data_A1IT6 # _chem_comp.id A1IT6 _chem_comp.name "[[(2~{R},3~{S},4~{R},5~{R})-5-[2-chloranyl-6-[[4-[1-(2-fluoranylethyl)-1,2,3-triazol-4-yl]phenyl]methyl-propyl-amino]purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]methylphosphonic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H32 Cl F N8 O9 P2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-11-13 _chem_comp.pdbx_modified_date 2025-11-14 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 704.969 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1IT6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9HD5 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1IT6 N1 N1 N 0 1 Y N N N N N 23.423 30.380 -8.232 5.353 3.217 -1.124 N1 A1IT6 1 A1IT6 C2 C1 C 0 1 Y N N N N N 25.576 30.872 -8.288 7.029 2.964 0.227 C2 A1IT6 2 A1IT6 N3 N2 N 0 1 N N N N N N 24.464 32.857 -1.498 2.792 -2.547 2.458 N3 A1IT6 3 A1IT6 C4 C2 C 0 1 Y N N N N N 24.457 30.656 -5.984 4.951 1.592 0.776 C4 A1IT6 4 A1IT6 O5 O1 O 0 1 N N N N N N 20.412 26.170 4.775 -8.373 2.484 2.473 O5 A1IT6 5 A1IT6 C6 C3 C 0 1 Y N N N N N 23.339 31.289 -3.949 2.914 0.375 1.134 C6 A1IT6 6 A1IT6 N7 N3 N 0 1 Y N N N N N 20.659 32.328 1.172 -0.902 -1.844 -0.260 N7 A1IT6 7 A1IT6 C10 C4 C 0 1 N N N N N N 24.564 31.419 -1.744 2.662 -1.210 3.054 C10 A1IT6 8 A1IT6 C12 C5 C 0 1 N N N N N N 24.908 34.451 -3.366 4.651 -3.304 3.861 C12 A1IT6 9 A1IT6 C13 C6 C 0 1 N N N N N N 25.996 34.990 -4.226 6.071 -3.873 3.825 C13 A1IT6 10 A1IT6 C14 C7 C 0 1 Y N N N N N 23.453 33.366 -0.689 2.243 -2.579 1.189 C14 A1IT6 11 A1IT6 C15 C8 C 0 1 Y N N N N N 22.577 35.164 0.411 2.452 -2.999 -1.072 C15 A1IT6 12 A1IT6 C16 C9 C 0 1 Y N N N N N 21.545 33.268 0.711 0.404 -2.256 -0.338 C16 A1IT6 13 A1IT6 C17 C10 C 0 1 Y N N N N N 22.409 32.591 -0.137 0.906 -2.203 0.974 C17 A1IT6 14 A1IT6 C18 C11 C 0 1 Y N N N N N 21.019 31.151 0.568 -1.161 -1.552 1.046 C18 A1IT6 15 A1IT6 C21 C12 C 0 1 N N N N N N 17.456 29.958 3.445 -5.367 -1.044 -1.175 C21 A1IT6 16 A1IT6 C22 C13 C 0 1 N N N N N N 17.950 26.969 4.061 -6.737 2.657 0.200 C22 A1IT6 17 A1IT6 C23 C14 C 0 1 N N S N N N 17.250 31.960 1.872 -3.843 -2.668 -2.342 C23 A1IT6 18 A1IT6 C24 C15 C 0 1 N N R N N N 18.271 33.012 1.417 -2.523 -3.097 -1.656 C24 A1IT6 19 A1IT6 O4 O2 O 0 1 N N N N N N 19.670 25.572 2.453 -9.417 3.012 0.237 O4 A1IT6 20 A1IT6 P1 P1 P 0 1 N N N N N N 19.629 26.612 3.520 -8.220 3.260 1.071 P1 A1IT6 21 A1IT6 O6 O3 O 0 1 N N N N N N 20.192 27.952 2.997 -8.076 4.840 1.346 O6 A1IT6 22 A1IT6 P P2 P 0 1 N N N N N N 17.780 28.175 5.385 -6.900 0.869 -0.111 P A1IT6 23 A1IT6 O2 O4 O 0 1 N N N N N N 18.573 27.947 6.650 -8.202 0.598 -1.018 O2 A1IT6 24 A1IT6 O3 O5 O 0 1 N N N N N N 16.273 28.205 5.782 -7.040 0.154 1.178 O3 A1IT6 25 A1IT6 O1 O6 O 0 1 N N N N N N 18.109 29.529 4.656 -5.590 0.336 -0.880 O1 A1IT6 26 A1IT6 C20 C16 C 0 1 N N R N N N 17.891 31.365 3.118 -4.034 -1.201 -1.909 C20 A1IT6 27 A1IT6 O O7 O 0 1 N N N N N N 19.299 31.386 2.824 -2.949 -0.871 -1.026 O A1IT6 28 A1IT6 O7 O8 O 0 1 N N N N N N 15.962 32.499 2.138 -3.721 -2.758 -3.763 O7 A1IT6 29 A1IT6 O8 O9 O 0 1 N N N N N N 17.952 34.346 1.786 -1.727 -3.892 -2.536 O8 A1IT6 30 A1IT6 C19 C17 C 0 1 N N R N N N 19.569 32.572 2.103 -1.844 -1.732 -1.377 C19 A1IT6 31 A1IT6 N5 N4 N 0 1 Y N N N N N 21.578 34.561 1.025 1.205 -2.657 -1.320 N5 A1IT6 32 A1IT6 CL CL1 CL 0 0 N N N N N N 22.617 36.892 0.615 3.456 -3.515 -2.392 CL A1IT6 33 A1IT6 N4 N5 N 0 1 Y N N N N N 23.512 34.672 -0.387 2.968 -2.966 0.145 N4 A1IT6 34 A1IT6 N6 N6 N 0 1 Y N N N N N 22.053 31.253 -0.230 -0.101 -1.769 1.769 N6 A1IT6 35 A1IT6 C11 C18 C 0 1 N N N N N N 25.454 33.719 -2.158 4.195 -2.980 2.437 C11 A1IT6 36 A1IT6 C7 C19 C 0 1 Y N N N N N 24.479 31.023 -3.200 3.469 -0.222 2.251 C7 A1IT6 37 A1IT6 C5 C20 C 0 1 Y N N N N N 23.326 31.110 -5.322 3.648 1.281 0.395 C5 A1IT6 38 A1IT6 C8 C21 C 0 1 Y N N N N N 25.586 30.511 -3.855 4.763 0.084 2.634 C8 A1IT6 39 A1IT6 C9 C22 C 0 1 Y N N N N N 25.582 30.331 -5.226 5.506 0.988 1.902 C9 A1IT6 40 A1IT6 C3 C23 C 0 1 Y N N N N N 24.514 30.641 -7.454 5.748 2.561 -0.018 C3 A1IT6 41 A1IT6 N2 N7 N 0 1 Y N N N N N 23.770 30.450 -9.497 6.318 3.966 -1.527 N2 A1IT6 42 A1IT6 N N8 N 0 1 Y N N N N N 25.080 30.754 -9.529 7.336 3.846 -0.751 N A1IT6 43 A1IT6 C1 C24 C 0 1 N N N N N N 25.779 30.944 -10.798 8.613 4.548 -0.900 C1 A1IT6 44 A1IT6 C C25 C 0 1 N N N N N N 25.946 32.476 -11.165 9.178 4.288 -2.298 C A1IT6 45 A1IT6 F F1 F 0 1 N N N N N N 26.447 32.583 -12.484 10.398 4.958 -2.440 F A1IT6 46 A1IT6 H1 H1 H 0 1 N N N N N N 26.594 31.100 -8.007 7.667 2.644 1.038 H1 A1IT6 47 A1IT6 H2 H2 H 0 1 N N N N N N 20.779 25.306 4.632 -7.622 2.602 3.072 H2 A1IT6 48 A1IT6 H3 H3 H 0 1 N N N N N N 22.448 31.642 -3.451 1.903 0.132 0.840 H3 A1IT6 49 A1IT6 H4 H4 H 0 1 N N N N N N 23.745 30.921 -1.204 1.614 -0.911 3.051 H4 A1IT6 50 A1IT6 H5 H5 H 0 1 N N N N N N 25.529 31.070 -1.349 3.031 -1.232 4.079 H5 A1IT6 51 A1IT6 H6 H6 H 0 1 N N N N N N 24.280 35.286 -3.022 3.976 -4.039 4.300 H6 A1IT6 52 A1IT6 H7 H7 H 0 1 N N N N N N 24.298 33.753 -3.959 4.639 -2.395 4.462 H7 A1IT6 53 A1IT6 H8 H8 H 0 1 N N N N N N 25.557 35.512 -5.089 6.396 -4.104 4.839 H8 A1IT6 54 A1IT6 H9 H9 H 0 1 N N N N N N 26.608 35.694 -3.644 6.083 -4.782 3.223 H9 A1IT6 55 A1IT6 H10 H10 H 0 1 N N N N N N 26.627 34.162 -4.581 6.746 -3.138 3.385 H10 A1IT6 56 A1IT6 H11 H11 H 0 1 N N N N N N 20.496 30.221 0.735 -2.108 -1.196 1.426 H11 A1IT6 57 A1IT6 H12 H12 H 0 1 N N N N N N 16.365 29.934 3.587 -5.340 -1.614 -0.246 H12 A1IT6 58 A1IT6 H13 H13 H 0 1 N N N N N N 17.734 29.286 2.620 -6.175 -1.416 -1.806 H13 A1IT6 59 A1IT6 H14 H14 H 0 1 N N N N N N 17.390 27.344 3.192 -6.634 3.183 -0.749 H14 A1IT6 60 A1IT6 H15 H15 H 0 1 N N N N N N 17.501 26.026 4.407 -5.855 2.841 0.814 H15 A1IT6 61 A1IT6 H16 H16 H 0 1 N N N N N N 17.183 31.179 1.101 -4.674 -3.280 -1.991 H16 A1IT6 62 A1IT6 H17 H17 H 0 1 N N N N N N 18.400 32.935 0.327 -2.723 -3.630 -0.727 H17 A1IT6 63 A1IT6 H18 H18 H 0 1 N N N N N N 20.457 27.852 2.090 -8.832 5.230 1.808 H18 A1IT6 64 A1IT6 H19 H19 H 0 1 N N N N N N 17.979 27.875 7.388 -8.179 1.037 -1.880 H19 A1IT6 65 A1IT6 H20 H20 H 0 1 N N N N N N 17.675 32.018 3.977 -4.014 -0.551 -2.783 H20 A1IT6 66 A1IT6 H21 H21 H 0 1 N N N N N N 15.378 31.803 2.414 -3.599 -3.659 -4.090 H21 A1IT6 67 A1IT6 H22 H22 H 0 1 N N N N N N 18.629 34.933 1.469 -2.150 -4.717 -2.812 H22 A1IT6 68 A1IT6 H23 H23 H 0 1 N N N N N N 19.868 33.366 2.802 -1.337 -1.366 -2.269 H23 A1IT6 69 A1IT6 H24 H24 H 0 1 N N N N N N 26.299 33.094 -2.482 4.292 -3.868 1.813 H24 A1IT6 70 A1IT6 H25 H25 H 0 1 N N N N N N 25.807 34.464 -1.430 4.815 -2.181 2.030 H25 A1IT6 71 A1IT6 H26 H26 H 0 1 N N N N N N 22.428 31.326 -5.882 3.213 1.747 -0.477 H26 A1IT6 72 A1IT6 H27 H27 H 0 1 N N N N N N 26.466 30.248 -3.287 5.192 -0.386 3.507 H27 A1IT6 73 A1IT6 H28 H28 H 0 1 N N N N N N 26.459 29.934 -5.715 6.516 1.225 2.202 H28 A1IT6 74 A1IT6 H29 H29 H 0 1 N N N N N N 25.206 30.449 -11.596 8.458 5.618 -0.764 H29 A1IT6 75 A1IT6 H30 H30 H 0 1 N N N N N N 26.777 30.486 -10.725 9.317 4.185 -0.151 H30 A1IT6 76 A1IT6 H31 H31 H 0 1 N N N N N N 26.650 32.948 -10.464 9.333 3.218 -2.434 H31 A1IT6 77 A1IT6 H32 H32 H 0 1 N N N N N N 24.970 32.979 -11.099 8.474 4.651 -3.047 H32 A1IT6 78 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IT6 F C SING N N 1 A1IT6 C C1 SING N N 2 A1IT6 C1 N SING N N 3 A1IT6 N N2 SING Y N 4 A1IT6 N C2 SING Y N 5 A1IT6 N2 N1 DOUB Y N 6 A1IT6 C2 C3 DOUB Y N 7 A1IT6 N1 C3 SING Y N 8 A1IT6 C3 C4 SING N N 9 A1IT6 C4 C5 DOUB Y N 10 A1IT6 C4 C9 SING Y N 11 A1IT6 C5 C6 SING Y N 12 A1IT6 C9 C8 DOUB Y N 13 A1IT6 C13 C12 SING N N 14 A1IT6 C6 C7 DOUB Y N 15 A1IT6 C8 C7 SING Y N 16 A1IT6 C12 C11 SING N N 17 A1IT6 C7 C10 SING N N 18 A1IT6 C11 N3 SING N N 19 A1IT6 C10 N3 SING N N 20 A1IT6 N3 C14 SING N N 21 A1IT6 C14 N4 DOUB Y N 22 A1IT6 C14 C17 SING Y N 23 A1IT6 N4 C15 SING Y N 24 A1IT6 N6 C17 SING Y N 25 A1IT6 N6 C18 DOUB Y N 26 A1IT6 C17 C16 DOUB Y N 27 A1IT6 C15 CL SING N N 28 A1IT6 C15 N5 DOUB Y N 29 A1IT6 C18 N7 SING Y N 30 A1IT6 C16 N5 SING Y N 31 A1IT6 C16 N7 SING Y N 32 A1IT6 N7 C19 SING N N 33 A1IT6 C24 O8 SING N N 34 A1IT6 C24 C23 SING N N 35 A1IT6 C24 C19 SING N N 36 A1IT6 C23 O7 SING N N 37 A1IT6 C23 C20 SING N N 38 A1IT6 C19 O SING N N 39 A1IT6 O4 P1 DOUB N N 40 A1IT6 O C20 SING N N 41 A1IT6 O6 P1 SING N N 42 A1IT6 C20 C21 SING N N 43 A1IT6 C21 O1 SING N N 44 A1IT6 P1 C22 SING N N 45 A1IT6 P1 O5 SING N N 46 A1IT6 C22 P SING N N 47 A1IT6 O1 P SING N N 48 A1IT6 P O3 DOUB N N 49 A1IT6 P O2 SING N N 50 A1IT6 C2 H1 SING N N 51 A1IT6 O5 H2 SING N N 52 A1IT6 C6 H3 SING N N 53 A1IT6 C10 H4 SING N N 54 A1IT6 C10 H5 SING N N 55 A1IT6 C12 H6 SING N N 56 A1IT6 C12 H7 SING N N 57 A1IT6 C13 H8 SING N N 58 A1IT6 C13 H9 SING N N 59 A1IT6 C13 H10 SING N N 60 A1IT6 C18 H11 SING N N 61 A1IT6 C21 H12 SING N N 62 A1IT6 C21 H13 SING N N 63 A1IT6 C22 H14 SING N N 64 A1IT6 C22 H15 SING N N 65 A1IT6 C23 H16 SING N N 66 A1IT6 C24 H17 SING N N 67 A1IT6 O6 H18 SING N N 68 A1IT6 O2 H19 SING N N 69 A1IT6 C20 H20 SING N N 70 A1IT6 O7 H21 SING N N 71 A1IT6 O8 H22 SING N N 72 A1IT6 C19 H23 SING N N 73 A1IT6 C11 H24 SING N N 74 A1IT6 C11 H25 SING N N 75 A1IT6 C5 H26 SING N N 76 A1IT6 C8 H27 SING N N 77 A1IT6 C9 H28 SING N N 78 A1IT6 C1 H29 SING N N 79 A1IT6 C1 H30 SING N N 80 A1IT6 C H31 SING N N 81 A1IT6 C H32 SING N N 82 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1IT6 InChI InChI 1.06 "InChI=1S/C25H32ClFN8O9P2/c1-2-8-33(10-15-3-5-16(6-4-15)17-11-34(9-7-27)32-31-17)22-19-23(30-25(26)29-22)35(13-28-19)24-21(37)20(36)18(44-24)12-43-46(41,42)14-45(38,39)40/h3-6,11,13,18,20-21,24,36-37H,2,7-10,12,14H2,1H3,(H,41,42)(H2,38,39,40)/t18-,20-,21-,24-/m1/s1" A1IT6 InChIKey InChI 1.06 HUGOUIYDRYRLCG-UMCMBGNQSA-N A1IT6 SMILES_CANONICAL CACTVS 3.385 "CCCN(Cc1ccc(cc1)c2cn(CCF)nn2)c3nc(Cl)nc4n(cnc34)[C@@H]5O[C@H](CO[P](O)(=O)C[P](O)(O)=O)[C@@H](O)[C@H]5O" A1IT6 SMILES CACTVS 3.385 "CCCN(Cc1ccc(cc1)c2cn(CCF)nn2)c3nc(Cl)nc4n(cnc34)[CH]5O[CH](CO[P](O)(=O)C[P](O)(O)=O)[CH](O)[CH]5O" A1IT6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCN(Cc1ccc(cc1)c2cn(nn2)CCF)c3c4c(nc(n3)Cl)n(cn4)[C@H]5[C@@H]([C@@H]([C@H](O5)COP(=O)(CP(=O)(O)O)O)O)O" A1IT6 SMILES "OpenEye OEToolkits" 2.0.7 "CCCN(Cc1ccc(cc1)c2cn(nn2)CCF)c3c4c(nc(n3)Cl)n(cn4)C5C(C(C(O5)COP(=O)(CP(=O)(O)O)O)O)O" # _pdbx_chem_comp_identifier.comp_id A1IT6 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[[(2~{R},3~{S},4~{R},5~{R})-5-[2-chloranyl-6-[[4-[1-(2-fluoranylethyl)-1,2,3-triazol-4-yl]phenyl]methyl-propyl-amino]purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]methylphosphonic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1IT6 "Create component" 2024-11-13 PDBE A1IT6 "Initial release" 2025-11-19 RCSB #