13.989 6.621 -4.399 -1.385 H321 A1IRS 57 A1IRS H331 H23 H 0 0 N N N N N N -8.683 -6.848 14.050 8.697 -3.112 -1.076 H331 A1IRS 58 A1IRS H341 H24 H 0 0 N N N N N N -9.506 -8.442 15.747 8.636 -0.936 0.076 H341 A1IRS 59 A1IRS H351 H25 H 0 0 N N N N N N -11.081 -7.715 17.440 6.498 -0.043 0.909 H351 A1IRS 60 A1IRS H031 H26 H 0 0 N N N N N N -13.992 -8.630 19.075 1.149 -0.016 -1.676 H031 A1IRS 61 A1IRS H092 H27 H 0 0 N N N N N N -14.933 -13.838 25.183 2.079 6.603 2.549 H092 A1IRS 62 A1IRS H091 H28 H 0 0 N N N N N N -15.751 -13.962 23.775 1.617 6.605 0.951 H091 A1IRS 63 A1IRS H111 H30 H 0 0 N N N N N N -14.236 -7.578 23.701 -2.935 0.883 -0.228 H111 A1IRS 64 A1IRS H191 H31 H 0 0 N N N N N N -15.348 -10.944 26.916 -5.138 -4.193 1.213 H191 A1IRS 65 A1IRS H2 H32 H 0 1 N N N N N N -11.369 -10.729 23.763 -4.811 1.121 -4.767 H2 A1IRS 66 A1IRS H281 H33 H 0 0 N N N N N N -15.420 -5.119 18.656 4.448 1.748 0.501 H281 A1IRS 67 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IRS C02 O01 DOUB N N 1 A1IRS C04 N03 SING N N 2 A1IRS C06 C05 SING N N 3 A1IRS C07 C06 SING N N 4 A1IRS C08 C07 SING N N 5 A1IRS N09 C08 SING N N 6 A1IRS C05 C04 SING N N 7 A1IRS C10 C04 SING N N 8 A1IRS C12 N11 SING N N 9 A1IRS O14 C13 DOUB N N 10 A1IRS O15 C13 SING N N 11 A1IRS C13 C12 SING N N 12 A1IRS C16 C12 SING N N 13 A1IRS C17 C16 SING N N 14 A1IRS C18 C17 DOUB Y N 15 A1IRS N19 C18 SING Y N 16 A1IRS C20 N19 SING Y N 17 A1IRS C21 C20 DOUB Y N 18 A1IRS C22 C21 SING Y N 19 A1IRS C23 C22 DOUB Y N 20 A1IRS C24 C23 SING Y N 21 A1IRS C25 C24 DOUB Y N 22 A1IRS N11 C10 SING N N 23 A1IRS O26 C10 DOUB N N 24 A1IRS N03 C02 SING N N 25 A1IRS C27 C02 SING N N 26 A1IRS S28 C27 SING N N 27 A1IRS C29 C27 SING N N 28 A1IRS C30 C29 SING N N 29 A1IRS C31 C30 DOUB Y N 30 A1IRS C32 C31 SING Y N 31 A1IRS C33 C32 DOUB Y N 32 A1IRS C34 C33 SING Y N 33 A1IRS C35 C34 DOUB Y N 34 A1IRS C17 C21 SING Y N 35 A1IRS C20 C25 SING Y N 36 A1IRS C30 C35 SING Y N 37 A1IRS C04 H041 SING N N 38 A1IRS C05 H052 SING N N 39 A1IRS C05 H051 SING N N 40 A1IRS C06 H061 SING N N 41 A1IRS C06 H062 SING N N 42 A1IRS C07 H071 SING N N 43 A1IRS C07 H072 SING N N 44 A1IRS C08 H081 SING N N 45 A1IRS C08 H082 SING N N 46 A1IRS C12 H121 SING N N 47 A1IRS C16 H162 SING N N 48 A1IRS C16 H161 SING N N 49 A1IRS C18 H181 SING N N 50 A1IRS C22 H221 SING N N 51 A1IRS C23 H231 SING N N 52 A1IRS C24 H241 SING N N 53 A1IRS C25 H251 SING N N 54 A1IRS C27 H271 SING N N 55 A1IRS C29 H291 SING N N 56 A1IRS C29 H292 SING N N 57 A1IRS C31 H311 SING N N 58 A1IRS C32 H321 SING N N 59 A1IRS C33 H331 SING N N 60 A1IRS C34 H341 SING N N 61 A1IRS C35 H351 SING N N 62 A1IRS N03 H031 SING N N 63 A1IRS N09 H092 SING N N 64 A1IRS N09 H091 SING N N 65 A1IRS N11 H111 SING N N 66 A1IRS N19 H191 SING N N 67 A1IRS O15 H2 SING N N 68 A1IRS S28 H281 SING N N 69 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1IRS InChI InChI 1.06 "InChI=1S/C26H32N4O4S/c27-13-7-6-12-21(29-25(32)23(35)14-17-8-2-1-3-9-17)24(31)30-22(26(33)34)15-18-16-28-20-11-5-4-10-19(18)20/h1-5,8-11,16,21-23,28,35H,6-7,12-15,27H2,(H,29,32)(H,30,31)(H,33,34)/t21-,22-,23-/m0/s1" A1IRS InChIKey InChI 1.06 HDYXNOIOUJSIFC-VABKMULXSA-N A1IRS SMILES_CANONICAL CACTVS 3.385 "NCCCC[C@H](NC(=O)[C@@H](S)Cc1ccccc1)C(=O)N[C@@H](Cc2c[nH]c3ccccc23)C(O)=O" A1IRS SMILES CACTVS 3.385 "NCCCC[CH](NC(=O)[CH](S)Cc1ccccc1)C(=O)N[CH](Cc2c[nH]c3ccccc23)C(O)=O" A1IRS SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)C[C@@H](C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](Cc2c[nH]c3c2cccc3)C(=O)O)S" A1IRS SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)CC(C(=O)NC(CCCCN)C(=O)NC(Cc2c[nH]c3c2cccc3)C(=O)O)S" # _pdbx_chem_comp_identifier.comp_id A1IRS _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S})-2-[[(2~{S})-6-azanyl-2-[[(2~{S})-3-phenyl-2-sulfanyl-propanoyl]amino]hexanoyl]amino]-3-(1~{H}-indol-3-yl)propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1IRS "Create component" 2024-10-09 PDBE A1IRS "Initial release" 2025-04-16 RCSB #