data_A1IS8
#
_chem_comp.id A1IS8
_chem_comp.name "4-[(3~{S})-3-[2-[(3~{R})-3-fluoranylpyrrolidin-1-yl]pyrimidin-4-yl]piperidin-1-yl]carbonyl-1~{H}-pyrrole-2-carbonitrile"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C19 H21 F N6 O"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2024-10-29
_chem_comp.pdbx_modified_date 2025-01-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 368.408
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code A1IS8
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 9H8C
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
_chem_comp.pdbx_pcm ?
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
A1IS8 N1 N1 N 0 1 Y N N N N N 7.816 59.751 51.732 -3.980 1.352 -0.795 N1 A1IS8 1
A1IS8 N3 N2 N 0 1 N N N N N N 5.050 54.362 50.195 2.295 0.567 -0.282 N3 A1IS8 2
A1IS8 C4 C1 C 0 1 Y N N N N N 6.817 59.059 52.309 -3.710 0.399 0.085 C4 A1IS8 3
A1IS8 C5 C2 C 0 1 Y N N N N N 8.046 59.454 50.446 -3.017 1.894 -1.522 C5 A1IS8 4
A1IS8 C6 C3 C 0 1 Y N N N N N 7.337 58.504 49.745 -1.714 1.455 -1.353 C6 A1IS8 5
A1IS8 C7 C4 C 0 1 Y N N N N N 6.330 57.853 50.434 -1.466 0.457 -0.424 C7 A1IS8 6
A1IS8 C8 C5 C 0 1 N N S N N N 5.543 56.710 49.838 -0.064 -0.052 -0.207 C8 A1IS8 7
A1IS8 C10 C6 C 0 1 N N N N N N 4.976 55.213 47.875 1.660 -1.681 -0.988 C10 A1IS8 8
A1IS8 C13 C7 C 0 1 N N N N N N 4.106 53.797 50.971 3.182 1.083 0.592 C13 A1IS8 9
A1IS8 C15 C8 C 0 1 Y N N N N N 3.345 53.433 53.329 5.198 0.235 1.902 C15 A1IS8 10
A1IS8 C17 C9 C 0 1 Y N N N N N 3.921 55.576 52.976 5.356 0.050 -0.333 C17 A1IS8 11
A1IS8 N5 N3 N 0 1 N N N N N N 2.957 57.302 56.001 8.517 -1.390 -1.033 N5 A1IS8 12
A1IS8 C18 C10 C 0 1 N N N N N N 3.161 56.501 55.210 7.624 -0.967 -0.472 C18 A1IS8 13
A1IS8 C16 C11 C 0 1 Y N N N N N 3.394 55.474 54.240 6.499 -0.433 0.234 C16 A1IS8 14
A1IS8 N4 N4 N 0 1 Y N N N N N 3.052 54.162 54.443 6.385 -0.319 1.602 N4 A1IS8 15
A1IS8 C14 C12 C 0 1 Y N N N N N 3.877 54.287 52.376 4.521 0.482 0.724 C14 A1IS8 16
A1IS8 O O1 O 0 1 N N N N N N 3.355 52.922 50.563 2.877 2.044 1.272 O A1IS8 17
A1IS8 C11 C13 C 0 1 N N N N N N 5.245 54.008 48.780 2.674 -0.546 -1.164 C11 A1IS8 18
A1IS8 C9 C14 C 0 1 N N N N N N 5.739 56.462 48.339 0.251 -1.138 -1.239 C9 A1IS8 19
A1IS8 C12 C15 C 0 1 N N N N N N 5.929 55.450 50.618 0.930 1.103 -0.368 C12 A1IS8 20
A1IS8 N2 N5 N 0 1 Y N N N N N 6.030 58.139 51.711 -2.475 -0.043 0.270 N2 A1IS8 21
A1IS8 N N6 N 0 1 N N N N N N 6.615 59.248 53.645 -4.741 -0.147 0.829 N A1IS8 22
A1IS8 C2 C16 C 0 1 N N N N N N 7.324 60.243 54.456 -4.845 -1.604 0.602 C2 A1IS8 23
A1IS8 C1 C17 C 0 1 N N N N N N 6.820 59.962 55.864 -6.359 -1.914 0.704 C1 A1IS8 24
A1IS8 C3 C18 C 0 1 N N N N N N 5.658 58.476 54.436 -6.031 0.475 0.479 C3 A1IS8 25
A1IS8 C C19 C 0 1 N N R N N N 5.472 59.316 55.642 -6.981 -0.659 0.038 C A1IS8 26
A1IS8 F F1 F 0 1 N N N N N N 4.530 60.315 55.326 -8.276 -0.434 0.519 F A1IS8 27
A1IS8 H1 H1 H 0 1 N N N N N N 8.830 59.989 49.931 -3.244 2.670 -2.238 H1 A1IS8 28
A1IS8 H2 H2 H 0 1 N N N N N N 7.556 58.279 48.712 -0.909 1.880 -1.934 H2 A1IS8 29
A1IS8 H3 H3 H 0 1 N N N N N N 4.474 56.902 50.012 0.021 -0.468 0.797 H3 A1IS8 30
A1IS8 H4 H4 H 0 1 N N N N N N 3.898 55.431 47.885 1.879 -2.471 -1.706 H4 A1IS8 31
A1IS8 H5 H5 H 0 1 N N N N N N 5.290 54.965 46.850 1.721 -2.082 0.024 H5 A1IS8 32
A1IS8 H6 H6 H 0 1 N N N N N N 3.189 52.371 53.209 4.833 0.447 2.897 H6 A1IS8 33
A1IS8 H7 H7 H 0 1 N N N N N N 4.302 56.477 52.518 5.135 0.100 -1.388 H7 A1IS8 34
A1IS8 H8 H8 H 0 1 N N N N N N 2.649 53.795 55.281 7.056 -0.594 2.246 H8 A1IS8 35
A1IS8 H9 H9 H 0 1 N N N N N N 4.553 53.195 48.513 2.668 -0.209 -2.200 H9 A1IS8 36
A1IS8 H10 H10 H 0 1 N N N N N N 6.282 53.671 48.632 3.670 -0.900 -0.898 H10 A1IS8 37
A1IS8 H11 H11 H 0 1 N N N N N N 6.811 56.323 48.136 -0.473 -1.946 -1.139 H11 A1IS8 38
A1IS8 H12 H12 H 0 1 N N N N N N 5.371 57.335 47.780 0.196 -0.723 -2.245 H12 A1IS8 39
A1IS8 H13 H13 H 0 1 N N N N N N 6.976 55.187 50.405 0.773 1.832 0.427 H13 A1IS8 40
A1IS8 H14 H14 H 0 1 N N N N N N 5.808 55.628 51.697 0.784 1.578 -1.338 H14 A1IS8 41
A1IS8 H15 H15 H 0 1 N N N N N N 8.413 60.102 54.391 -4.470 -1.862 -0.389 H15 A1IS8 42
A1IS8 H16 H16 H 0 1 N N N N N N 7.067 61.265 54.141 -4.293 -2.148 1.369 H16 A1IS8 43
A1IS8 H17 H17 H 0 1 N N N N N N 7.499 59.279 56.394 -6.611 -2.817 0.147 H17 A1IS8 44
A1IS8 H18 H18 H 0 1 N N N N N N 6.718 60.895 56.437 -6.671 -2.000 1.745 H18 A1IS8 45
A1IS8 H19 H19 H 0 1 N N N N N N 4.710 58.346 53.894 -6.444 0.988 1.348 H19 A1IS8 46
A1IS8 H20 H20 H 0 1 N N N N N N 6.067 57.490 54.700 -5.893 1.182 -0.340 H20 A1IS8 47
A1IS8 H21 H21 H 0 1 N N N N N N 5.175 58.712 56.512 -6.984 -0.759 -1.047 H21 A1IS8 48
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
A1IS8 C10 C9 SING N N 1
A1IS8 C10 C11 SING N N 2
A1IS8 C9 C8 SING N N 3
A1IS8 C11 N3 SING N N 4
A1IS8 C6 C7 DOUB Y N 5
A1IS8 C6 C5 SING Y N 6
A1IS8 C8 C7 SING N N 7
A1IS8 C8 C12 SING N N 8
A1IS8 N3 C12 SING N N 9
A1IS8 N3 C13 SING N N 10
A1IS8 C7 N2 SING Y N 11
A1IS8 C5 N1 DOUB Y N 12
A1IS8 O C13 DOUB N N 13
A1IS8 C13 C14 SING N N 14
A1IS8 N2 C4 DOUB Y N 15
A1IS8 N1 C4 SING Y N 16
A1IS8 C4 N SING N N 17
A1IS8 C14 C17 SING Y N 18
A1IS8 C14 C15 DOUB Y N 19
A1IS8 C17 C16 DOUB Y N 20
A1IS8 C15 N4 SING Y N 21
A1IS8 N C3 SING N N 22
A1IS8 N C2 SING N N 23
A1IS8 C16 N4 SING Y N 24
A1IS8 C16 C18 SING N N 25
A1IS8 C3 C SING N N 26
A1IS8 C2 C1 SING N N 27
A1IS8 C18 N5 TRIP N N 28
A1IS8 F C SING N N 29
A1IS8 C C1 SING N N 30
A1IS8 C5 H1 SING N N 31
A1IS8 C6 H2 SING N N 32
A1IS8 C8 H3 SING N N 33
A1IS8 C10 H4 SING N N 34
A1IS8 C10 H5 SING N N 35
A1IS8 C15 H6 SING N N 36
A1IS8 C17 H7 SING N N 37
A1IS8 N4 H8 SING N N 38
A1IS8 C11 H9 SING N N 39
A1IS8 C11 H10 SING N N 40
A1IS8 C9 H11 SING N N 41
A1IS8 C9 H12 SING N N 42
A1IS8 C12 H13 SING N N 43
A1IS8 C12 H14 SING N N 44
A1IS8 C2 H15 SING N N 45
A1IS8 C2 H16 SING N N 46
A1IS8 C1 H17 SING N N 47
A1IS8 C1 H18 SING N N 48
A1IS8 C3 H19 SING N N 49
A1IS8 C3 H20 SING N N 50
A1IS8 C H21 SING N N 51
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
A1IS8 InChI InChI 1.06 "InChI=1S/C19H21FN6O/c20-15-4-7-26(12-15)19-22-5-3-17(24-19)13-2-1-6-25(11-13)18(27)14-8-16(9-21)23-10-14/h3,5,8,10,13,15,23H,1-2,4,6-7,11-12H2/t13-,15+/m0/s1"
A1IS8 InChIKey InChI 1.06 IFZRSKADNXCPNJ-DZGCQCFKSA-N
A1IS8 SMILES_CANONICAL CACTVS 3.385 "F[C@@H]1CCN(C1)c2nccc(n2)[C@H]3CCCN(C3)C(=O)c4c[nH]c(c4)C#N"
A1IS8 SMILES CACTVS 3.385 "F[CH]1CCN(C1)c2nccc(n2)[CH]3CCCN(C3)C(=O)c4c[nH]c(c4)C#N"
A1IS8 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cnc(nc1[C@H]2CCCN(C2)C(=O)c3cc([nH]c3)C#N)N4CC[C@H](C4)F"
A1IS8 SMILES "OpenEye OEToolkits" 2.0.7 "c1cnc(nc1C2CCCN(C2)C(=O)c3cc([nH]c3)C#N)N4CCC(C4)F"
#
_pdbx_chem_comp_identifier.comp_id A1IS8
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier "4-[(3~{S})-3-[2-[(3~{R})-3-fluoranylpyrrolidin-1-yl]pyrimidin-4-yl]piperidin-1-yl]carbonyl-1~{H}-pyrrole-2-carbonitrile"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
A1IS8 "Create component" 2024-10-29 PDBE
A1IS8 "Initial release" 2025-01-22 RCSB
#